Equivalence class NR_4.0_50369.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8XTS|1|A (rep) | RNA (814-MER) | Comamonas testosteroni KF-1 | Comamonas testosteroni KF-1 circularly permuted group II intron Pre-1S state | Electron microscopy | 2.54 | 732 | 2025-02-12 | |||
| 2 | 8XTR|1|B+ 8XTR|1|A | RNA (219-MER), RNA (595-MER) | Comamonas testosteroni KF-1 | Comamonas testosteroni KF-1 circularly permuted group II intron 2S state | Electron microscopy | 2.67 | 740 | 2025-02-12 | |||
| 3 | 8X9K|1|A | RNA (808-MER) | Comamonas testosteroni KF-1 | Cte_Branching,Ca,inactive | Electron microscopy | 2.63 | 727 | 2025-03-12 | |||
| 4 | 8XTQ|1|A | RNA (808-MER) | Comamonas testosteroni KF-1 | Comamonas testosteroni KF-1 circularly permuted group II intron 1S state | Electron microscopy | 2.96 | 746 | 2025-02-12 | |||
| 5 | 8X9M|1|A | RNA (808-MER) | Comamonas testosteroni KF-1 | Cte-Branch Product, Mg, post | Electron microscopy | 2.78 | 722 | 2025-03-12 | |||
| 6 | 8XTP|1|B+ 8XTP|1|A | RNA (133-MER), RNA (595-MER) | Comamonas testosteroni KF-1 | Comamonas testosteroni KF-1 circularly permuted group II intron Post-2S state | Electron microscopy | 2.9 | 728 | 2025-02-12 | |||
| 7 | 8X9O|1|A | RNA (811-mer) | Comamonas testosteroni KF-1 | Cte-U537ins-Branching,Ca,inactive | Electron microscopy | 3.06 | 751 | 2025-03-12 | |||
| 8 | 8X9N|1|A | RNA (808-mer) | Comamonas testosteroni KF-1 | Cte_A695U_Branch Intermediate,Mg,inactive | Electron microscopy | 3.01 | 730 | 2025-03-12 | |||
| 9 | 8X9L|1|A | RNA (809-MER) | Comamonas testosteroni KF-1 | Cte-U537ins_Branch Intermediate,Ca,active | Electron microscopy | 3.04 | 733 | 2025-03-12 | |||
| 10 | 8X9Q|1|A | RNA (809-MER) | Comamonas testosteroni KF-1 | Cte-A695U-branching,Mg,active | Electron microscopy | 3.04 | 727 | 2025-03-12 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 8X9Q|1|A | Cte-A695U-branching,Mg,active | ELECTRON MICROSCOPY | 3.04 | 727 | |
| 2 | 8X9K|1|A | Cte_Branching,Ca,inactive | ELECTRON MICROSCOPY | 2.63 | 727 | |
| 3 | 8XTS|1|A | Comamonas testosteroni KF-1 circularly permuted group II intron Pre-1S state | ELECTRON MICROSCOPY | 2.54 | 732 | |
| 4 | 8XTR|1|B+ 8XTR|1|A | Comamonas testosteroni KF-1 circularly permuted group II intron 2S state | ELECTRON MICROSCOPY | 2.67 | 740 | |
| 5 | 8X9L|1|A | Cte-U537ins_Branch Intermediate,Ca,active | ELECTRON MICROSCOPY | 3.04 | 733 | |
| 6 | 8X9N|1|A | Cte_A695U_Branch Intermediate,Mg,inactive | ELECTRON MICROSCOPY | 3.01 | 730 | |
| 7 | 8X9M|1|A | Cte-Branch Product, Mg, post | ELECTRON MICROSCOPY | 2.78 | 722 | |
| 8 | 8XTP|1|B+ 8XTP|1|A | Comamonas testosteroni KF-1 circularly permuted group II intron Post-2S state | ELECTRON MICROSCOPY | 2.9 | 728 | |
| 9 | 8XTQ|1|A | Comamonas testosteroni KF-1 circularly permuted group II intron 1S state | ELECTRON MICROSCOPY | 2.96 | 746 | |
| 10 | 8X9O|1|A | Cte-U537ins-Branching,Ca,inactive | ELECTRON MICROSCOPY | 3.06 | 751 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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