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Equivalence class NR_4.0_59782.2 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
18Y05|1|B+ 8Y05|1|C+ 8Y05|1|D (rep)DNA (5'-D(*CP*GP*TP*CP*CP*TP*TP*TP*AP*TP*T)-3'), DNA (5'-D(P*CP*TP*GP*GP*AP*TP*GP*CP*GP*TP*AP*AP*AP*GP*GP*AP*CP*G)-3'), RNA (29-MER)Lachnospiraceae bacterium ND2006Crystal structure of LbCas12a in complex with crRNA and 9nt target DNAX-ray diffraction3.1582025-01-01
28Y06|1|B+ 8Y06|1|C+ 8Y06|1|DDNA (5'-D(*CP*GP*TP*CP*CP*TP*TP*TP*AP*TP*T)-3'), DNA (5'-D(P*TP*TP*AP*CP*TP*GP*GP*AP*TP*GP*CP*GP*TP*AP*AP*AP*GP*GP*AP*CP*G)-3'), RNA (34-MER)Lachnospiraceae bacterium ND2006Crystal structure of LbCas12a in complex with crRNA and 12nt target DNAX-ray diffraction3.99662025-01-01
38Y09|1|B+ 8Y09|1|C+ 8Y09|1|DDNA (5'-D(*CP*GP*TP*CP*CP*TP*TP*TP*AP*TP*T)-3'), DNA (5'-D(P*CP*TP*TP*TP*AP*CP*TP*GP*GP*AP*TP*GP*CP*GP*TP*AP*AP*AP*GP*GP*AP*CP*G)-3'), RNA (34-MER)Lachnospiraceae bacterium ND2006Crystal structure of LbCas12a in complex with crRNA and 15nt target DNAX-ray diffraction2.87682025-01-01
48Y07|1|B+ 8Y07|1|C+ 8Y07|1|DDNA (5'-D(*CP*GP*TP*CP*CP*TP*TP*TP*AP*TP*T)-3'), DNA (5'-D(P*TP*TP*TP*AP*CP*TP*GP*GP*AP*TP*GP*CP*GP*TP*AP*AP*AP*GP*GP*AP*CP*G)-3'), RNA (33-MER)Lachnospiraceae bacterium ND2006Crystal structure of LbCas12a in complex with crRNA and 13nt target DNAX-ray diffraction2.85662025-01-01
58Y07|1|F+ 8Y07|1|G+ 8Y07|1|HDNA (5'-D(*CP*GP*TP*CP*CP*TP*TP*TP*AP*TP*T)-3'), DNA (5'-D(P*TP*TP*TP*AP*CP*TP*GP*GP*AP*TP*GP*CP*GP*TP*AP*AP*AP*GP*GP*AP*CP*G)-3'), RNA (33-MER)Lachnospiraceae bacterium ND2006Crystal structure of LbCas12a in complex with crRNA and 13nt target DNAX-ray diffraction2.85662025-01-01
68Y09|1|F+ 8Y09|1|G+ 8Y09|1|HDNA (5'-D(*CP*GP*TP*CP*CP*TP*TP*TP*AP*TP*T)-3'), DNA (5'-D(P*CP*TP*TP*TP*AP*CP*TP*GP*GP*AP*TP*GP*CP*GP*TP*AP*AP*AP*GP*GP*AP*CP*G)-3'), RNA (34-MER)Lachnospiraceae bacterium ND2006Crystal structure of LbCas12a in complex with crRNA and 15nt target DNAX-ray diffraction2.87682025-01-01
78Y04|1|B+ 8Y04|1|C+ 8Y04|1|DDNA (5'-D(*CP*GP*TP*CP*CP*TP*TP*TP*AP*TP*T)-3'), DNA (5'-D(P*GP*AP*TP*GP*CP*GP*TP*AP*AP*AP*GP*GP*AP*CP*G)-3'), RNA (29-MER)Lachnospiraceae bacterium ND2006Crystal structure of LbCas12a in complex with crRNA and 6nt target DNAX-ray diffraction3.71552025-01-01
88Y0A|1|F+ 8Y0A|1|G+ 8Y0A|1|HDNA (27-MER), DNA (5'-D(*CP*GP*TP*CP*CP*TP*TP*TP*AP*TP*T)-3'), RNA (38-MER)Lachnospiraceae bacterium ND2006Crystal structure of LbCas12a in complex with crRNA and 18nt target DNAX-ray diffraction3.51762025-01-01
98Y0A|1|B+ 8Y0A|1|C+ 8Y0A|1|DDNA (27-MER), DNA (5'-D(*CP*GP*TP*CP*CP*TP*TP*TP*AP*TP*T)-3'), RNA (38-MER)Lachnospiraceae bacterium ND2006Crystal structure of LbCas12a in complex with crRNA and 18nt target DNAX-ray diffraction3.51762025-01-01
108Y08|1|B+ 8Y08|1|C+ 8Y08|1|DDNA (5'-D(*CP*GP*TP*CP*CP*TP*TP*TP*AP*TP*T)-3'), DNA (5'-D(P*CP*TP*TP*TP*AP*CP*TP*GP*GP*AP*TP*GP*CP*GP*TP*AP*AP*AP*GP*GP*AP*CP*G)-3'), RNA (35-MER)Lachnospiraceae bacterium ND2006Crystal structure of LbCas12a in complex with crRNA and 14nt target DNAX-ray diffraction3.64692025-01-01
118Y08|1|F+ 8Y08|1|G+ 8Y08|1|HDNA (5'-D(*CP*GP*TP*CP*CP*TP*TP*TP*AP*TP*T)-3'), DNA (5'-D(P*CP*TP*TP*TP*AP*CP*TP*GP*GP*AP*TP*GP*CP*GP*TP*AP*AP*AP*GP*GP*AP*CP*G)-3'), RNA (35-MER)Lachnospiraceae bacterium ND2006Crystal structure of LbCas12a in complex with crRNA and 14nt target DNAX-ray diffraction3.64692025-01-01

Release history

Release3.3783.3793.3803.3813.382
Date2025-03-132025-03-192025-03-262025-04-022025-04-09

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
18Y07|1|B+ 8Y07|1|C+ 8Y07|1|DCrystal structure of LbCas12a in complex with crRNA and 13nt target DNAX-RAY DIFFRACTION2.8566
28Y09|1|B+ 8Y09|1|C+ 8Y09|1|DCrystal structure of LbCas12a in complex with crRNA and 15nt target DNAX-RAY DIFFRACTION2.8768
38Y09|1|F+ 8Y09|1|G+ 8Y09|1|HCrystal structure of LbCas12a in complex with crRNA and 15nt target DNAX-RAY DIFFRACTION2.8768
48Y07|1|F+ 8Y07|1|G+ 8Y07|1|HCrystal structure of LbCas12a in complex with crRNA and 13nt target DNAX-RAY DIFFRACTION2.8566
58Y0A|1|F+ 8Y0A|1|G+ 8Y0A|1|HCrystal structure of LbCas12a in complex with crRNA and 18nt target DNAX-RAY DIFFRACTION3.5176
68Y08|1|B+ 8Y08|1|C+ 8Y08|1|DCrystal structure of LbCas12a in complex with crRNA and 14nt target DNAX-RAY DIFFRACTION3.6469
78Y08|1|F+ 8Y08|1|G+ 8Y08|1|HCrystal structure of LbCas12a in complex with crRNA and 14nt target DNAX-RAY DIFFRACTION3.6469
88Y0A|1|B+ 8Y0A|1|C+ 8Y0A|1|DCrystal structure of LbCas12a in complex with crRNA and 18nt target DNAX-RAY DIFFRACTION3.5176
98Y05|1|B+ 8Y05|1|C+ 8Y05|1|DCrystal structure of LbCas12a in complex with crRNA and 9nt target DNAX-RAY DIFFRACTION3.158
108Y04|1|B+ 8Y04|1|C+ 8Y04|1|DCrystal structure of LbCas12a in complex with crRNA and 6nt target DNAX-RAY DIFFRACTION3.7155
118Y06|1|B+ 8Y06|1|C+ 8Y06|1|DCrystal structure of LbCas12a in complex with crRNA and 12nt target DNAX-RAY DIFFRACTION3.9966

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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