#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
15J7L|1|AA (rep)Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction315342016-07-27
24YBB|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.115342015-03-18
35J8A|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.115342016-07-06
45JC9|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.0315342016-07-06
54WOI|1|DASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNAEscherichia coliBacteriaRF001774,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction315392015-08-05
64WOI|1|AASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNAEscherichia coliBacteriaRF001774,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction315382015-08-05
75IT8|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.1215342016-07-27
84V9P|1|FASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
94V9O|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
105J7L|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction315332016-07-27
114V9P|1|HASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
124V9P|1|DASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
134V9P|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
145J8A|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.115332016-07-06
154V9O|1|FASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
165J91|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.9615342016-07-06
176I7V|1|AASmall subunit ribosomal RNA16S ribosmal RNAEscherichia coliBacteriaRF00177Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.915332018-12-05
184V6C|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.1915332014-07-09
195JC9|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.0315332016-07-06
204V52|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.2115302014-07-09
214V9O|1|DASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
224V7T|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.1915332014-07-09
234V57|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.515302014-07-09
244WWW|1|QASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.115332014-12-24
256LKQ|1|sSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177The Structural Basis for Inhibition of Ribosomal Translocation by ViomycinX-ray diffraction3.115322020-05-06
264V52|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.2115302014-07-09
274V57|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.515302014-07-09
284U27|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.815382014-07-30
295J88|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.3215342016-07-06
304V7V|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.2915332014-07-09
314V54|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.315302014-07-09
324WF1|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.0915382014-11-05
334YBB|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.115332015-03-18
344U1U|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.9515382014-07-30
354V64|1|CASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.515302014-07-09
364U26|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.815382014-07-30
374V53|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-ray diffraction3.5415302014-07-09
384V9D|1|AASmall subunit ribosomal RNA16S rRNA, messenger RNAEscherichia coliBacteriaRF00177Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction315382014-07-09
396I7V|1|BASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.915332018-12-05
404U24|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.915382014-07-30
414V7S|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.2515332014-07-09
424U25|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.915382014-07-30
435IT8|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.1215332016-07-27
444V56|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-ray diffraction3.9315302014-07-09
454V9D|1|BASmall subunit ribosomal RNA16S rRNA, messenger RNAEscherichia coliBacteriaRF00177Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction315392014-07-09
464V54|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.315302014-07-09
474U27|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.815392014-07-30
484V64|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.515302014-07-09
494V53|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-ray diffraction3.5415302014-07-09
504V56|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-ray diffraction3.9315302014-07-09
514V7U|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.115332014-07-09
524V55|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-ray diffraction415302014-07-09
534V50|1|CASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.2215302014-07-09
544V9O|1|HASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
554WWW|1|XASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.115302014-12-24
564V4Q|1|CASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.4615302014-07-09
574U20|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.915382014-07-30
584V55|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-ray diffraction415302014-07-09
594U1U|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.9515392014-07-30
604V50|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.2215302014-07-09
614U1V|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction315382014-07-30
624U25|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.915392014-07-30
634V6C|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.1915302014-07-09
646BY1|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli pH03H9 complexX-ray diffraction3.9415402019-02-27
655J88|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.3215332016-07-06
664V4Q|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.4615302014-07-09
676BY1|1|BASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNAEscherichia coliBacteriaRF00177E. coli pH03H9 complexX-ray diffraction3.9415412019-02-27
684U26|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.815392014-07-30
694V85|1|AA16S rRNACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-ray diffraction3.215322014-07-09
705J91|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.9615332016-07-06
714V7T|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.1915302014-07-09
724WF1|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.0915392014-11-05
734U24|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.915392014-07-30
744U1V|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction315392014-07-30
754V6D|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.8115332014-07-09
764U20|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.915392014-07-30
774V89|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-ray diffraction3.715322014-07-09
784V7S|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.2515302014-07-09
794V6D|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.8115302014-07-09
804V7V|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.2915302014-07-09
814V6E|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.7115332014-07-09
824V9C|1|CASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNA, mRNAEscherichia coliBacteriaRF00177Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.315382014-07-09
834V9C|1|AASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNA, mRNAEscherichia coliBacteriaRF00177Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.315392014-07-09
844V7U|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.115302014-07-09
854V6E|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.7115302014-07-09
864V5B|1|BASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Structure of PDF binding helix in complex with the ribosomeX-ray diffraction3.7415302014-07-09
874V5B|1|DASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Structure of PDF binding helix in complex with the ribosomeX-ray diffraction3.7415302014-07-09
885J5B|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.815342016-07-27
894V4H|1|CASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.4615302014-07-09
904V4H|1|AASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.4615302014-07-09
915J5B|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.815332016-07-27
927K00|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Bacterial Ribosome at 2 Angstrom ResolutionElectron microscopy1.9815192020-09-23
937N1P|1|16Small subunit ribosomal RNA16S rRNA, mRNAEscherichia coli K-12BacteriaRF00177Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationElectron microscopy2.3315422021-07-14
947N2U|1|16Small subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformationElectron microscopy2.5315342021-07-14
957N2V|1|16Small subunit ribosomal RNA16S rRNA, mRNAEscherichia coli K-12BacteriaRF00177Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)Electron microscopy2.5415342021-07-14
966YSS|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateElectron microscopy2.615402020-08-19
976XZB|1|A1Small subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).Electron microscopy2.5415232020-11-04
987N30|1|16Small subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformationElectron microscopy2.6615262021-07-14
997N31|1|16Small subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177Elongating 70S ribosome complex in a post-translocation (POST) conformationElectron microscopy2.6915332021-07-14
1006TC3|1|16S1Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)Electron microscopy2.715342020-01-01
1016TBV|1|16S1Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)Electron microscopy2.715342020-01-01
1027N2C|1|16Small subunit ribosomal RNA16S rRNA, Chains: mREscherichia coli K-12BacteriaRF00177Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)Electron microscopy2.7215342021-07-14
1036XZA|1|A1Small subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).Electron microscopy2.6615232020-11-04
1046Y69|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXElectron microscopy2.8615392020-07-01
1057NSO|1|aSmall subunit ribosomal RNA16S rRNA (1540-MER)Escherichia coliBacteriaRF00177Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNAElectron microscopy2.915402021-07-14
1065AFI|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF001772.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.915392015-03-11
1077B5K|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.Electron microscopy2.915332021-05-26
1085NWY|1|0Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF001772.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexElectron microscopy2.915392017-07-19
1096WD0|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)Electron microscopy315392020-07-01
1106H4N|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeElectron microscopy315342018-09-05
1116WDE|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)Electron microscopy315392020-07-01
1126ORE|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Release complex 70SElectron microscopy2.915342019-06-19
1135H5U|1|hSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Mechanistic insights into the alternative translation termination by ArfA and RF2Electron microscopy3.0115342017-01-25
1145WDT|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy315402018-04-25
1155WFS|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy315402018-05-02
1166SZS|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilisElectron microscopy3.0615402019-12-04
1175MDV|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)Electron microscopy2.9715342016-12-14
1187NSQ|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAElectron microscopy3.115402021-07-14
1195MGP|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsElectron microscopy3.115392016-12-14
1206ENU|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)Electron microscopy3.115392017-11-22
1215WE4|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.115402018-04-25
1226YSR|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of the P+9 stalled ribosome complexElectron microscopy3.115392020-08-19
1236ZTP|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-RNAP expressome complex in uncoupled state 6Electron microscopy315332020-09-16
1246ZU1|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-RNAP expressome complex in uncoupled state 2Electron microscopy315332020-09-16
1256ZTO|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-RNAP expressome complex in uncoupled state 1Electron microscopy315332020-09-23
1266X7K|1|DSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.115242020-09-02
1276OM6|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNAElectron microscopy3.115342021-02-10
1287LV0|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coli K-12BacteriaRF00177Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)Electron microscopy3.215392021-07-28
1297K53|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coli K-12BacteriaRF00177Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)Electron microscopy3.215392021-07-28
1307K54|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coli K-12BacteriaRF00177Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)Electron microscopy3.215392021-07-28
1316ENF|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PElectron microscopy3.215392017-11-22
1325U9G|1|ASmall subunit ribosomal RNA16S ribosomal RNA, truncated mRNAEscherichia coliBacteriaRF001773.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)Electron microscopy3.215392017-03-22
1336WNW|1|3Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNAElectron microscopy3.215392020-06-24
1345U9F|1|ASmall subunit ribosomal RNA16S ribosomal RNA, truncated mRNAEscherichia coliBacteriaRF001773.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)Electron microscopy3.215392017-03-22
1356WDD|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)Electron microscopy3.215392020-07-01
1363JCE|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.215332016-01-13
1375UYM|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.215392017-06-07
1386YST|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis stateElectron microscopy3.215402020-08-19
1396X6T|1|DSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.215242020-09-02
1405MDW|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.0615342016-12-14
1415MDZ|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of the 70S ribosome (empty A site)Electron microscopy3.115342016-12-14
1427OE0|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli BW25113BacteriaRF00177E. coli pre-30S delta rbfA ribosomal subunit class FElectron microscopy2.6915102021-07-14
1436C4I|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Conformation of methylated GGQ in the peptidyl transferase center during translation terminationElectron microscopy3.2415342018-02-21
1447JT1|1|3Small subunit ribosomal RNA16S ribosomal RNAEscherichia coli K-12BacteriaRF0017770S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)Electron microscopy3.315392020-11-11
1457K55|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coli K-12BacteriaRF00177Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)Electron microscopy3.315392021-07-28
1466WDG|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)Electron microscopy3.315392020-07-01
1476WD1|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)Electron microscopy3.315392020-07-01
1486WDF|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)Electron microscopy3.315392020-07-01
1496OFX|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Non-rotated ribosome (Structure I)Electron microscopy3.315392019-09-25
1506VWL|1|1Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF0017770S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)Electron microscopy3.115212020-06-03
1516OG7|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)Electron microscopy3.315392019-09-25
1527K50|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coli K-12BacteriaRF00177Pre-translocation non-frameshifting(CCA-A) complex (Structure I)Electron microscopy3.415392021-07-28
1535O2R|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeElectron microscopy3.415392017-07-26
1547D6Z|1|fSmall subunit ribosomal RNA16S ribosomal rRNAEscherichia coliBacteriaRF00177Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factorElectron microscopy3.415392021-04-07
1557K52|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coli K-12BacteriaRF00177Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)Electron microscopy3.415392021-07-28
1566OGI|1|3Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF0017770S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)Electron microscopy3.415392019-09-25
1575WFK|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.415402018-05-02
1585LZD|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)Electron microscopy3.415392016-11-23
1595WE6|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.415392018-04-25
1607JT2|1|3Small subunit ribosomal RNA16S ribosomal RNAEscherichia coli K-12BacteriaRF0017770S ribosome stalled on long mRNA with ArfB bound in the A siteElectron microscopy3.515392020-11-11
1617K51|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coli K-12BacteriaRF00177Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)Electron microscopy3.515392021-07-28
1626WNV|1|3Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF0017770S ribosome without free 5S rRNA and with a perturbed PTCElectron microscopy3.515392020-06-24
1636BU8|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.515392018-01-31
1645LZE|1|a+ 5LZE|1|y+ 5LZE|1|v+ 5LZE|1|xSmall subunit ribosomal RNA + Selenocysteine transfer RNA + Transfer RNA16S ribosomal RNA, fMetSec-tRNASec, SECIS mRNA, tRNAfMetEscherichia coliBacteriaRF00177 + RF01852 + RF00005Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)Electron microscopy3.515282016-11-23
1655MDY|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.3515342016-12-21
1666X7F|1|DSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.515242020-09-02
1675U4I|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.515332017-01-11
1686ZTM|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-RNAP expressome complex in collided state without NusGElectron microscopy3.315332020-09-16
1696ZTJ|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)Electron microscopy3.415332020-09-16
1705UYL|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)Electron microscopy3.615392017-06-14
1715KCR|1|1aSmall subunit ribosomal RNA16S Ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolutionElectron microscopy3.615392016-08-17
1725IQR|1|2Small subunit ribosomal RNASSU rRNAEscherichia coliBacteriaRF00177Structure of RelA bound to the 70S ribosomeElectron microscopy315332016-05-04
1736WDM|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B2)Electron microscopy3.615392020-07-01
1746WDK|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A2)Electron microscopy3.615392020-07-08
1756WD3|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B1)Electron microscopy3.615392020-07-08
1766WD5|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C1)Electron microscopy3.615392020-07-08
1776WD2|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-A)Electron microscopy3.615392020-07-08
1783JBV|1|ASmall subunit ribosomal RNARNA (1530-MER)Escherichia coliBacteriaRF00177Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.3215302016-01-27
1795WF0|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)Electron microscopy3.615402018-05-02
1805LZA|1|aSmall subunit ribosomal RNA16S ribosomal RNA, SECIS mRNAEscherichia coliBacteriaRF00177Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)Electron microscopy3.615392016-11-23
1816OSQ|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177RF1 accommodated state bound Release complex 70S at long incubation time pointElectron microscopy3.515342019-06-26
1826VWM|1|1Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF0017770S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)Electron microscopy3.415082020-06-03
1836VWN|1|1Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF0017770S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)Electron microscopy3.415082020-06-03
1845JTE|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNAElectron microscopy3.615392016-07-20
1855JU8|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNAElectron microscopy3.615392016-07-20
1867JSS|1|3Small subunit ribosomal RNA16S ribosomal RNAEscherichia coli K-12BacteriaRF00177ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II)Electron microscopy3.715392020-11-11
1873JCJ|1|gSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationElectron microscopy3.715392016-03-09
1887JSZ|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coli K-12BacteriaRF00177ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV)Electron microscopy3.715392020-11-11
1897JT3|1|3Small subunit ribosomal RNA16S ribosomal RNAEscherichia coli K-12BacteriaRF00177Rotated 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound in the A site (+9-IV)Electron microscopy3.715392020-11-11
1906ENJ|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)Electron microscopy3.715392017-11-22
1913J9Z|1|SASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.615422015-07-01
1926WDL|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B1)Electron microscopy3.715392020-07-01
1936WDJ|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A1)Electron microscopy3.715392020-07-01
1946WD9|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-B)Electron microscopy3.715392020-07-08
1956WD4|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B2)Electron microscopy3.715392020-07-08
1966WD8|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-A)Electron microscopy3.715392020-07-08
1976WD6|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C2)Electron microscopy3.715392020-07-08
1983JCD|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)Electron microscopy3.715332016-01-13
1996YSU|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis stateElectron microscopy3.715402020-08-19
2005L3P|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexElectron microscopy3.715392016-07-20
2016DNC|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codonElectron microscopy3.715392018-07-04
2026XDQ|1|DSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 30 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.715242020-09-02
2036VYS|1|DSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Escherichia coli transcription-translation complex A1 (TTC-A1) containing a 21 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-siteElectron microscopy3.715242020-09-02
2046VYQ|1|DSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Escherichia coli transcription-translation complex A1 (TTC-A1) containing an 15 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-siteElectron microscopy3.715242020-09-02
2056VU3|1|DSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Cryo-EM structure of Escherichia coli transcription-translation complex A (TTC-A) containing mRNA with a 12 nt long spacerElectron microscopy3.715242020-09-02
2066OSK|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177RF1 accommodated 70S complex at 60 msElectron microscopy3.615342019-06-26
2076ORL|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177RF1 pre-accommodated 70S complex at 24 msElectron microscopy3.515342019-06-19
2085UYQ|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)Electron microscopy3.815392017-06-07
2096GXM|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)Electron microscopy3.815392018-08-22
2106GWT|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)Electron microscopy3.815392018-08-15
2117JSW|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coli K-12BacteriaRF00177ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)Electron microscopy3.815392020-11-11
2126W6K|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017730S-Activated-high-Mg2+Electron microscopy3.615342020-10-21
2136WDA|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C)Electron microscopy3.815392020-07-08
2146W77|1|ASmall subunit ribosomal RNARNA (1519-MER)Escherichia coliBacteriaRF0017730S-Inactivated-high-Mg2+ Class AElectron microscopy3.615192020-10-21
2156VYR|1|DSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Escherichia coli transcription-translation complex A1 (TTC-A1) containing an 18 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-siteElectron microscopy3.815242020-09-02
2166Q9A|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of tmRNA SmpB bound past E site of E. coli 70S ribosomeElectron microscopy3.715342019-04-17
2177BOG|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state E (body domain)Electron microscopy2.7510712021-07-07
2186OUO|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177RF2 accommodated state bound 70S complex at long incubation timeElectron microscopy3.715342019-06-19
2195UYP|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)Electron microscopy3.915392017-06-07
2206GXO|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)Electron microscopy3.915392018-08-15
2216GXN|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)Electron microscopy3.915392018-08-15
2226WD7|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D)Electron microscopy3.915392020-07-08
2236OGF|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S termination complex with RF2 bound to the UGA codon. Partially rotated ribosome with RF2 bound (Structure III).Electron microscopy3.915392019-09-25
2245UYK|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)Electron microscopy3.915392017-06-07
2256O9J|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S Elongation Competent RibosomeElectron microscopy3.915302019-05-29
2267OE1|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli str. K-12 substr. MG1655BacteriaRF0017730S ribosomal subunit from E. coliElectron microscopy3.0515302021-07-14
2275KPW|1|26Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)Electron microscopy3.915392016-09-28
2283J9Y|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeElectron microscopy3.915392015-04-15
2295KCS|1|1aSmall subunit ribosomal RNA16S Ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolutionElectron microscopy3.915392016-08-17
2306W7N|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017730S-Inactive-low-Mg2+ Class AElectron microscopy3.413722020-10-21
2315KPS|1|27Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)Electron microscopy3.915392016-09-28
2325UYN|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)Electron microscopy415392017-06-07
2336O9K|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S initiation complexElectron microscopy415392019-05-29
2346WDI|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2)Electron microscopy415392020-07-01
2356ZTL|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-RNAP expressome complex in collided state bound to NusGElectron microscopy3.515332020-09-16
2366WDB|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A)Electron microscopy415392020-07-01
2375KPX|1|26Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)Electron microscopy3.915392016-09-28
2387BOD|1|ASmall subunit ribosomal RNA16S rRNA (body domain of 30S subunit)Escherichia coli K-12BacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state M (body domain)Electron microscopy2.8810782021-07-07
2396Q97|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of tmRNA SmpB bound in A site of E. coli 70S ribosomeElectron microscopy3.915342019-03-13
2403JBU|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.6415302016-01-27
2416OT3|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177RF2 accommodated state bound Release complex 70S at 24 msElectron microscopy3.915342019-06-19
2427BOF|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state I (body domain)Electron microscopy2.9210702021-07-07
2436W7M|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017730S-Inactive-high-Mg2+ + carbon layerElectron microscopy3.815122020-10-21
2446ZTN|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)Electron microscopy3.915332020-09-16
2455NP6|1|DSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF0017770S structure prior to bypassingElectron microscopy3.615392017-06-14
2467BOI|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state F (multibody refinement for body domain of 30S ribosome)Electron microscopy2.9810782021-07-07
2473JA1|1|SASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.615422015-07-01
2486NQB|1|ASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Role of Era in Assembly and Homeostasis of the Ribosomal Small SubunitElectron microscopy3.813412019-06-26
2497O5H|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Ribosomal methyltransferase KsgA bound to small ribosomal subunitElectron microscopy3.19642021-06-16
2507OI0|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli BW25113BacteriaRF00177E.coli delta rbfA pre-30S ribosomal subunit class DElectron microscopy2.769632021-07-14
2517NAS|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state A (multibody refinement for body domain of 30S ribosome)Electron microscopy3.319742021-07-07
2527AF8|1|1Small subunit ribosomal RNA16SrRNA (head domain of the 30S ribosomeEscherichia coliBacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state E (head domain)Electron microscopy2.754562021-07-07
2537AFO|1|ASmall subunit ribosomal RNA16SrRNA (body domain of the 30S ribosome)Escherichia coliBacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state B (body domain)Electron microscopy3.939712021-07-07
2547AF3|1|1Small subunit ribosomal RNA16S rRNA (head)Escherichia coliBacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state M (head domain)Electron microscopy2.824562021-07-07
2557AF5|1|1Small subunit ribosomal RNA16SrRNA (head domain of the 30S ribosome)Escherichia coliBacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state I (head domain)Electron microscopy2.964562021-07-07
2567AFA|1|1Small subunit ribosomal RNA16SrRNA (head domain of the 30S ribosome)Escherichia coliBacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state F (head domain)Electron microscopy2.954562021-07-07
2576W7W|1|2Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017730S-Inactive-low-Mg2+ Class BElectron microscopy3.98712020-10-21
2587AFI|1|ASmall subunit ribosomal RNA16SrRNAEscherichia coliBacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state C (body domain)Electron microscopy3.5310662021-07-07
2595U4J|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.73072017-01-11
2607AFD|1|1Small subunit ribosomal RNA16SrRNA of the head domain (residue C931 to G1386)Escherichia coliBacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state A (head domain)Electron microscopy3.444562021-07-07
2617AFH|1|1Small subunit ribosomal RNA16SrRNA (head domain of the 30S ribosome)Escherichia coliBacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state C (head domain)Electron microscopy3.594562021-07-07
2627AFN|1|1Small subunit ribosomal RNA16SrRNA (head domain of the 30S ribosome)Escherichia coliBacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state B (head domain)Electron microscopy3.864562021-07-07

Release history

Release3.190
Date2021-08-04

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_56726.69NR_4.0_56726.683.190(262) 3J9Y|1|a, 3J9Z|1|SA, 3JA1|1|SA, 3JBU|1|A, 3JBV|1|A, 3JCD|1|a, 3JCE|1|a, 3JCJ|1|g, 4U1U|1|AA, 4U1U|1|CA, 4U1V|1|AA, 4U1V|1|CA, 4U20|1|AA, 4U20|1|CA, 4U24|1|AA, 4U24|1|CA, 4U25|1|AA, 4U25|1|CA, 4U26|1|AA, 4U26|1|CA, 4U27|1|AA, 4U27|1|CA, 4V4H|1|AA, 4V4H|1|CA, 4V4Q|1|AA, 4V4Q|1|CA, 4V50|1|AA, 4V50|1|CA, 4V52|1|AA, 4V52|1|CA, 4V53|1|AA, 4V53|1|CA, 4V54|1|AA, 4V54|1|CA, 4V55|1|AA, 4V55|1|CA, 4V56|1|AA, 4V56|1|CA, 4V57|1|AA, 4V57|1|CA, 4V5B|1|BA, 4V5B|1|DA, 4V64|1|AA, 4V64|1|CA, 4V6C|1|AA, 4V6C|1|CA, 4V6D|1|AA, 4V6D|1|CA, 4V6E|1|AA, 4V6E|1|CA, 4V7S|1|AA, 4V7S|1|CA, 4V7T|1|AA, 4V7T|1|CA, 4V7U|1|AA, 4V7U|1|CA, 4V7V|1|AA, 4V7V|1|CA, 4V85|1|AA, 4V89|1|AA, 4V9C|1|AA, 4V9C|1|CA, 4V9D|1|AA, 4V9D|1|BA, 4V9O|1|BA, 4V9O|1|DA, 4V9O|1|FA, 4V9O|1|HA, 4V9P|1|BA, 4V9P|1|DA, 4V9P|1|FA, 4V9P|1|HA, 4WF1|1|AA, 4WF1|1|CA, 4WOI|1|AA, 4WOI|1|DA, 4WWW|1|QA, 4WWW|1|XA, 4YBB|1|AA, 4YBB|1|BA, 5AFI|1|a, 5H5U|1|h, 5IQR|1|2, 5IT8|1|AA, 5IT8|1|BA, 5J5B|1|AA, 5J5B|1|BA, 5J7L|1|AA, 5J7L|1|BA, 5J88|1|AA, 5J88|1|BA, 5J8A|1|AA, 5J8A|1|BA, 5J91|1|AA, 5J91|1|BA, 5JC9|1|AA, 5JC9|1|BA, 5JTE|1|AA, 5JU8|1|AA, 5KCR|1|1a, 5KCS|1|1a, 5KPS|1|27, 5KPW|1|26, 5KPX|1|26, 5L3P|1|a, 5LZA|1|a, 5LZD|1|a, 5LZE|1|a+5LZE|1|y+5LZE|1|v+5LZE|1|x, 5MDV|1|2, 5MDW|1|2, 5MDY|1|2, 5MDZ|1|2, 5MGP|1|a, 5NP6|1|D, 5NWY|1|0, 5O2R|1|a, 5U4I|1|a, 5U4J|1|a, 5U9F|1|A, 5U9G|1|A, 5UYK|1|A, 5UYL|1|A, 5UYM|1|A, 5UYN|1|A, 5UYP|1|A, 5UYQ|1|A, 5WDT|1|a, 5WE4|1|a, 5WE6|1|a, 5WF0|1|a, 5WFK|1|a, 5WFS|1|a, 6BU8|1|A, 6BY1|1|AA, 6BY1|1|BA, 6C4I|1|a, 6DNC|1|A, 6ENF|1|a, 6ENJ|1|a, 6ENU|1|a, 6GWT|1|a, 6GXM|1|a, 6GXN|1|a, 6GXO|1|a, 6H4N|1|a, 6I7V|1|AA, 6I7V|1|BA, 6LKQ|1|s, 6NQB|1|A, 6O9J|1|a, 6O9K|1|a, 6OFX|1|3, 6OG7|1|3, 6OGF|1|3, 6OGI|1|3, 6OM6|1|2, 6ORE|1|2, 6ORL|1|2, 6OSK|1|2, 6OSQ|1|2, 6OT3|1|2, 6OUO|1|2, 6Q97|1|2, 6Q9A|1|2, 6SZS|1|a, 6TBV|1|16S1, 6TC3|1|16S1, 6VU3|1|D, 6VWL|1|1, 6VWM|1|1, 6VWN|1|1, 6VYQ|1|D, 6VYR|1|D, 6VYS|1|D, 6W6K|1|A, 6W77|1|A, 6W7M|1|A, 6W7N|1|A, 6W7W|1|2, 6WD0|1|3, 6WD1|1|3, 6WD2|1|3, 6WD3|1|3, 6WD4|1|3, 6WD5|1|3, 6WD6|1|3, 6WD7|1|3, 6WD8|1|3, 6WD9|1|3, 6WDA|1|3, 6WDB|1|3, 6WDD|1|3, 6WDE|1|3, 6WDF|1|3, 6WDG|1|3, 6WDI|1|3, 6WDJ|1|3, 6WDK|1|3, 6WDL|1|3, 6WDM|1|3, 6WNV|1|3, 6WNW|1|3, 6X6T|1|D, 6X7F|1|D, 6X7K|1|D, 6XDQ|1|D, 6XZA|1|A1, 6XZB|1|A1, 6Y69|1|a, 6YSR|1|a, 6YSS|1|a, 6YST|1|a, 6YSU|1|a, 6ZTJ|1|AA, 6ZTL|1|AA, 6ZTM|1|AA, 6ZTN|1|AA, 6ZTO|1|AA, 6ZTP|1|AA, 6ZU1|1|AA, 7AF3|1|1, 7AF5|1|1, 7AF8|1|1, 7AFA|1|1, 7AFD|1|1, 7AFH|1|1, 7AFI|1|A, 7AFN|1|1, 7AFO|1|A, 7B5K|1|a, 7BOD|1|A, 7BOF|1|A, 7BOG|1|A, 7BOI|1|A, 7D6Z|1|f, 7JSS|1|3, 7JSW|1|3, 7JSZ|1|3, 7JT1|1|3, 7JT2|1|3, 7JT3|1|3, 7K00|1|A, 7K50|1|3, 7K51|1|3, 7K52|1|3, 7K53|1|3, 7K54|1|3, 7K55|1|3, 7LV0|1|3, 7N1P|1|16, 7N2C|1|16, 7N2U|1|16, 7N2V|1|16, 7N30|1|16, 7N31|1|16, 7NAS|1|A, 7NSO|1|a, 7NSQ|1|a, 7O5H|1|A, 7OE0|1|A, 7OE1|1|A, 7OI0|1|A(0) (1) 7AA6|1|BA

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_56726.69NR_4.0_56726.703.191(262) 3J9Y|1|a, 3J9Z|1|SA, 3JA1|1|SA, 3JBU|1|A, 3JBV|1|A, 3JCD|1|a, 3JCE|1|a, 3JCJ|1|g, 4U1U|1|AA, 4U1U|1|CA, 4U1V|1|AA, 4U1V|1|CA, 4U20|1|AA, 4U20|1|CA, 4U24|1|AA, 4U24|1|CA, 4U25|1|AA, 4U25|1|CA, 4U26|1|AA, 4U26|1|CA, 4U27|1|AA, 4U27|1|CA, 4V4H|1|AA, 4V4H|1|CA, 4V4Q|1|AA, 4V4Q|1|CA, 4V50|1|AA, 4V50|1|CA, 4V52|1|AA, 4V52|1|CA, 4V53|1|AA, 4V53|1|CA, 4V54|1|AA, 4V54|1|CA, 4V55|1|AA, 4V55|1|CA, 4V56|1|AA, 4V56|1|CA, 4V57|1|AA, 4V57|1|CA, 4V5B|1|BA, 4V5B|1|DA, 4V64|1|AA, 4V64|1|CA, 4V6C|1|AA, 4V6C|1|CA, 4V6D|1|AA, 4V6D|1|CA, 4V6E|1|AA, 4V6E|1|CA, 4V7S|1|AA, 4V7S|1|CA, 4V7T|1|AA, 4V7T|1|CA, 4V7U|1|AA, 4V7U|1|CA, 4V7V|1|AA, 4V7V|1|CA, 4V85|1|AA, 4V89|1|AA, 4V9C|1|AA, 4V9C|1|CA, 4V9D|1|AA, 4V9D|1|BA, 4V9O|1|BA, 4V9O|1|DA, 4V9O|1|FA, 4V9O|1|HA, 4V9P|1|BA, 4V9P|1|DA, 4V9P|1|FA, 4V9P|1|HA, 4WF1|1|AA, 4WF1|1|CA, 4WOI|1|AA, 4WOI|1|DA, 4WWW|1|QA, 4WWW|1|XA, 4YBB|1|AA, 4YBB|1|BA, 5AFI|1|a, 5H5U|1|h, 5IQR|1|2, 5IT8|1|AA, 5IT8|1|BA, 5J5B|1|AA, 5J5B|1|BA, 5J7L|1|AA, 5J7L|1|BA, 5J88|1|AA, 5J88|1|BA, 5J8A|1|AA, 5J8A|1|BA, 5J91|1|AA, 5J91|1|BA, 5JC9|1|AA, 5JC9|1|BA, 5JTE|1|AA, 5JU8|1|AA, 5KCR|1|1a, 5KCS|1|1a, 5KPS|1|27, 5KPW|1|26, 5KPX|1|26, 5L3P|1|a, 5LZA|1|a, 5LZD|1|a, 5LZE|1|a+5LZE|1|y+5LZE|1|v+5LZE|1|x, 5MDV|1|2, 5MDW|1|2, 5MDY|1|2, 5MDZ|1|2, 5MGP|1|a, 5NP6|1|D, 5NWY|1|0, 5O2R|1|a, 5U4I|1|a, 5U4J|1|a, 5U9F|1|A, 5U9G|1|A, 5UYK|1|A, 5UYL|1|A, 5UYM|1|A, 5UYN|1|A, 5UYP|1|A, 5UYQ|1|A, 5WDT|1|a, 5WE4|1|a, 5WE6|1|a, 5WF0|1|a, 5WFK|1|a, 5WFS|1|a, 6BU8|1|A, 6BY1|1|AA, 6BY1|1|BA, 6C4I|1|a, 6DNC|1|A, 6ENF|1|a, 6ENJ|1|a, 6ENU|1|a, 6GWT|1|a, 6GXM|1|a, 6GXN|1|a, 6GXO|1|a, 6H4N|1|a, 6I7V|1|AA, 6I7V|1|BA, 6LKQ|1|s, 6NQB|1|A, 6O9J|1|a, 6O9K|1|a, 6OFX|1|3, 6OG7|1|3, 6OGF|1|3, 6OGI|1|3, 6OM6|1|2, 6ORE|1|2, 6ORL|1|2, 6OSK|1|2, 6OSQ|1|2, 6OT3|1|2, 6OUO|1|2, 6Q97|1|2, 6Q9A|1|2, 6SZS|1|a, 6TBV|1|16S1, 6TC3|1|16S1, 6VU3|1|D, 6VWL|1|1, 6VWM|1|1, 6VWN|1|1, 6VYQ|1|D, 6VYR|1|D, 6VYS|1|D, 6W6K|1|A, 6W77|1|A, 6W7M|1|A, 6W7N|1|A, 6W7W|1|2, 6WD0|1|3, 6WD1|1|3, 6WD2|1|3, 6WD3|1|3, 6WD4|1|3, 6WD5|1|3, 6WD6|1|3, 6WD7|1|3, 6WD8|1|3, 6WD9|1|3, 6WDA|1|3, 6WDB|1|3, 6WDD|1|3, 6WDE|1|3, 6WDF|1|3, 6WDG|1|3, 6WDI|1|3, 6WDJ|1|3, 6WDK|1|3, 6WDL|1|3, 6WDM|1|3, 6WNV|1|3, 6WNW|1|3, 6X6T|1|D, 6X7F|1|D, 6X7K|1|D, 6XDQ|1|D, 6XZA|1|A1, 6XZB|1|A1, 6Y69|1|a, 6YSR|1|a, 6YSS|1|a, 6YST|1|a, 6YSU|1|a, 6ZTJ|1|AA, 6ZTL|1|AA, 6ZTM|1|AA, 6ZTN|1|AA, 6ZTO|1|AA, 6ZTP|1|AA, 6ZU1|1|AA, 7AF3|1|1, 7AF5|1|1, 7AF8|1|1, 7AFA|1|1, 7AFD|1|1, 7AFH|1|1, 7AFI|1|A, 7AFN|1|1, 7AFO|1|A, 7B5K|1|a, 7BOD|1|A, 7BOF|1|A, 7BOG|1|A, 7BOI|1|A, 7D6Z|1|f, 7JSS|1|3, 7JSW|1|3, 7JSZ|1|3, 7JT1|1|3, 7JT2|1|3, 7JT3|1|3, 7K00|1|A, 7K50|1|3, 7K51|1|3, 7K52|1|3, 7K53|1|3, 7K54|1|3, 7K55|1|3, 7LV0|1|3, 7N1P|1|16, 7N2C|1|16, 7N2U|1|16, 7N2V|1|16, 7N30|1|16, 7N31|1|16, 7NAS|1|A, 7NSO|1|a, 7NSQ|1|a, 7O5H|1|A, 7OE0|1|A, 7OE1|1|A, 7OI0|1|A(0) (1) 7NSP|1|a

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
17BOF|1|ABacterial 30S ribosomal subunit assembly complex state I (body domain)ELECTRON MICROSCOPY2.921070
27O5H|1|ARibosomal methyltransferase KsgA bound to small ribosomal subunitELECTRON MICROSCOPY3.1964
37AFI|1|ABacterial 30S ribosomal subunit assembly complex state C (body domain)ELECTRON MICROSCOPY3.531066
47AFO|1|ABacterial 30S ribosomal subunit assembly complex state B (body domain)ELECTRON MICROSCOPY3.93971
57NAS|1|ABacterial 30S ribosomal subunit assembly complex state A (multibody refinement for body domain of 30S ribosome)ELECTRON MICROSCOPY3.31974
67OE1|1|A30S ribosomal subunit from E. coliELECTRON MICROSCOPY3.051530
77OI0|1|AE.coli delta rbfA pre-30S ribosomal subunit class DELECTRON MICROSCOPY2.76963
87OE0|1|AE. coli pre-30S delta rbfA ribosomal subunit class FELECTRON MICROSCOPY2.691510
96W7W|1|230S-Inactive-low-Mg2+ Class BELECTRON MICROSCOPY3.9871
106W77|1|A30S-Inactivated-high-Mg2+ Class AELECTRON MICROSCOPY3.61519
116W7M|1|A30S-Inactive-high-Mg2+ + carbon layerELECTRON MICROSCOPY3.81512
126W7N|1|A30S-Inactive-low-Mg2+ Class AELECTRON MICROSCOPY3.41372
136NQB|1|ARole of Era in Assembly and Homeostasis of the Ribosomal Small SubunitELECTRON MICROSCOPY3.81341
146W6K|1|A30S-Activated-high-Mg2+ELECTRON MICROSCOPY3.61534
157N2C|1|16Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)ELECTRON MICROSCOPY2.721534
167K51|1|3Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)ELECTRON MICROSCOPY3.51539
177K54|1|3Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)ELECTRON MICROSCOPY3.21539
187JT3|1|3Rotated 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound in the A site (+9-IV)ELECTRON MICROSCOPY3.71539
196YST|1|aStructure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis stateELECTRON MICROSCOPY3.21540
204V5B|1|DAStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.741530
214V4Q|1|CACrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.461530
224V4H|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.461530
234V54|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.31530
244V64|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.51530
254V52|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.211530
264V53|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.541530
274V55|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION41530
284V57|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.51530
294V56|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.931530
304V9P|1|FAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
314V89|1|AACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-RAY DIFFRACTION3.71532
324V85|1|AACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-RAY DIFFRACTION3.21532
336LKQ|1|sThe Structural Basis for Inhibition of Ribosomal Translocation by ViomycinX-RAY DIFFRACTION3.11532
344V9O|1|HAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
354V9P|1|HAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
364V64|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.51530
374V55|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION41530
384V53|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.541530
394V52|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.211530
404V57|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.51530
414V54|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.31530
424V4H|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.461530
436O9J|1|a70S Elongation Competent RibosomeELECTRON MICROSCOPY3.91530
444V4Q|1|AACrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.461530
454V56|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.931530
464V5B|1|BAStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.741530
474V50|1|CACrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.221530
484V50|1|AACrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.221530
494V6E|1|CACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.711530
504V6D|1|CACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.811530
514WWW|1|XACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.11530
524V7T|1|CACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.191530
534V7V|1|CACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.291530
544V7S|1|CACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.251530
554V6C|1|CACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.191530
564V7U|1|CACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.11530
574WF1|1|CACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.091539
584U1U|1|CACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.951539
594U20|1|CACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.91539
604U1V|1|CACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION31539
614U27|1|CACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.81539
624U25|1|CACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.91539
634U26|1|CACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.81539
644U24|1|CACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.91539
656I7V|1|BARibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.91533
664YBB|1|BAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.11533
675JC9|1|BAStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.031533
685J7L|1|BAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION31533
695J8A|1|BAStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.11533
705J91|1|BAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.961533
715J5B|1|BAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.81533
725IT8|1|BAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.121533
735J88|1|BAStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.321533
745J88|1|AAStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.321534
755JC9|1|AAStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.031534
765IT8|1|AAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.121534
775J7L|1|AAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION31534
785J8A|1|AAStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.11534
795J5B|1|AAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.81534
805J91|1|AAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.961534
814YBB|1|AAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.11534
826I7V|1|AARibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.91533
834U24|1|AACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.91538
844U26|1|AACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.81538
854U25|1|AACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.91538
864U27|1|AACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.81538
874U1V|1|AACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION31538
884U20|1|AACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.91538
894U1U|1|AACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.951538
904WF1|1|AACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.091538
914WWW|1|QACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.11533
924V7S|1|AACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.251533
934V6C|1|AACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.191533
944V7T|1|AACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.191533
954V7V|1|AACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.291533
964V7U|1|AACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.11533
974V9P|1|BAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
984V9P|1|DAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
994V9O|1|DAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1003JA1|1|SAActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.61542
1016VWL|1|170S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)ELECTRON MICROSCOPY3.11521
1026OGI|1|370S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)ELECTRON MICROSCOPY3.41539
1037BOI|1|ABacterial 30S ribosomal subunit assembly complex state F (multibody refinement for body domain of 30S ribosome)ELECTRON MICROSCOPY2.981078
1047BOG|1|ABacterial 30S ribosomal subunit assembly complex state E (body domain)ELECTRON MICROSCOPY2.751071
1057BOD|1|ABacterial 30S ribosomal subunit assembly complex state M (body domain)ELECTRON MICROSCOPY2.881078
1067N2V|1|16Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)ELECTRON MICROSCOPY2.541534
1073JBV|1|AMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.321530
1086WNV|1|370S ribosome without free 5S rRNA and with a perturbed PTCELECTRON MICROSCOPY3.51539
1096WD1|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)ELECTRON MICROSCOPY3.31539
1107LV0|1|3Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)ELECTRON MICROSCOPY3.21539
1117N2U|1|16Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformationELECTRON MICROSCOPY2.531534
1127N30|1|16Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformationELECTRON MICROSCOPY2.661526
1136WDF|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)ELECTRON MICROSCOPY3.31539
1146WDG|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)ELECTRON MICROSCOPY3.31539
1156GXO|1|aCryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)ELECTRON MICROSCOPY3.91539
1164V9D|1|AAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION31538
1174V9O|1|FAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1184V9O|1|BAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1194WOI|1|AA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION31538
1204V9C|1|CAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.31538
1214V6D|1|AACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.811533
1224V6E|1|AACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.711533
1236BY1|1|AAE. coli pH03H9 complexX-RAY DIFFRACTION3.941540
1246BY1|1|BAE. coli pH03H9 complexX-RAY DIFFRACTION3.941541
1256VWN|1|170S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)ELECTRON MICROSCOPY3.41508
1266VWM|1|170S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)ELECTRON MICROSCOPY3.41508
1277JSW|1|3ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)ELECTRON MICROSCOPY3.81539
1287JSZ|1|3ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV)ELECTRON MICROSCOPY3.71539
1297JSS|1|3ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II)ELECTRON MICROSCOPY3.71539
1307JT1|1|370S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)ELECTRON MICROSCOPY3.31539
1317JT2|1|370S ribosome stalled on long mRNA with ArfB bound in the A siteELECTRON MICROSCOPY3.51539
1326OFX|1|3Non-rotated ribosome (Structure I)ELECTRON MICROSCOPY3.31539
1336OGF|1|370S termination complex with RF2 bound to the UGA codon. Partially rotated ribosome with RF2 bound (Structure III).ELECTRON MICROSCOPY3.91539
1346OG7|1|370S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)ELECTRON MICROSCOPY3.31539
1357B5K|1|aE. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.ELECTRON MICROSCOPY2.91533
1366ZTN|1|AAE. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)ELECTRON MICROSCOPY3.91533
1373JCE|1|aStructure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.21533
1387K55|1|3Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)ELECTRON MICROSCOPY3.31539
1397K52|1|3Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)ELECTRON MICROSCOPY3.41539
1406ENJ|1|aPolyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)ELECTRON MICROSCOPY3.71539
1415O2R|1|aCryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeELECTRON MICROSCOPY3.41539
1423J9Y|1|aCryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.91539
1435KCS|1|1aCryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolutionELECTRON MICROSCOPY3.91539
1445L3P|1|aCryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexELECTRON MICROSCOPY3.71539
1456GWT|1|aCryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)ELECTRON MICROSCOPY3.81539
1466GXM|1|aCryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)ELECTRON MICROSCOPY3.81539
1476GXN|1|aCryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)ELECTRON MICROSCOPY3.91539
1485WE6|1|a70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.41539
1495WDT|1|a70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY31540
1505WE4|1|a70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.11540
1515WFS|1|a70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY31540
1526XZB|1|A1E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.541523
1536XZA|1|A1E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.661523
1546WNW|1|3Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNAELECTRON MICROSCOPY3.21539
1556WDA|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C)ELECTRON MICROSCOPY3.81539
1566WD8|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-A)ELECTRON MICROSCOPY3.71539
1576WDL|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B1)ELECTRON MICROSCOPY3.71539
1586WD9|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-B)ELECTRON MICROSCOPY3.71539
1596BU8|1|A70S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.51539
1606WDM|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B2)ELECTRON MICROSCOPY3.61539
1616WDE|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY31539
1626WDB|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A)ELECTRON MICROSCOPY41539
1636WDI|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2)ELECTRON MICROSCOPY41539
1646WDK|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A2)ELECTRON MICROSCOPY3.61539
1656WDD|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)ELECTRON MICROSCOPY3.21539
1665UYM|1|A70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.21539
1675UYQ|1|A70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)ELECTRON MICROSCOPY3.81539
1685KPX|1|26Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)ELECTRON MICROSCOPY3.91539
1695AFI|1|a2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.91539
1707NSQ|1|aStructure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAELECTRON MICROSCOPY3.11540
1715LZE|1|a+ 5LZE|1|y+ 5LZE|1|v+ 5LZE|1|xStructure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)ELECTRON MICROSCOPY3.51528
1725LZD|1|aStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)ELECTRON MICROSCOPY3.41539
1737N1P|1|16Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationELECTRON MICROSCOPY2.331542
1746ZTL|1|AAE. coli 70S-RNAP expressome complex in collided state bound to NusGELECTRON MICROSCOPY3.51533
1756ZTM|1|AAE. coli 70S-RNAP expressome complex in collided state without NusGELECTRON MICROSCOPY3.31533
1766ZTJ|1|AAE. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)ELECTRON MICROSCOPY3.41533
1776ZU1|1|AAE. coli 70S-RNAP expressome complex in uncoupled state 2ELECTRON MICROSCOPY31533
1786ZTO|1|AAE. coli 70S-RNAP expressome complex in uncoupled state 1ELECTRON MICROSCOPY31533
1796ZTP|1|AAE. coli 70S-RNAP expressome complex in uncoupled state 6ELECTRON MICROSCOPY31533
1807K00|1|AStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.981519
1814WOI|1|DA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION31539
1824V9C|1|AAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.31539
1834V9D|1|BAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION31539
1843JCJ|1|gStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationELECTRON MICROSCOPY3.71539
1855JTE|1|AACryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNAELECTRON MICROSCOPY3.61539
1865JU8|1|AACryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNAELECTRON MICROSCOPY3.61539
1875KCR|1|1aCryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolutionELECTRON MICROSCOPY3.61539
1886ORL|1|2RF1 pre-accommodated 70S complex at 24 msELECTRON MICROSCOPY3.51534
1896OSK|1|2RF1 accommodated 70S complex at 60 msELECTRON MICROSCOPY3.61534
1906OSQ|1|2RF1 accommodated state bound Release complex 70S at long incubation time pointELECTRON MICROSCOPY3.51534
1916Q9A|1|2Structure of tmRNA SmpB bound past E site of E. coli 70S ribosomeELECTRON MICROSCOPY3.71534
1925NWY|1|02.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexELECTRON MICROSCOPY2.91539
1936X7F|1|DCryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.51524
1946X7K|1|DCryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.11524
1956X6T|1|DCryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.21524
1966XDQ|1|DCryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 30 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.71524
1976VYR|1|DEscherichia coli transcription-translation complex A1 (TTC-A1) containing an 18 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-siteELECTRON MICROSCOPY3.81524
1986VU3|1|DCryo-EM structure of Escherichia coli transcription-translation complex A (TTC-A) containing mRNA with a 12 nt long spacerELECTRON MICROSCOPY3.71524
1996VYQ|1|DEscherichia coli transcription-translation complex A1 (TTC-A1) containing an 15 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-siteELECTRON MICROSCOPY3.71524
2006VYS|1|DEscherichia coli transcription-translation complex A1 (TTC-A1) containing a 21 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-siteELECTRON MICROSCOPY3.71524
2015MDZ|1|2Structure of the 70S ribosome (empty A site)ELECTRON MICROSCOPY3.11534
2025MDW|1|2Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.061534
2035MDY|1|2Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.351534
2045MDV|1|2Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.971534
2056C4I|1|aConformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.241534
2066ORE|1|2Release complex 70SELECTRON MICROSCOPY2.91534
2076OM6|1|2Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNAELECTRON MICROSCOPY3.11534
2086YSU|1|aStructure of the P+0 ArfB-ribosome complex in the post-hydrolysis stateELECTRON MICROSCOPY3.71540
2096YSS|1|aStructure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateELECTRON MICROSCOPY2.61540
2106YSR|1|aStructure of the P+9 stalled ribosome complexELECTRON MICROSCOPY3.11539
2116SZS|1|aRelease factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilisELECTRON MICROSCOPY3.061540
2127NSO|1|aStructure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNAELECTRON MICROSCOPY2.91540
2135MGP|1|aStructural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsELECTRON MICROSCOPY3.11539
2147N31|1|16Elongating 70S ribosome complex in a post-translocation (POST) conformationELECTRON MICROSCOPY2.691533
2155LZA|1|aStructure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)ELECTRON MICROSCOPY3.61539
2166H4N|1|aStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeELECTRON MICROSCOPY31534
2176Y69|1|aCryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXELECTRON MICROSCOPY2.861539
2186O9K|1|a70S initiation complexELECTRON MICROSCOPY41539
2193JCD|1|aStructure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)ELECTRON MICROSCOPY3.71533
2207D6Z|1|fMolecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factorELECTRON MICROSCOPY3.41539
2216TC3|1|16S1Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)ELECTRON MICROSCOPY2.71534
2226TBV|1|16S1Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)ELECTRON MICROSCOPY2.71534
2235H5U|1|hMechanistic insights into the alternative translation termination by ArfA and RF2ELECTRON MICROSCOPY3.011534
2245NP6|1|D70S structure prior to bypassingELECTRON MICROSCOPY3.61539
2256Q97|1|2Structure of tmRNA SmpB bound in A site of E. coli 70S ribosomeELECTRON MICROSCOPY3.91534
2263JBU|1|AMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.641530
2273J9Z|1|SAActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.61542
2286OT3|1|2RF2 accommodated state bound Release complex 70S at 24 msELECTRON MICROSCOPY3.91534
2296OUO|1|2RF2 accommodated state bound 70S complex at long incubation timeELECTRON MICROSCOPY3.71534
2306DNC|1|AE.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codonELECTRON MICROSCOPY3.71539
2315U9F|1|A3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.21539
2325U9G|1|A3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.21539
2335WF0|1|a70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)ELECTRON MICROSCOPY3.61540
2345WFK|1|a70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.41540
2356ENU|1|aPolyproline-stalled ribosome in the presence of elongation-factor P (EF-P)ELECTRON MICROSCOPY3.11539
2366ENF|1|aCryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PELECTRON MICROSCOPY3.21539
2377K53|1|3Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)ELECTRON MICROSCOPY3.21539
2387K50|1|3Pre-translocation non-frameshifting(CCA-A) complex (Structure I)ELECTRON MICROSCOPY3.41539
2396WDJ|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A1)ELECTRON MICROSCOPY3.71539
2406WD7|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D)ELECTRON MICROSCOPY3.91539
2416WD6|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C2)ELECTRON MICROSCOPY3.71539
2426WD4|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B2)ELECTRON MICROSCOPY3.71539
2436WD2|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-A)ELECTRON MICROSCOPY3.61539
2446WD5|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C1)ELECTRON MICROSCOPY3.61539
2456WD3|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B1)ELECTRON MICROSCOPY3.61539
2466WD0|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)ELECTRON MICROSCOPY31539
2475UYL|1|A70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)ELECTRON MICROSCOPY3.61539
2485UYK|1|A70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)ELECTRON MICROSCOPY3.91539
2495UYN|1|A70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)ELECTRON MICROSCOPY41539
2505UYP|1|A70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)ELECTRON MICROSCOPY3.91539
2515KPS|1|27Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)ELECTRON MICROSCOPY3.91539
2525KPW|1|26Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)ELECTRON MICROSCOPY3.91539
2535IQR|1|2Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY31533
2545U4I|1|aStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.51533
2555U4J|1|aStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.7307
2567AF3|1|1Bacterial 30S ribosomal subunit assembly complex state M (head domain)ELECTRON MICROSCOPY2.82456
2577AF8|1|1Bacterial 30S ribosomal subunit assembly complex state E (head domain)ELECTRON MICROSCOPY2.75456
2587AFA|1|1Bacterial 30S ribosomal subunit assembly complex state F (head domain)ELECTRON MICROSCOPY2.95456
2597AF5|1|1Bacterial 30S ribosomal subunit assembly complex state I (head domain)ELECTRON MICROSCOPY2.96456
2607AFH|1|1Bacterial 30S ribosomal subunit assembly complex state C (head domain)ELECTRON MICROSCOPY3.59456
2617AFD|1|1Bacterial 30S ribosomal subunit assembly complex state A (head domain)ELECTRON MICROSCOPY3.44456
2627AFN|1|1Bacterial 30S ribosomal subunit assembly complex state B (head domain)ELECTRON MICROSCOPY3.86456

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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