1 | 3PEY|1|B (rep) | | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | | | | S. cerevisiae Dbp5 bound to RNA and ADP BeF3 | X-ray diffraction | 1.4 | 6 | 2011-03-23 |
2 | 3PEW|1|B | | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | | | | S. cerevisiae Dbp5 L327V bound to RNA and ADP BeF3 | X-ray diffraction | 1.5 | 6 | 2011-03-23 |
3 | 5ELX|1|B | | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | Saccharomyces cerevisiae | | | S. cerevisiae Dbp5 bound to RNA and mant-ADP BeF3 | X-ray diffraction | 1.81 | 6 | 2016-02-24 |
4 | 4ALP|1|E | | HEXA URIDINE | synthetic construct | | | The Lin28b Cold shock domain in complex with hexauridine | X-ray diffraction | 1.48 | 6 | 2012-09-05 |
5 | 3O8C|1|C | | RNA (5'-R(P*UP*(5BU)P*UP*UP*UP*U)-3') | | | | Visualizing ATP-dependent RNA Translocation by the NS3 Helicase from HCV | X-ray diffraction | 2 | 6 | 2011-01-05 |
6 | 2HYI|1|F | | 5'-R(*UP*UP*UP*UP*UP*U)-3' | | | | Structure of the human exon junction complex with a trapped DEAD-box helicase bound to RNA | X-ray diffraction | 2.3 | 6 | 2006-08-15 |
7 | 6G2K|1|R | | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | synthetic construct | | | Structure of HuR RRM3 in complex with RNA (UUUUUU) | X-ray diffraction | 2.01 | 6 | 2018-10-31 |
8 | 5BTE|1|D | | RNA (5'-R(P*UP*(U37)P*(U37)P*UP*UP*U)-3') | Homo sapiens | | | Crystal structure of Ashbya gossypii Rai1 in complex with pU(S)6-Mn2+ | X-ray diffraction | 2.4 | 6 | 2015-07-22 |
9 | 2HYI|1|L | | 5'-R(*UP*UP*UP*UP*UP*U)-3' | | | | Structure of the human exon junction complex with a trapped DEAD-box helicase bound to RNA | X-ray diffraction | 2.3 | 6 | 2006-08-15 |
10 | 5BTE|1|C | | RNA (5'-R(P*UP*(U37)P*(U37)P*UP*UP*U)-3') | Homo sapiens | | | Crystal structure of Ashbya gossypii Rai1 in complex with pU(S)6-Mn2+ | X-ray diffraction | 2.4 | 6 | 2015-07-22 |
11 | 3EX7|1|J | | RNA (5'-R(*UP*UP*UP*UP*UP*U)-3') | | | | The crystal structure of EJC in its transition state | X-ray diffraction | 2.3 | 6 | 2008-12-09 |
12 | 6WRE|1|D | | RNA (5'-R(*UP*(U37)P*(U37)P*UP)-3') | Homo sapiens | | | Crystal structure of mouse DXO in complex with 5'-OH RNA substrate mimic and calcium ion | X-ray diffraction | 2 | 5 | 2020-05-13 |
13 | 5SZE|1|C | | RNA (5'-R(P*UP*UP*U)-3') | unidentified | | | Crystal structure of Aquifex aeolicus Hfq-RNA complex at 1.5A | X-ray diffraction | 1.5 | 3 | 2017-04-12 |
14 | 3EX7|1|F | | RNA (5'-R(*UP*UP*UP*UP*UP*U)-3') | | | | The crystal structure of EJC in its transition state | X-ray diffraction | 2.3 | 6 | 2008-12-09 |
15 | 3PF5|1|R | | hexaribouracil (rU6) | | | | Crystal structure of Bs-CspB in complex with rU6 | X-ray diffraction | 1.68 | 5 | 2011-09-21 |
16 | 3O8R|1|C | | RNA (5'-R(P*UP*(5BU)P*UP*UP*UP*U)-3') | | | | Visualizing ATP-dependent RNA Translocation by the NS3 Helicase from HCV | X-ray diffraction | 2.3 | 6 | 2011-01-05 |
17 | 7SOW|1|B | | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | synthetic construct | | | LaM domain of human LARP1 in complex with UUUUUU | X-ray diffraction | 1.3 | 4 | 2022-11-09 |
18 | 6I0U|1|B | | RNA (5'-R(*UP*UP*UP*U)-3') | Drosophila melanogaster | | | Crystal structure of DmTailor in complex with U6 RNA | X-ray diffraction | 2 | 4 | 2018-12-05 |
19 | 5ZSA|1|C | | RNA (5'-R(P*UP*UP*UP*U)-3') | synthetic construct | | | Crystal structure of monkey TLR7 in complex with IMDQ and UUUUUU | X-ray diffraction | 2.5 | 4 | 2019-01-30 |
20 | 5ZSA|1|D | | RNA (5'-R(P*UP*UP*UP*U)-3') | synthetic construct | | | Crystal structure of monkey TLR7 in complex with IMDQ and UUUUUU | X-ray diffraction | 2.5 | 4 | 2019-01-30 |
21 | 4NL3|1|Z | | 5'-R(*UP*UP*UP*UP*UP*U)-3' | | | | Crystal Structure of Listeria monocytogenes Hfq in complex with U6 RNA | X-ray diffraction | 3.1 | 6 | 2014-09-10 |
22 | 6CAP|1|Y | | RNA (5'-R(*UP*UP*UP*UP*UP*U)-3') | Thermus thermophilus | | | Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with Sisomicin | X-ray diffraction | 3.4 | 6 | 2018-07-25 |
23 | 7DUI|1|Y | | RNA (5'-R(*UP*UP*UP*UP*UP*U)-3') | Thermus thermophilus | | | Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''PyrS bound | X-ray diffraction | 3.62 | 6 | 2022-01-12 |
24 | 7DUL|1|Y | | RNA (5'-R(*UP*UP*UP*UP*UP*U)-3') | Thermus thermophilus | | | Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N3''MS bound | X-ray diffraction | 3.62 | 6 | 2022-01-26 |
25 | 4Y91|1|O | | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | synthetic construct | | | Crystal Structure of a Thermotoga maritima Hfq homolog | X-ray diffraction | 2.66 | 6 | 2016-03-16 |
26 | 4Y91|1|N | | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | synthetic construct | | | Crystal Structure of a Thermotoga maritima Hfq homolog | X-ray diffraction | 2.66 | 6 | 2016-03-16 |
27 | 4V6E|1|AW | | messenger RNA | | | | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.71 | 6 | 2014-07-09 |
28 | 6CAS|1|Y | | RNA (5'-R(*UP*UP*UP*UP*UP*U)-3') | Thermus thermophilus | | | Serial Femtosecond X-ray Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with N1MS | X-ray diffraction | 3.5 | 6 | 2018-07-25 |
29 | 6CAR|1|Y | | RNA (5'-R(*UP*UP*UP*UP*UP*U)-3') | Thermus thermophilus | | | Serial Femtosecond X-ray Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with Sisomicin | X-ray diffraction | 3.4 | 6 | 2018-07-25 |
30 | 4NL3|1|R | | 5'-R(*UP*UP*UP*UP*UP*U)-3' | | | | Crystal Structure of Listeria monocytogenes Hfq in complex with U6 RNA | X-ray diffraction | 3.1 | 6 | 2014-09-10 |
31 | 1N33|1|Z | | A-SITE MESSENGER RNA FRAGMENT | Thermus thermophilus | | | Structure of the Thermus thermophilus 30S ribosomal subunit bound to codon and near-cognate transfer rna anticodon stem-loop mismatched at the second codon position at the a site with paromomycin | X-ray diffraction | 3.35 | 4 | 2002-11-29 |
32 | 1N34|1|Z | | A-SITE MESSENGER RNA FRAGMENT | Thermus thermophilus | | | Structure of the Thermus thermophilus 30S ribosomal subunit in the presence of codon and crystallographically disordered near-cognate transfer rna anticodon stem-loop mismatched at the first codon position | X-ray diffraction | 3.8 | 4 | 2002-11-29 |
33 | 3PF5|1|S | | hexaribouracil (rU6) | | | | Crystal structure of Bs-CspB in complex with rU6 | X-ray diffraction | 1.68 | 1 | 2011-09-21 |
34 | 6PPN|1|A | | Mimic of unprocessed U6 snRNA | synthetic construct | | | Structure of S. pombe Lsm2-8 with unprocessed U6 snRNA | X-ray diffraction | 1.91 | 5 | 2020-06-17 |
35 | 6PPN|1|I | | Mimic of unprocessed U6 snRNA | synthetic construct | | | Structure of S. pombe Lsm2-8 with unprocessed U6 snRNA | X-ray diffraction | 1.91 | 5 | 2020-06-17 |
36 | 7DUK|1|Y | | RNA (5'-R(*UP*UP*UP*UP*UP*U)-3') | Thermus thermophilus | | | Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1,3''MS bound | X-ray diffraction | 3.6 | 6 | 2022-01-12 |
37 | 7DUJ|1|Y | | RNA (5'-R(*UP*UP*UP*UP*UP*U)-3') | Thermus thermophilus | | | Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1,3''Bz bound | X-ray diffraction | 3.75 | 6 | 2022-01-12 |
38 | 7DUH|1|Y | | RNA (5'-R(*UP*UP*UP*UP*UP*U)-3') | Thermus thermophilus | | | Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''AC bound | X-ray diffraction | 3.75 | 6 | 2022-01-26 |
39 | 7DUG|1|Y | | RNA (5'-R(UPUPUPUPUPU)-3') | Thermus thermophilus | | | Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''TFMS bound | X-ray diffraction | 3.75 | 6 | 2022-01-12 |
40 | 7ZNJ|1|E | | RNA | Homo sapiens | | | Structure of an ALYREF-exon junction complex hexamer | Electron microscopy | 2.4 | 6 | 2023-04-12 |
41 | 7ZNJ|1|J | | RNA | Homo sapiens | | | Structure of an ALYREF-exon junction complex hexamer | Electron microscopy | 2.4 | 6 | 2023-04-12 |
42 | 7ZNJ|1|O | | RNA | Homo sapiens | | | Structure of an ALYREF-exon junction complex hexamer | Electron microscopy | 2.4 | 6 | 2023-04-12 |
43 | 7ZNJ|1|e | | RNA | Homo sapiens | | | Structure of an ALYREF-exon junction complex hexamer | Electron microscopy | 2.4 | 6 | 2023-04-12 |
44 | 7ZNJ|1|j | | RNA | Homo sapiens | | | Structure of an ALYREF-exon junction complex hexamer | Electron microscopy | 2.4 | 6 | 2023-04-12 |
45 | 7ZNJ|1|o | | RNA | Homo sapiens | | | Structure of an ALYREF-exon junction complex hexamer | Electron microscopy | 2.4 | 6 | 2023-04-12 |
46 | 8RDV|1|Y | | Heterogenous mRNA | Psychrobacter urativorans | | | Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon, mRNA and P-site tRNA (structure 2). | Electron microscopy | 2.6 | 6 | 2024-02-21 |
47 | 7EXA|1|B | | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | Escherichia coli | | | Structure of mumps virus nucleoprotein without C-arm | Electron microscopy | 2.9 | 6 | 2024-08-21 |
48 | 6M7D|1|B | | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | synthetic construct | | | Structure of ncleoprotein of sendai virus | Electron microscopy | 2.9 | 6 | 2021-03-24 |
49 | 7YPW|1|R | | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | synthetic construct | | | Lloviu cuevavirus nucleoprotein-RNA complex | Electron microscopy | 3.0356 | 6 | 2023-04-19 |
50 | 7F1M|1|R | | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | synthetic construct | | | Marburg virus nucleoprotein-RNA complex | Electron microscopy | 3.1 | 6 | 2022-03-09 |
51 | 7F1M|1|S | | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | synthetic construct | | | Marburg virus nucleoprotein-RNA complex | Electron microscopy | 3.1 | 6 | 2022-03-09 |
52 | 7YR8|1|R | | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | synthetic construct | | | Lloviu cuevavirus nucleoprotein(1-450 residues)-RNA complex | Electron microscopy | 3.2 | 6 | 2023-04-19 |
53 | 9FIA|1|bV | | ulr20 | Toxoplasma gondii | | | SSU(body) structure derived from the SSU sample of the mitoribosome from T. gondii. | Electron microscopy | 3.29 | 6 | 2024-12-11 |
54 | 8VFT|1|w | | mRNA | Oryctolagus cuniculus | | | Translating 80S rabbit ribosome stalled by emetine with eEF2 | Electron microscopy | 3.3 | 6 | 2024-12-25 |
55 | 8CBW|1|1 | | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | Escherichia coli BL21(DE3) | | | CryoEM structure of the Hendra henipavirus nucleocapsid sauronoid assembly monomer | Electron microscopy | 3.485 | 6 | 2024-06-26 |
56 | 7EWQ|1|B | | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | Mumps orthorubulavirus | | | Structure of Mumps virus nucleocapsid ring | Electron microscopy | 3.5 | 6 | 2021-06-23 |
57 | 7QDZ|1|E | | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | Homo sapiens | | | 80S-bound human SKI complex in the closed state | Electron microscopy | 3.6 | 6 | 2022-02-09 |
58 | 5Z9W|1|R | | RNA (6-MER) | synthetic construct | | | Ebola virus nucleoprotein-RNA complex | Electron microscopy | 3.6 | 6 | 2018-10-24 |
59 | 7NSJ|1|AX | | mRNA | Sus scrofa | | | 55S mammalian mitochondrial ribosome with tRNA(P/P) and tRNA(E*) | Electron microscopy | 3.9 | 6 | 2021-06-02 |