RNA 3D Hub //

Equivalence class NR_4.0_67726.3 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
15F9F|1|F (rep)RNA (5'-R(*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-ray diffraction2.6242016-01-13
25F9F|1|LRNA (5'-R(*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-ray diffraction2.6242016-01-13
35F9F|1|HRNA (5'-R(*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-ray diffraction2.6242016-01-13
45F9F|1|BRNA (5'-R(*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-ray diffraction2.6242016-01-13
55F9F|1|JRNA (5'-R(*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-ray diffraction2.6242016-01-13
65F9F|1|DRNA (5'-R(*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-ray diffraction2.6242016-01-13
75F9H|1|FRNA (5'-R(P*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructCrystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-ray diffraction3.1232016-01-13
85F98|1|DRNA (5'-R(P*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructCrystal structure of RIG-I in complex with Cap-0 RNAX-ray diffraction3.28242016-01-13
95F98|1|BRNA (5'-R(P*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructCrystal structure of RIG-I in complex with Cap-0 RNAX-ray diffraction3.28242016-01-13
105F9H|1|LRNA (5'-R(P*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructCrystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-ray diffraction3.1232016-01-13
115F98|1|LRNA (5'-R(P*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructCrystal structure of RIG-I in complex with Cap-0 RNAX-ray diffraction3.28242016-01-13
125F98|1|JRNA (5'-R(P*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructCrystal structure of RIG-I in complex with Cap-0 RNAX-ray diffraction3.28242016-01-13
135F98|1|HRNA (5'-R(P*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructCrystal structure of RIG-I in complex with Cap-0 RNAX-ray diffraction3.28242016-01-13
145F98|1|FRNA (5'-R(P*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructCrystal structure of RIG-I in complex with Cap-0 RNAX-ray diffraction3.28242016-01-13
155F9H|1|JRNA (5'-R(P*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructCrystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-ray diffraction3.1232016-01-13
165F9H|1|DRNA (5'-R(P*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructCrystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-ray diffraction3.1232016-01-13
175F9H|1|BRNA (5'-R(P*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructCrystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-ray diffraction3.1232016-01-13
185F9H|1|HRNA (5'-R(P*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructCrystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-ray diffraction3.1232016-01-13

Release history

Release3.3783.3793.3803.3813.3823.3833.3843.3853.3863.3873.3883.3893.3903.3913.3923.3933.3943.3953.3963.3973.3983.399
Date2025-03-132025-03-192025-03-262025-04-022025-04-092025-04-162025-04-232025-04-302025-05-072025-05-142025-05-212025-05-282025-06-042025-06-112025-06-182025-06-252025-07-022025-07-092025-07-162025-07-232025-07-302025-08-06

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
15F9F|1|HCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-RAY DIFFRACTION2.624
25F9F|1|FCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-RAY DIFFRACTION2.624
35F9F|1|LCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-RAY DIFFRACTION2.624
45F9F|1|BCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-RAY DIFFRACTION2.624
55F9F|1|JCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-RAY DIFFRACTION2.624
65F9F|1|DCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-RAY DIFFRACTION2.624
75F98|1|BCrystal structure of RIG-I in complex with Cap-0 RNAX-RAY DIFFRACTION3.2824
85F9H|1|HCrystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-RAY DIFFRACTION3.123
95F9H|1|JCrystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-RAY DIFFRACTION3.123
105F9H|1|BCrystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-RAY DIFFRACTION3.123
115F9H|1|FCrystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-RAY DIFFRACTION3.123
125F9H|1|LCrystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-RAY DIFFRACTION3.123
135F9H|1|DCrystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-RAY DIFFRACTION3.123
145F98|1|HCrystal structure of RIG-I in complex with Cap-0 RNAX-RAY DIFFRACTION3.2824
155F98|1|DCrystal structure of RIG-I in complex with Cap-0 RNAX-RAY DIFFRACTION3.2824
165F98|1|FCrystal structure of RIG-I in complex with Cap-0 RNAX-RAY DIFFRACTION3.2824
175F98|1|LCrystal structure of RIG-I in complex with Cap-0 RNAX-RAY DIFFRACTION3.2824
185F98|1|JCrystal structure of RIG-I in complex with Cap-0 RNAX-RAY DIFFRACTION3.2824

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.1609 s