Equivalence class NR_4.0_82475.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8YUO|1|V (rep) | Transfer RNA | A-site tRNAIle2 | Pseudomonas putida NBRC 14164 | Bacteria | RF00005 | E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-site | Electron microscopy | 2.25 | 2024-11-06 |
| 2 | 8YUO|1|X | Transfer RNA | A-site tRNAIle2 | Pseudomonas putida NBRC 14164 | Bacteria | RF00005 | E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-site | Electron microscopy | 2.25 | 2024-11-06 |
| 3 | 8YUP|1|X | Transfer RNA | A-site tRNAIle2 | Pseudomonas putida NBRC 14164 | Bacteria | RF00005 | E. coli 70S ribosome complexed with P. putida tRNAIle2 and A4 mRNA | Electron microscopy | 2.39 | 2024-11-06 |
| 4 | 8YUQ|1|X | Transfer RNA | A-site tRNAIle2 | Pseudomonas putida NBRC 14164 | Bacteria | RF00005 | E. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNA | Electron microscopy | 2.41 | 2024-11-06 |
| 5 | 8YUS|1|X | Transfer RNA | A-site tRNAIle2 | Pseudomonas putida NBRC 14164 | Bacteria | RF00005 | E. coli 70S ribosome complexed with P.putida tRNAIle2 and A(F)4 mRNA | Electron microscopy | 2.43 | 2024-11-06 |
| 6 | 8YUR|1|X | Transfer RNA | A-site tRNAIle2 | Pseudomonas putida NBRC 14164 | Bacteria | RF00005 | E. coli 70S ribosome complexed with P. putida tRNAIle2 and Am4 mRNA | Electron microscopy | 2.47 | 2024-11-06 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 8YUP|1|X | E. coli 70S ribosome complexed with P. putida tRNAIle2 and A4 mRNA | ELECTRON MICROSCOPY | 2.39 | 77 | |
| 2 | 8YUO|1|X | E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-site | ELECTRON MICROSCOPY | 2.25 | 77 | |
| 3 | 8YUQ|1|X | E. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNA | ELECTRON MICROSCOPY | 2.41 | 77 | |
| 4 | 8YUS|1|X | E. coli 70S ribosome complexed with P.putida tRNAIle2 and A(F)4 mRNA | ELECTRON MICROSCOPY | 2.43 | 77 | |
| 5 | 8YUR|1|X | E. coli 70S ribosome complexed with P. putida tRNAIle2 and Am4 mRNA | ELECTRON MICROSCOPY | 2.47 | 77 | |
| 6 | 8YUO|1|V | E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-site | ELECTRON MICROSCOPY | 2.25 | 77 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: