Equivalence class NR_4.0_76490.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 9AZC|1|Pt (rep) | Transfer RNA | P site tRNA | Homo sapiens | Eukarya | RF00005 | In situ human 80S ribosome (Consensus map) | Electron microscopy | 2.19 | 74 | 2025-04-30 |
| 2 | 9B0O|1|Pt | Transfer RNA | P site tRNA | Homo sapiens | Eukarya | RF00005 | In situ human Post-eEF1A-A/T-P-Z state 80S ribosome | Electron microscopy | 2.83 | 76 | 2025-04-30 |
| 3 | 9AZS|1|Pt | Transfer RNA | P site tRNA | Homo sapiens | Eukarya | RF00005 | In situ human Post-eEF1A-AT-P-E state 80S ribosome | Electron microscopy | 2.8 | 74 | 2025-04-30 |
| 4 | 9B0N|1|Pt | Transfer RNA | P site tRNA | Homo sapiens | Eukarya | RF00005 | In situ human Post-eEF1A-AT-P state 80S ribosome | Electron microscopy | 2.92 | 76 | 2025-04-30 |
| 5 | 9B0W|1|AP | Transfer RNA | A/P site tRNA | Homo sapiens | Eukarya | RF00005 | In situ human eEF2-A/P-P/E state 80S ribosome | Electron microscopy | 2.66 | 71 | 2025-04-30 |
| 6 | 9AZN|1|AP | Transfer RNA | A/P site tRNA | Homo sapiens | Eukarya | RF00005 | In situ human A/P-P/E state 80S ribosome | Electron microscopy | 2.98 | 71 | 2025-04-30 |
| 7 | 8UIY|1|Pt | Transfer RNA | P site tRNA | Homo sapiens | Eukarya | RF00005 | In situ human P-Z state 80S ribosome | Electron microscopy | 3.44 | 76 | 2025-04-09 |
| 8 | 9B0Q|1|AP | Transfer RNA | A/P site tRNA [Homo sapiens] | Homo sapiens | Eukarya | RF00005 | In situ human top-back di-ribosome structure (Composite map) | Electron microscopy | 3.2 | 71 | 2025-03-19 |
| 9 | 9B0Q|1|aP | Transfer RNA | A/P site tRNA [Homo sapiens] | Homo sapiens | Eukarya | RF00005 | In situ human top-back di-ribosome structure (Composite map) | Electron microscopy | 3.2 | 71 | 2025-03-19 |
| 10 | 8UIZ|1|Pt | Transfer RNA | P site tRNA | Homo sapiens | Eukarya | RF00005 | In situ human P-E state 80S ribosome | Electron microscopy | 3.43 | 74 | 2025-04-09 |
| 11 | 8UJK|1|Pt | Transfer RNA | P site tRNA | Homo sapiens | Eukarya | RF00005 | In situ HHT and CHX treated A-P-Z state 80S ribosome | Electron microscopy | 3.54 | 76 | 2025-04-16 |
| 12 | 8UJJ|1|Pt | Transfer RNA | P site tRNA | Homo sapiens | Eukarya | RF00005 | In situ HHT and CHX treated A-P state 80S ribosome | Electron microscopy | 3.56 | 76 | 2025-04-16 |
| 13 | 8UJ9|1|Pt | Transfer RNA | P site tRNA [Homo sapiens] | Homo sapiens | Eukarya | RF00005 | In situ human P state 80S ribosome | Electron microscopy | 3.64 | 76 | 2025-04-16 |
| 14 | 8UJK|1|At | Transfer RNA | A site tRNA | Homo sapiens | Eukarya | RF00005 | In situ HHT and CHX treated A-P-Z state 80S ribosome | Electron microscopy | 3.54 | 71 | 2025-04-16 |
| 15 | 8UJJ|1|At | Transfer RNA | A site tRNA | Homo sapiens | Eukarya | RF00005 | In situ HHT and CHX treated A-P state 80S ribosome | Electron microscopy | 3.56 | 71 | 2025-04-16 |
| 16 | 9B0S|1|Pt | Transfer RNA | P site tRNA | Homo sapiens | Eukarya | RF00005 | In situ human top-top di-ribosome structure (Composite map) | Electron microscopy | 3.8 | 74 | 2025-03-19 |
| 17 | 9B0S|1|aP | Transfer RNA | A/P site tRNA [Homo sapiens] | Homo sapiens | Eukarya | RF00005 | In situ human top-top di-ribosome structure (Composite map) | Electron microscopy | 3.8 | 71 | 2025-03-19 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 9AZN|1|AP | In situ human A/P-P/E state 80S ribosome | ELECTRON MICROSCOPY | 2.98 | 71 | |
| 2 | 9B0W|1|AP | In situ human eEF2-A/P-P/E state 80S ribosome | ELECTRON MICROSCOPY | 2.66 | 71 | |
| 3 | 9B0Q|1|AP | In situ human top-back di-ribosome structure (Composite map) | ELECTRON MICROSCOPY | 3.2 | 71 | |
| 4 | 9B0S|1|aP | In situ human top-top di-ribosome structure (Composite map) | ELECTRON MICROSCOPY | 3.8 | 71 | |
| 5 | 9B0Q|1|aP | In situ human top-back di-ribosome structure (Composite map) | ELECTRON MICROSCOPY | 3.2 | 71 | |
| 6 | 8UJJ|1|At | In situ HHT and CHX treated A-P state 80S ribosome | ELECTRON MICROSCOPY | 3.56 | 71 | |
| 7 | 8UJK|1|At | In situ HHT and CHX treated A-P-Z state 80S ribosome | ELECTRON MICROSCOPY | 3.54 | 71 | |
| 8 | 9B0S|1|Pt | In situ human top-top di-ribosome structure (Composite map) | ELECTRON MICROSCOPY | 3.8 | 74 | |
| 9 | 9B0O|1|Pt | In situ human Post-eEF1A-A/T-P-Z state 80S ribosome | ELECTRON MICROSCOPY | 2.83 | 76 | |
| 10 | 9B0N|1|Pt | In situ human Post-eEF1A-AT-P state 80S ribosome | ELECTRON MICROSCOPY | 2.92 | 76 | |
| 11 | 8UJ9|1|Pt | In situ human P state 80S ribosome | ELECTRON MICROSCOPY | 3.64 | 76 | |
| 12 | 8UIY|1|Pt | In situ human P-Z state 80S ribosome | ELECTRON MICROSCOPY | 3.44 | 76 | |
| 13 | 9AZS|1|Pt | In situ human Post-eEF1A-AT-P-E state 80S ribosome | ELECTRON MICROSCOPY | 2.8 | 74 | |
| 14 | 8UIZ|1|Pt | In situ human P-E state 80S ribosome | ELECTRON MICROSCOPY | 3.43 | 74 | |
| 15 | 9AZC|1|Pt | In situ human 80S ribosome (Consensus map) | ELECTRON MICROSCOPY | 2.19 | 74 | |
| 16 | 8UJK|1|Pt | In situ HHT and CHX treated A-P-Z state 80S ribosome | ELECTRON MICROSCOPY | 3.54 | 76 | |
| 17 | 8UJJ|1|Pt | In situ HHT and CHX treated A-P state 80S ribosome | ELECTRON MICROSCOPY | 3.56 | 76 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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