Equivalence class NR_4.0_54627.4 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4A3G|1|P (rep) | TRANSCRIPT RNA 5'-R(*CP*AP)-3' | Saccharomyces cerevisiae | RNA Polymerase II initial transcribing complex with a 2nt DNA-RNA hybrid | X-ray diffraction | 3.5 | 2012-02-08 | |||
| 2 | 4A3J|1|P | 5'-R(*CP*AP)-3' | synthetic construct | RNA Polymerase II initial transcribing complex with a 2nt DNA-RNA hybrid and soaked with GMPCPP | X-ray diffraction | 3.7 | 2011-12-07 | |||
| 3 | 7K00|1|5 | E-site tRNA | Escherichia coli | Structure of the Bacterial Ribosome at 2 Angstrom Resolution | Electron microscopy | 1.98 | 2020-09-23 | |||
| 4 | 5MMI|1|z | E-site tRNA | Spinacia oleracea | Structure of the large subunit of the chloroplast ribosome | Electron microscopy | 3.2 | 2017-01-11 | |||
| 5 | 3J9M|1|u | E-site tRNA | Homo sapiens | Structure of the human mitochondrial ribosome (class 1) | Electron microscopy | 3.5 | 2015-04-15 | |||
| 6 | 6NU2|1|u | E-site tRNA | Homo sapiens | Structural insights into unique features of the human mitochondrial ribosome recycling | Electron microscopy | 3.9 | 2019-04-17 |
Release history
Parents
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 4A3G|1|P | RNA Polymerase II initial transcribing complex with a 2nt DNA-RNA hybrid | X-RAY DIFFRACTION | 3.5 | 2 | |
| 2 | 3J9M|1|u | Structure of the human mitochondrial ribosome (class 1) | ELECTRON MICROSCOPY | 3.5 | 2 | |
| 3 | 4A3J|1|P | RNA Polymerase II initial transcribing complex with a 2nt DNA-RNA hybrid and soaked with GMPCPP | X-RAY DIFFRACTION | 3.7 | 2 | |
| 4 | 5MMI|1|z | Structure of the large subunit of the chloroplast ribosome | ELECTRON MICROSCOPY | 3.2 | 2 | |
| 5 | 7K00|1|5 | Structure of the Bacterial Ribosome at 2 Angstrom Resolution | ELECTRON MICROSCOPY | 1.98 | 2 | |
| 6 | 6NU2|1|u | Structural insights into unique features of the human mitochondrial ribosome recycling | ELECTRON MICROSCOPY | 3.9 | 2 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: