Equivalence class NR_4.0_53311.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7KFN|1|B+ 7KFN|1|C (rep) | Gli1 1W5 23mer RNA, Gli1 8AZ 23mer RNA | Homo sapiens | Structure of Human Adenosine Deaminase Acting on dsRNA (ADAR2) bound to dsRNA containing a 2'-deoxy Benner's Base Z opposite the edited base | X-ray diffraction | 2.5 | 46 | 2021-06-16 | |||
| 2 | 5ED2|1|E+ 5ED2|1|F | RNA (5'-R(P*CP*AP*GP*AP*GP*CP*CP*CP*CP*CP*CP*AP*GP*CP*AP*UP*CP*GP*CP*GP*AP*GP*C)-3'), RNA (5'-R(P*GP*CP*UP*CP*GP*CP*GP*AP*UP*GP*CP*UP*(8AZ)P*GP*AP*GP*GP*GP*CP*UP*CP*UP*G)-3') | Homo sapiens | Human Adenosine Deaminase Acting on dsRNA (ADAR2) mutant E488Q bound to dsRNA sequence derived from human GLI1 gene | X-ray diffraction | 2.95 | 46 | 2016-04-13 | |||
| 3 | 5ED2|1|B+ 5ED2|1|C | RNA (5'-R(P*CP*AP*GP*AP*GP*CP*CP*CP*CP*CP*CP*AP*GP*CP*AP*UP*CP*GP*CP*GP*AP*GP*C)-3'), RNA (5'-R(P*GP*CP*UP*CP*GP*CP*GP*AP*UP*GP*CP*UP*(8AZ)P*GP*AP*GP*GP*GP*CP*UP*CP*UP*G)-3') | Homo sapiens | Human Adenosine Deaminase Acting on dsRNA (ADAR2) mutant E488Q bound to dsRNA sequence derived from human GLI1 gene | X-ray diffraction | 2.95 | 46 | 2016-04-13 | |||
| 4 | 6D06|1|B+ 6D06|1|C | RNA (5'-R(*CP*AP*GP*AP*GP*CP*CP*CP*CP*CP*NP*AP*GP*CP*AP*UP*CP*GP*CP*GP*AP*GP*C)-3'), RNA (5'-R(*GP*CP*UP*CP*GP*CP*GP*AP*UP*GP*CP*UP*(8AZ)P*GP*AP*GP*GP*GP*CP*UP*CP*UP*G)-3') | Homo sapiens | Human ADAR2d E488Y mutant complexed with dsRNA containing an abasic site opposite the edited base | X-ray diffraction | 2.55 | 46 | 2019-02-20 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 5ED2|1|B+ 5ED2|1|C | Human Adenosine Deaminase Acting on dsRNA (ADAR2) mutant E488Q bound to dsRNA sequence derived from human GLI1 gene | X-RAY DIFFRACTION | 2.95 | 46 | |
| 2 | 5ED2|1|E+ 5ED2|1|F | Human Adenosine Deaminase Acting on dsRNA (ADAR2) mutant E488Q bound to dsRNA sequence derived from human GLI1 gene | X-RAY DIFFRACTION | 2.95 | 46 | |
| 3 | 7KFN|1|B+ 7KFN|1|C | Structure of Human Adenosine Deaminase Acting on dsRNA (ADAR2) bound to dsRNA containing a 2'-deoxy Benner's Base Z opposite the edited base | X-RAY DIFFRACTION | 2.5 | 46 | |
| 4 | 6D06|1|B+ 6D06|1|C | Human ADAR2d E488Y mutant complexed with dsRNA containing an abasic site opposite the edited base | X-RAY DIFFRACTION | 2.55 | 46 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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