NR_4.0_71228.6

Members (16)
History
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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	8C3A\|1\|1 (rep)	Large subunit ribosomal RNA	25S	Candida albicans	Eukarya	RF02543	Crystal structure of ailanthone bound to the Candida albicans 80S ribosome	X-ray diffraction	3	2024-01-10
2	8C3A\|1\|AS	Large subunit ribosomal RNA	25S	Candida albicans	Eukarya	RF02543	Crystal structure of ailanthone bound to the Candida albicans 80S ribosome	X-ray diffraction	3	2024-01-10
3	8CRE\|1\|AS+ 8CRE\|1\|AU	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S, 5.8S	Candida albicans	Eukarya	RF02543 + RF00002	Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418	X-ray diffraction	3	2024-09-18
4	8CRE\|1\|1+ 8CRE\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S, 5.8S	Candida albicans	Eukarya	RF02543 + RF00002	Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418	X-ray diffraction	3	2024-09-18
5	8CQ7\|1\|AS+ 8CQ7\|1\|AU	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S, 5.8S	Candida albicans	Eukarya	RF02543 + RF00002	Crystal structure of phyllanthoside bound to the Candida albicans 80S ribosome	X-ray diffraction	3.2	2024-09-11
6	8CQ7\|1\|1+ 8CQ7\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S, 5.8S	Candida albicans	Eukarya	RF02543 + RF00002	Crystal structure of phyllanthoside bound to the Candida albicans 80S ribosome	X-ray diffraction	3.2	2024-09-11
7	8CQW\|1\|AS+ 8CQW\|1\|AU	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S, 5.8S	Candida albicans	Eukarya	RF02543 + RF00002	Crystal structure of the Candida albicans 80S ribosome in complex with Hygromycin B	X-ray diffraction	3.05	2024-09-18
8	8CQW\|1\|1+ 8CQW\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S, 5.8S	Candida albicans	Eukarya	RF02543 + RF00002	Crystal structure of the Candida albicans 80S ribosome in complex with Hygromycin B	X-ray diffraction	3.05	2024-09-18
9	8OEQ\|1\|1	Large subunit ribosomal RNA	25S ribosomal RNA	Candida albicans	Eukarya	RF02543	Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (250uM)	X-ray diffraction	3.3	2024-09-25
10	8OEQ\|1\|AS	Large subunit ribosomal RNA	25S ribosomal RNA	Candida albicans	Eukarya	RF02543	Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (250uM)	X-ray diffraction	3.3	2024-09-25
11	7PZY\|1\|1+ 7PZY\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Candida albicans SC5314	Eukarya	RF02543 + RF00002	Structure of the vacant Candida albicans 80S ribosome	Electron microscopy	2.32	2022-05-18
12	7Q08\|1\|1+ 7Q08\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Candida albicans SC5314	Eukarya	RF02543 + RF00002	Structure of Candida albicans 80S ribosome in complex with cycloheximide	Electron microscopy	2.56	2022-05-25
13	8Q5I\|1\|1+ 8Q5I\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Candida albicans	Eukarya	RF02543 + RF00002	Structure of Candida albicans 80S ribosome in complex with cephaeline	Electron microscopy	2.45	2023-09-13
14	7Q0F\|1\|1+ 7Q0F\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Candida albicans SC5314	Eukarya	RF02543 + RF00002	Structure of Candida albicans 80S ribosome in complex with phyllanthoside	Electron microscopy	2.64	2022-05-18
15	7Q0R\|1\|1+ 7Q0R\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Candida albicans SC5314	Eukarya	RF02543 + RF00002	Structure of the Candida albicans 80S ribosome in complex with blasticidin s	Electron microscopy	2.67	2022-05-25
16	7Q0P\|1\|1+ 7Q0P\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Candida albicans SC5314	Eukarya	RF02543 + RF00002	Structure of the Candida albicans 80S ribosome in complex with anisomycin	Electron microscopy	2.77	2022-05-18

Release history

Release	3.354
Date	2024-09-25

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	View	PDB	Title	Method	Resolution	Length
1		8C3A\|1\|1	Crystal structure of ailanthone bound to the Candida albicans 80S ribosome	X-RAY DIFFRACTION	3	3217
2		8CQW\|1\|1+ 8CQW\|1\|4	Crystal structure of the Candida albicans 80S ribosome in complex with Hygromycin B	X-RAY DIFFRACTION	3.05	3359
3		8CRE\|1\|1+ 8CRE\|1\|4	Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418	X-RAY DIFFRACTION	3	3359
4		8CQ7\|1\|1+ 8CQ7\|1\|4	Crystal structure of phyllanthoside bound to the Candida albicans 80S ribosome	X-RAY DIFFRACTION	3.2	3359
5		8OEQ\|1\|1	Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (250uM)	X-RAY DIFFRACTION	3.3	3359
6		8Q5I\|1\|1+ 8Q5I\|1\|4	Structure of Candida albicans 80S ribosome in complex with cephaeline	ELECTRON MICROSCOPY	2.45	3071
7		7Q0P\|1\|1+ 7Q0P\|1\|4	Structure of the Candida albicans 80S ribosome in complex with anisomycin	ELECTRON MICROSCOPY	2.77	3207
8		7Q0R\|1\|1+ 7Q0R\|1\|4	Structure of the Candida albicans 80S ribosome in complex with blasticidin s	ELECTRON MICROSCOPY	2.67	3207
9		7PZY\|1\|1+ 7PZY\|1\|4	Structure of the vacant Candida albicans 80S ribosome	ELECTRON MICROSCOPY	2.32	3207
10		7Q08\|1\|1+ 7Q08\|1\|4	Structure of Candida albicans 80S ribosome in complex with cycloheximide	ELECTRON MICROSCOPY	2.56	3207
11		7Q0F\|1\|1+ 7Q0F\|1\|4	Structure of Candida albicans 80S ribosome in complex with phyllanthoside	ELECTRON MICROSCOPY	2.64	3207
12		8OEQ\|1\|AS	Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (250uM)	X-RAY DIFFRACTION	3.3	3359
13		8CQ7\|1\|AS+ 8CQ7\|1\|AU	Crystal structure of phyllanthoside bound to the Candida albicans 80S ribosome	X-RAY DIFFRACTION	3.2	3359
14		8CRE\|1\|AS+ 8CRE\|1\|AU	Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418	X-RAY DIFFRACTION	3	3359
15		8CQW\|1\|AS+ 8CQW\|1\|AU	Crystal structure of the Candida albicans 80S ribosome in complex with Hygromycin B	X-RAY DIFFRACTION	3.05	3359
16		8C3A\|1\|AS	Crystal structure of ailanthone bound to the Candida albicans 80S ribosome	X-RAY DIFFRACTION	3	3229

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

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