#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
18GLP|1|S2 (rep)Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)Electron microscopy1.6716722023-04-19
28QOI|1|S2Small subunit ribosomal RNA18S rRNA (1740-MER)Homo sapiensEukaryaRF01960Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNAElectron microscopy1.917402024-06-12
38YOO|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of the human 80S ribosome with 100 um TigecyclineElectron microscopy217192024-07-10
49C3H|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.Electron microscopy216602024-12-04
58YOP|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of the human 80S ribosome with 4 um TigecyclineElectron microscopy2.217402024-07-10
67R4X|1|2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Cryo-EM reconstruction of the human 40S ribosomal subunit - Full mapElectron microscopy2.1516462023-02-22
78K2C|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of the human 80S ribosome with TigecyclineElectron microscopy2.417402024-07-10
88XSX|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2Electron microscopy2.417402024-07-10
98G5Y|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state)Electron microscopy2.2916802023-04-19
108JDK|1|wSmall subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Structure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)Electron microscopy2.2616342023-12-06
117XNY|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cellsElectron microscopy2.517402023-04-05
128PPL|1|A2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960MERS-CoV Nsp1 bound to the human 43S pre-initiation complexElectron microscopy2.6517802023-10-18
138IFE|1|2mSmall subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Arbekacin-added human 80S ribosomeElectron microscopy2.5717422024-02-14
148IFD|1|2mSmall subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Dibekacin-added human 80S ribosomeElectron microscopy2.5917422024-02-14
157MQA|1|L1+ 7MQA|1|L2Small subunit ribosomal RNA + ACEA small nucleolar RNA U318S rRNA, U3 snoRNAHomo sapiensEukaryaRF01960 + RF01848Cryo-EM structure of the human SSU processome, state post-A1Electron microscopy2.718132021-09-22
166ZMI|1|S2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexElectron microscopy2.617402020-08-19
178JDL|1|wSmall subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state)Electron microscopy2.4216342023-12-06
186ZM7|1|S2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexElectron microscopy2.717402020-07-29
197XNX|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cellsElectron microscopy2.717402023-04-05
208G5Z|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)Electron microscopy2.6417012023-04-19
218G60|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)Electron microscopy2.5416542023-04-19
228JDJ|1|wSmall subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Structure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)Electron microscopy2.516342023-12-06
239BKD|1|ASmall subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960The structure of human Pdcd4 bound to the 40S small ribosomal subunitElectron microscopy2.616722024-09-04
248T4S|1|2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960MERS-CoV Nsp1 protein bound to the Human 40S Ribosomal subunitElectron microscopy2.616712023-10-04
256ZXG|1|2Small subunit ribosomal RNApre-18S ribosomal RNAHomo sapiensEukaryaRF01960Cryo-EM structure of a late human pre-40S ribosomal subunit - State H1Electron microscopy2.616512020-12-02
266ZLW|1|2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960SARS-CoV-2 Nsp1 bound to the human 40S ribosomal subunitElectron microscopy2.616652020-07-29
278PJ5|1|ASmall subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Structure of human 48S translation initiation complex after eIF2 release prior 60S subunit joining (48S-5)Electron microscopy2.917542024-08-14
288G6J|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)Electron microscopy2.817012023-04-19
296ZXH|1|2Small subunit ribosomal RNApre-18S ribosomal RNAHomo sapiensEukaryaRF01960Cryo-EM structure of a late human pre-40S ribosomal subunit - State H2Electron microscopy2.716512020-12-16
308JDM|1|wSmall subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state)Electron microscopy2.6716342023-12-06
316ZVH|1|2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960EDF1-ribosome complexElectron microscopy2.917402020-08-19
326Z6N|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)Electron microscopy2.917402020-07-29
338PPK|1|2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Bat-Hp-CoV Nsp1 and eIF1 bound to the human 40S small ribosomal subunitElectron microscopy2.9817712023-10-18
346ZOJ|1|2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960SARS-CoV-2-Nsp1-40S complex, composite mapElectron microscopy2.817042020-07-22
356QZP|1|S2Small subunit ribosomal RNA18S rRNA (1740-MER)Homo sapiensEukaryaRF01960High-resolution cryo-EM structure of the human 80S ribosomeElectron microscopy2.917402019-04-24
366ZP4|1|2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960SARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 2Electron microscopy2.917212020-07-29
378PJ6|1|ASmall subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Structure of human 48S translation initiation complex with initiator tRNA, eIF1A and eIF3 (off-pathway)Electron microscopy2.917192024-08-14
386ZME|1|S2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexElectron microscopy317402020-08-12
396Z6L|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of human CCDC124 bound to 80S ribosomesElectron microscopy317402020-07-29
408XSY|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of the human 80S ribosome with Tigecycline, e-tRNA and CCDC124 (40S head Swivelled)Electron microscopy317402024-07-10
416ZV6|1|2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Human RIO1(kd)-StHA late pre-40S particle, structural state B (post 18S rRNA cleavage)Electron microscopy2.916832021-05-12
426ZON|1|2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960SARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 1Electron microscopy317212020-07-29
438XXL|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of the human 40S ribosome with PDCD4Electron microscopy2.917232024-05-01
448UKB|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960In situ HHT and CHX treated human hibernating state without E-tRNA 80S ribosomeElectron microscopy3.0517402024-11-20
457QVP|1|S2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Human collided disome (di-ribosome) stalled on XBP1 mRNAElectron microscopy317142022-10-12
467K5I|1|2Small subunit ribosomal RNA40S ribosomal rRNA18SHomo sapiensEukaryaRF01960SARS-COV-2 nsp1 in complex with human 40S ribosomeElectron microscopy2.916652020-10-14
478G61|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)Electron microscopy2.9416822023-04-19
487QVP|1|S3Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Human collided disome (di-ribosome) stalled on XBP1 mRNAElectron microscopy317052022-10-12
496ZMO|1|S2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complexElectron microscopy3.117402020-08-19
506Z6M|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1Electron microscopy3.117402020-07-29
516XA1|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Structure of a drug-like compound stalled human translation termination complexElectron microscopy2.815902020-10-07
528PJ4|1|ASmall subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Structure of human 48S translation initiation complex after eIF5 release (48S-4)Electron microscopy3.217542024-08-14
538XSZ|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA and P-tRNAElectron microscopy3.217402024-07-10
548XP2|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of the human 40S ribosome with LARP1Electron microscopy3.217402024-11-20
556ZXE|1|2Small subunit ribosomal RNApre-18S ribosomal RNAHomo sapiensEukaryaRF01960Cryo-EM structure of a late human pre-40S ribosomal subunit - State F2Electron microscopy316452020-12-02
566OM0|1|S2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAsElectron microscopy3.117142019-06-19
576OLE|1|S2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAsElectron microscopy3.117142019-06-19
586Y2L|1|S2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Structure of human ribosome in POST stateElectron microscopy317132020-04-15
596ZUO|1|2Small subunit ribosomal RNApre-18S ribosomal RNAHomo sapiensEukaryaRF01960Human RIO1(kd)-StHA late pre-40S particle, structural state A (pre 18S rRNA cleavage)Electron microscopy3.116652021-05-12
609G8M|1|S2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960human 80S ribosome bound by a SKI2-exosome complexElectron microscopy3.317422024-10-23
618Y0X|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Dormant ribosome with SERBP1Electron microscopy3.317392024-02-07
627WTZ|1|2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B2Electron microscopy316242022-10-19
636ZN5|1|2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960SARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complex - state 2Electron microscopy3.216712020-07-29
647WTU|1|2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (without CK1)Electron microscopy315752022-10-19
658XXM|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of the human 40S ribosome with PDCD4 and eIF3GElectron microscopy3.217232024-05-01
668PJ1|1|ASmall subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Structure of human 48S translation initiation complex in open codon scanning state (48S-1)Electron microscopy3.417542024-08-14
678PJ2|1|ASmall subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Structure of human 48S translation initiation complex in AUG recognition state after eIF5-induced GTP hydrolysis by eIF2 (48S-2)Electron microscopy3.417542024-08-14
687WTX|1|2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B1Electron microscopy3.116052022-10-19
698XP3|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of the human 40S ribosome with LARP1 and LRRC47Electron microscopy3.417402024-11-20
709G8O|1|S2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960human 40S ribosome bound by a SKI238-exosome complexElectron microscopy3.417392024-10-16
716ZXD|1|2Small subunit ribosomal RNApre-18S ribosomal RNAHomo sapiensEukaryaRF01960Cryo-EM structure of a late human pre-40S ribosomal subunit - State F1Electron microscopy3.216452020-12-02
728Y0W|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960dormant ribosome with eIF5A, eEF2 and SERBP1Electron microscopy3.417352024-02-07
736Y0G|1|S2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Structure of human ribosome in classical-PRE stateElectron microscopy3.216972020-04-15
746ZMT|1|2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960SARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complexElectron microscopy315692020-08-19
757WTT|1|2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (with CK1)Electron microscopy3.115752022-10-19
767WTW|1|2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A3Electron microscopy3.215862022-10-19
777A09|1|2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Structure of a human ABCE1-bound 43S pre-initiation complex - State IIIElectron microscopy3.517212020-10-14
788OZ0|1|WSmall subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Structure of a human 48S translation initiation complex with eIF4F and eIF4AElectron microscopy3.517162024-02-07
796OLG|1|B1Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)Electron microscopy3.417082019-06-19
807TQL|1|2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960CryoEM structure of the human 40S small ribosomal subunit in complex with translation initiation factors eIF1A and eIF5B.Electron microscopy3.416562022-04-27
817MQ8|1|L1+ 7MQ8|1|L0+ 7MQ8|1|L2Small subunit ribosomal RNA + mir-663 microRNA + ACEA small nucleolar RNA U318S rRNA, 5'ETS rRNA, U3 snoRNAHomo sapiensEukaryaRF01960 + RF00957 + RF01848Cryo-EM structure of the human SSU processome, state pre-A1Electron microscopy3.617582021-09-22
827WU0|1|2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B3Electron microscopy3.316242022-10-19
836OLI|1|S2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)Electron microscopy3.517142019-06-19
848PJ3|1|ASmall subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Structure of human 48S translation initiation complex upon transfer of initiator tRNA to eIF5B (48S-3)Electron microscopy3.717542024-08-14
857QP7|1|ASmall subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Structure of the human 48S initiation complex in closed state (h48S AUG closed)Electron microscopy3.717192022-05-11
866ZMW|1|ASmall subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Structure of a human 48S translational initiation complexElectron microscopy3.717192020-09-23
878ZDB|1|2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of the human ubiquitylated 40S ribosome with RIOK3Electron microscopy3.616652025-02-12
888XXN|1|S2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of the human 43S ribosome with PDCD4Electron microscopy3.617232024-05-01
896Y57|1|S2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Structure of human ribosome in hybrid-PRE stateElectron microscopy3.516582020-04-15
906ZVJ|1|2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Structure of a human ABCE1-bound 43S pre-initiation complex - State IIElectron microscopy3.817202020-10-07
916G18|1|2Small subunit ribosomal RNApre-18S ribosomal RNAHomo sapiensEukaryaRF01960Cryo-EM structure of a late human pre-40S ribosomal subunit - State CElectron microscopy3.616582018-06-06
926G5I|1|2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Cryo-EM structure of a late human pre-40S ribosomal subunit - State RElectron microscopy3.516572018-06-06
934UG0|1|S2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960STRUCTURE OF THE HUMAN 80S RIBOSOMEElectron microscopy3.617422015-06-10
946ZXF|1|2Small subunit ribosomal RNApre-18S ribosomal RNAHomo sapiensEukaryaRF01960Cryo-EM structure of a late human pre-40S ribosomal subunit - State GElectron microscopy3.716562020-12-02
958ZDD|1|2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of the human ubiquitylated pre-40S ribosome with RIOK3 (without NOB1)Electron microscopy3.716522025-02-12
967WTS|1|2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of a human pre-40S ribosomal subunit - State UTP14Electron microscopy3.214812022-10-19
976IP8|1|2mSmall subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Cryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)Electron microscopy3.917422019-05-29
986IP5|1|2mSmall subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Cryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)Electron microscopy3.917422019-05-29
996G5H|1|2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Cryo-EM structure of a late human pre-40S ribosomal subunit - MatureElectron microscopy3.616652018-06-06
1007MQ9|1|L1+ 7MQ9|1|L0+ 7MQ9|1|L2Small subunit ribosomal RNA + mir-663 microRNA + ACEA small nucleolar RNA U318S rRNA, 5'ETS rRNA, U3 snoRNAHomo sapiensEukaryaRF01960 + RF00957 + RF01848Cryo-EM structure of the human SSU processome, state pre-A1*Electron microscopy3.8717582021-09-22
1016OM7|1|S2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAsElectron microscopy3.717142019-06-19
1026ZOK|1|2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960SARS-CoV-2-Nsp1-40S complex, focused on bodyElectron microscopy2.812322020-07-29
1038ZDC|1|2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of the human ubiquitylated pre-40S ribosome with RIOK3Electron microscopy3.816592025-02-12
1047WTV|1|2Small subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A2Electron microscopy3.515742022-10-19
1059BLN|1|ASmall subunit ribosomal RNArRNAHomo sapiensEukaryaRF01960The structure of human Pdcd4 bound to the 40S-eIF4A-eIF3-eIF1 complexElectron microscopy3.916722024-09-04
1066OLF|1|S2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAsElectron microscopy3.917142019-06-19
1076OLZ|1|B1Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNAElectron microscopy3.917082019-06-19
1085AJ0|1|B1Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Cryo electron microscopy of actively translating human polysomes (POST state).Electron microscopy3.517082015-05-20
1095A2Q|1|2Small subunit ribosomal RNA18S RRNAHomo sapiensEukaryaRF01960Structure of the HCV IRES bound to the human ribosomeElectron microscopy3.916652015-07-15
1106YBW|1|ASmall subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Structure of a human 48S translational initiation complex - 40S bodyElectron microscopy3.112202020-09-16
1116G4S|1|2Small subunit ribosomal RNApre-18S ribosomal RNAHomo sapiensEukaryaRF01960Cryo-EM structure of a late human pre-40S ribosomal subunit - State BElectron microscopy416132018-06-06
1125LKS|1|S2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Structure-function insights reveal the human ribosome as a cancer target for antibioticsElectron microscopy3.617422017-04-26
1136ZOL|1|2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960SARS-CoV-2-Nsp1-40S complex, focused on headElectron microscopy2.84722020-07-22
1145T2C|1|AASmall subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960CryoEM structure of the human ribosome at 3.6 Angstrom resolutionElectron microscopy3.617422017-01-25
1158RG0|1|ASmall subunit ribosomal RNA18S rRNAHomo sapiensEukaryaRF01960Structure of human eIF3 core from closed 48S translation initiation complexElectron microscopy3.41212024-08-14
1165A8L|1|BSmall subunit ribosomal RNAHUMAN 18S RIBOSOMAL RNAHomo sapiensEukaryaRF01960Human eRF1 and the hCMV nascent peptide in the translation termination complexElectron microscopy3.8672015-12-02

Release history

Release3.378
Date2025-03-13

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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
18RG0|1|AStructure of human eIF3 core from closed 48S translation initiation complexELECTRON MICROSCOPY3.4121
26YBW|1|AStructure of a human 48S translational initiation complex - 40S bodyELECTRON MICROSCOPY3.11220
36ZMW|1|AStructure of a human 48S translational initiation complexELECTRON MICROSCOPY3.71719
47R4X|1|2Cryo-EM reconstruction of the human 40S ribosomal subunit - Full mapELECTRON MICROSCOPY2.151646
56G5H|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - MatureELECTRON MICROSCOPY3.61665
68T4S|1|2MERS-CoV Nsp1 protein bound to the Human 40S Ribosomal subunitELECTRON MICROSCOPY2.61671
75A2Q|1|2Structure of the HCV IRES bound to the human ribosomeELECTRON MICROSCOPY3.91665
86ZVJ|1|2Structure of a human ABCE1-bound 43S pre-initiation complex - State IIELECTRON MICROSCOPY3.81720
96ZON|1|2SARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 1ELECTRON MICROSCOPY31721
106ZV6|1|2Human RIO1(kd)-StHA late pre-40S particle, structural state B (post 18S rRNA cleavage)ELECTRON MICROSCOPY2.91683
116ZXF|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State GELECTRON MICROSCOPY3.71656
126ZXG|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State H1ELECTRON MICROSCOPY2.61651
136ZXH|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State H2ELECTRON MICROSCOPY2.71651
148ZDB|1|2Cryo-EM structure of the human ubiquitylated 40S ribosome with RIOK3ELECTRON MICROSCOPY3.61665
156ZOJ|1|2SARS-CoV-2-Nsp1-40S complex, composite mapELECTRON MICROSCOPY2.81704
166ZOK|1|2SARS-CoV-2-Nsp1-40S complex, focused on bodyELECTRON MICROSCOPY2.81232
176ZMT|1|2SARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complexELECTRON MICROSCOPY31569
187A09|1|2Structure of a human ABCE1-bound 43S pre-initiation complex - State IIIELECTRON MICROSCOPY3.51721
196ZP4|1|2SARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 2ELECTRON MICROSCOPY2.91721
208PPL|1|A2MERS-CoV Nsp1 bound to the human 43S pre-initiation complexELECTRON MICROSCOPY2.651780
216ZOL|1|2SARS-CoV-2-Nsp1-40S complex, focused on headELECTRON MICROSCOPY2.8472
228PPK|1|2Bat-Hp-CoV Nsp1 and eIF1 bound to the human 40S small ribosomal subunitELECTRON MICROSCOPY2.981771
236ZLW|1|2SARS-CoV-2 Nsp1 bound to the human 40S ribosomal subunitELECTRON MICROSCOPY2.61665
247K5I|1|2SARS-COV-2 nsp1 in complex with human 40S ribosomeELECTRON MICROSCOPY2.91665
259G8O|1|S2human 40S ribosome bound by a SKI238-exosome complexELECTRON MICROSCOPY3.41739
268OZ0|1|WStructure of a human 48S translation initiation complex with eIF4F and eIF4AELECTRON MICROSCOPY3.51716
278JDM|1|wStructure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state)ELECTRON MICROSCOPY2.671634
288JDL|1|wStructure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state)ELECTRON MICROSCOPY2.421634
298JDJ|1|wStructure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)ELECTRON MICROSCOPY2.51634
308JDK|1|wStructure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)ELECTRON MICROSCOPY2.261634
316Y0G|1|S2Structure of human ribosome in classical-PRE stateELECTRON MICROSCOPY3.21697
327QVP|1|S3Human collided disome (di-ribosome) stalled on XBP1 mRNAELECTRON MICROSCOPY31705
336Y57|1|S2Structure of human ribosome in hybrid-PRE stateELECTRON MICROSCOPY3.51658
346OLI|1|S2Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)ELECTRON MICROSCOPY3.51714
356OLE|1|S2Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.11714
366OLF|1|S2Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAsELECTRON MICROSCOPY3.91714
378XSZ|1|S2Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA and P-tRNAELECTRON MICROSCOPY3.21740
386ZVH|1|2EDF1-ribosome complexELECTRON MICROSCOPY2.91740
396ZME|1|S2SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexELECTRON MICROSCOPY31740
406ZM7|1|S2SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexELECTRON MICROSCOPY2.71740
416ZMI|1|S2SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexELECTRON MICROSCOPY2.61740
426ZMO|1|S2SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complexELECTRON MICROSCOPY3.11740
436Z6L|1|S2Cryo-EM structure of human CCDC124 bound to 80S ribosomesELECTRON MICROSCOPY31740
446Z6N|1|S2Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)ELECTRON MICROSCOPY2.91740
457XNY|1|S2High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cellsELECTRON MICROSCOPY2.51740
467XNX|1|S2High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cellsELECTRON MICROSCOPY2.71740
476QZP|1|S2High-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.91740
488YOP|1|S2Cryo-EM structure of the human 80S ribosome with 4 um TigecyclineELECTRON MICROSCOPY2.21740
498K2C|1|S2Cryo-EM structure of the human 80S ribosome with TigecyclineELECTRON MICROSCOPY2.41740
508YOO|1|S2Cryo-EM structure of the human 80S ribosome with 100 um TigecyclineELECTRON MICROSCOPY21719
518QOI|1|S2Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNAELECTRON MICROSCOPY1.91740
528G60|1|S2mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)ELECTRON MICROSCOPY2.541654
538G5Y|1|S2mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state)ELECTRON MICROSCOPY2.291680
548GLP|1|S2mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)ELECTRON MICROSCOPY1.671672
558G5Z|1|S2mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)ELECTRON MICROSCOPY2.641701
568G6J|1|S2mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)ELECTRON MICROSCOPY2.81701
578G61|1|S2mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)ELECTRON MICROSCOPY2.941682
587TQL|1|2CryoEM structure of the human 40S small ribosomal subunit in complex with translation initiation factors eIF1A and eIF5B.ELECTRON MICROSCOPY3.41656
596ZN5|1|2SARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complex - state 2ELECTRON MICROSCOPY3.21671
609G8M|1|S2human 80S ribosome bound by a SKI2-exosome complexELECTRON MICROSCOPY3.31742
615T2C|1|AACryoEM structure of the human ribosome at 3.6 Angstrom resolutionELECTRON MICROSCOPY3.61742
624UG0|1|S2STRUCTURE OF THE HUMAN 80S RIBOSOMEELECTRON MICROSCOPY3.61742
635LKS|1|S2Structure-function insights reveal the human ribosome as a cancer target for antibioticsELECTRON MICROSCOPY3.61742
646IP8|1|2mCryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)ELECTRON MICROSCOPY3.91742
656IP5|1|2mCryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)ELECTRON MICROSCOPY3.91742
668IFE|1|2mArbekacin-added human 80S ribosomeELECTRON MICROSCOPY2.571742
678IFD|1|2mDibekacin-added human 80S ribosomeELECTRON MICROSCOPY2.591742
686OM7|1|S2Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAsELECTRON MICROSCOPY3.71714
696OM0|1|S2Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.11714
706OLZ|1|B1Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNAELECTRON MICROSCOPY3.91708
715AJ0|1|B1Cryo electron microscopy of actively translating human polysomes (POST state).ELECTRON MICROSCOPY3.51708
726OLG|1|B1Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)ELECTRON MICROSCOPY3.41708
735A8L|1|BHuman eRF1 and the hCMV nascent peptide in the translation termination complexELECTRON MICROSCOPY3.867
746XA1|1|S2Structure of a drug-like compound stalled human translation termination complexELECTRON MICROSCOPY2.81590
756Y2L|1|S2Structure of human ribosome in POST stateELECTRON MICROSCOPY31713
767QVP|1|S2Human collided disome (di-ribosome) stalled on XBP1 mRNAELECTRON MICROSCOPY31714
779C3H|1|S2Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.ELECTRON MICROSCOPY21660
788PJ5|1|AStructure of human 48S translation initiation complex after eIF2 release prior 60S subunit joining (48S-5)ELECTRON MICROSCOPY2.91754
798PJ3|1|AStructure of human 48S translation initiation complex upon transfer of initiator tRNA to eIF5B (48S-3)ELECTRON MICROSCOPY3.71754
808PJ4|1|AStructure of human 48S translation initiation complex after eIF5 release (48S-4)ELECTRON MICROSCOPY3.21754
818PJ2|1|AStructure of human 48S translation initiation complex in AUG recognition state after eIF5-induced GTP hydrolysis by eIF2 (48S-2)ELECTRON MICROSCOPY3.41754
828PJ6|1|AStructure of human 48S translation initiation complex with initiator tRNA, eIF1A and eIF3 (off-pathway)ELECTRON MICROSCOPY2.91719
837QP7|1|AStructure of the human 48S initiation complex in closed state (h48S AUG closed)ELECTRON MICROSCOPY3.71719
849BLN|1|AThe structure of human Pdcd4 bound to the 40S-eIF4A-eIF3-eIF1 complexELECTRON MICROSCOPY3.91672
859BKD|1|AThe structure of human Pdcd4 bound to the 40S small ribosomal subunitELECTRON MICROSCOPY2.61672
868XXL|1|S2Cryo-EM structure of the human 40S ribosome with PDCD4ELECTRON MICROSCOPY2.91723
878XXM|1|S2Cryo-EM structure of the human 40S ribosome with PDCD4 and eIF3GELECTRON MICROSCOPY3.21723
888XXN|1|S2Cryo-EM structure of the human 43S ribosome with PDCD4ELECTRON MICROSCOPY3.61723
898XSX|1|S2Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2ELECTRON MICROSCOPY2.41740
906Z6M|1|S2Cryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1ELECTRON MICROSCOPY3.11740
918Y0W|1|S2dormant ribosome with eIF5A, eEF2 and SERBP1ELECTRON MICROSCOPY3.41735
928XP3|1|S2Cryo-EM structure of the human 40S ribosome with LARP1 and LRRC47ELECTRON MICROSCOPY3.41740
938XP2|1|S2Cryo-EM structure of the human 40S ribosome with LARP1ELECTRON MICROSCOPY3.21740
948UKB|1|S2In situ HHT and CHX treated human hibernating state without E-tRNA 80S ribosomeELECTRON MICROSCOPY3.051740
958Y0X|1|S2Dormant ribosome with SERBP1ELECTRON MICROSCOPY3.31739
968XSY|1|S2Cryo-EM structure of the human 80S ribosome with Tigecycline, e-tRNA and CCDC124 (40S head Swivelled)ELECTRON MICROSCOPY31740
978PJ1|1|AStructure of human 48S translation initiation complex in open codon scanning state (48S-1)ELECTRON MICROSCOPY3.41754
986ZXD|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State F1ELECTRON MICROSCOPY3.21645
998ZDD|1|2Cryo-EM structure of the human ubiquitylated pre-40S ribosome with RIOK3 (without NOB1)ELECTRON MICROSCOPY3.71652
1008ZDC|1|2Cryo-EM structure of the human ubiquitylated pre-40S ribosome with RIOK3ELECTRON MICROSCOPY3.81659
1016ZUO|1|2Human RIO1(kd)-StHA late pre-40S particle, structural state A (pre 18S rRNA cleavage)ELECTRON MICROSCOPY3.11665
1026G5I|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State RELECTRON MICROSCOPY3.51657
1036ZXE|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State F2ELECTRON MICROSCOPY31645
1046G18|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State CELECTRON MICROSCOPY3.61658
1057WU0|1|2Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B3ELECTRON MICROSCOPY3.31624
1067WTZ|1|2Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B2ELECTRON MICROSCOPY31624
1077WTX|1|2Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B1ELECTRON MICROSCOPY3.11605
1087WTW|1|2Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A3ELECTRON MICROSCOPY3.21586
1097WTU|1|2Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (without CK1)ELECTRON MICROSCOPY31575
1107WTT|1|2Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (with CK1)ELECTRON MICROSCOPY3.11575
1117WTV|1|2Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A2ELECTRON MICROSCOPY3.51574
1127WTS|1|2Cryo-EM structure of a human pre-40S ribosomal subunit - State UTP14ELECTRON MICROSCOPY3.21481
1137MQA|1|L1+ 7MQA|1|L2Cryo-EM structure of the human SSU processome, state post-A1ELECTRON MICROSCOPY2.71813
1147MQ9|1|L1+ 7MQ9|1|L0+ 7MQ9|1|L2Cryo-EM structure of the human SSU processome, state pre-A1*ELECTRON MICROSCOPY3.871758
1157MQ8|1|L1+ 7MQ8|1|L0+ 7MQ8|1|L2Cryo-EM structure of the human SSU processome, state pre-A1ELECTRON MICROSCOPY3.61758
1166G4S|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State BELECTRON MICROSCOPY41613

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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