Equivalence class NR_4.0_82829.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8VY1|1|A (rep) | Chains: A,B,C | synthetic construct | Mango II bound to 365A-088 | X-ray diffraction | 3.1 | 2025-02-19 | |||
| 2 | 8VY1|1|B | Chains: A,B,C | synthetic construct | Mango II bound to 365A-088 | X-ray diffraction | 3.1 | 2025-02-19 | |||
| 3 | 6C63|1|A | RNA (36-MER) | synthetic construct | Crystal Structure of the Mango-II Fluorescent Aptamer Bound to TO1-Biotin | X-ray diffraction | 2.9 | 2018-08-08 | |||
| 4 | 8U5P|1|B | Mango II | synthetic construct | Structure of Mango II aptamer bound to T01-6A-B | X-ray diffraction | 2.9 | 2024-03-27 | |||
| 5 | 6C63|1|B | RNA (36-MER) | synthetic construct | Crystal Structure of the Mango-II Fluorescent Aptamer Bound to TO1-Biotin | X-ray diffraction | 2.9 | 2018-08-08 | |||
| 6 | 8U5P|1|A | Mango II | synthetic construct | Structure of Mango II aptamer bound to T01-6A-B | X-ray diffraction | 2.9 | 2024-03-27 | |||
| 7 | 6C65|1|A | RNA (36-MER) | synthetic construct | Crystal Structure of the Mango-II-A22U Fluorescent Aptamer Bound to TO1-Biotin | X-ray diffraction | 2.8 | 2018-08-08 | |||
| 8 | 8VXZ|1|A | Chains: A,B,C | synthetic construct | Mango II bound to 365A-084 | X-ray diffraction | 3 | 2025-02-19 | |||
| 9 | 8VXZ|1|B | Chains: A,B,C | synthetic construct | Mango II bound to 365A-084 | X-ray diffraction | 3 | 2025-02-19 | |||
| 10 | 8U5K|1|A | Mango II | synthetic construct | Structure of Mango II aptamer bound to T01-6A | X-ray diffraction | 2.8 | 2024-03-27 | |||
| 11 | 8VY1|1|C | Chains: A,B,C | synthetic construct | Mango II bound to 365A-088 | X-ray diffraction | 3.1 | 2025-02-19 | |||
| 12 | 6C65|1|B | RNA (36-MER) | synthetic construct | Crystal Structure of the Mango-II-A22U Fluorescent Aptamer Bound to TO1-Biotin | X-ray diffraction | 2.8 | 2018-08-08 | |||
| 13 | 8U5K|1|B | Mango II | synthetic construct | Structure of Mango II aptamer bound to T01-6A | X-ray diffraction | 2.8 | 2024-03-27 | |||
| 14 | 6C64|1|A | RNA (36-MER) | synthetic construct | Crystal Structure of the Mango-II Fluorescent Aptamer Bound to TO3-Biotin | X-ray diffraction | 3 | 2018-08-08 | |||
| 15 | 8VY0|1|A | Chains: A,B,C | synthetic construct | Mango II bound to 365A-087 | X-ray diffraction | 3.1 | 2025-02-19 | |||
| 16 | 8U5K|1|C | Mango II | synthetic construct | Structure of Mango II aptamer bound to T01-6A | X-ray diffraction | 2.8 | 2024-03-27 | |||
| 17 | 6C64|1|B | RNA (36-MER) | synthetic construct | Crystal Structure of the Mango-II Fluorescent Aptamer Bound to TO3-Biotin | X-ray diffraction | 3 | 2018-08-08 | |||
| 18 | 8VY0|1|B | Chains: A,B,C | synthetic construct | Mango II bound to 365A-087 | X-ray diffraction | 3.1 | 2025-02-19 | |||
| 19 | 8VXX|1|A | Chains: A,B,C | synthetic construct | Mango II bound to 365A-061 | X-ray diffraction | 3.1 | 2025-02-19 | |||
| 20 | 8U5P|1|C | Mango II | synthetic construct | Structure of Mango II aptamer bound to T01-6A-B | X-ray diffraction | 2.9 | 2024-03-27 | |||
| 21 | 8VXZ|1|C | Chains: A,B,C | synthetic construct | Mango II bound to 365A-084 | X-ray diffraction | 3 | 2025-02-19 | |||
| 22 | 8VXX|1|B | Chains: A,B,C | synthetic construct | Mango II bound to 365A-061 | X-ray diffraction | 3.1 | 2025-02-19 | |||
| 23 | 6C63|1|C | RNA (32-MER) | synthetic construct | Crystal Structure of the Mango-II Fluorescent Aptamer Bound to TO1-Biotin | X-ray diffraction | 2.9 | 2018-08-08 | |||
| 24 | 6C65|1|C | RNA (35-MER) | synthetic construct | Crystal Structure of the Mango-II-A22U Fluorescent Aptamer Bound to TO1-Biotin | X-ray diffraction | 2.8 | 2018-08-08 | |||
| 25 | 8VY0|1|C | Chains: A,B,C | synthetic construct | Mango II bound to 365A-087 | X-ray diffraction | 3.1 | 2025-02-19 | |||
| 26 | 8VXX|1|C | Chains: A,B,C | synthetic construct | Mango II bound to 365A-061 | X-ray diffraction | 3.1 | 2025-02-19 | |||
| 27 | 6C64|1|D | RNA (32-MER) | synthetic construct | Crystal Structure of the Mango-II Fluorescent Aptamer Bound to TO3-Biotin | X-ray diffraction | 3 | 2018-08-08 | |||
| 28 | 8U60|1|A | RNA Mango II variant 2 aptamer | synthetic construct | Structure of Mango II variant2 aptamer bound to T01-6A | X-ray diffraction | 3.3 | 2024-03-27 | |||
| 29 | 8U60|1|B | RNA Mango II variant 2 aptamer | synthetic construct | Structure of Mango II variant2 aptamer bound to T01-6A | X-ray diffraction | 3.3 | 2024-03-27 | |||
| 30 | 8U60|1|C | RNA Mango II variant 2 aptamer | synthetic construct | Structure of Mango II variant2 aptamer bound to T01-6A | X-ray diffraction | 3.3 | 2024-03-27 |
Release history
| Release | 3.375 |
|---|---|
| Date | 2025-02-19 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 6C63|1|C | Crystal Structure of the Mango-II Fluorescent Aptamer Bound to TO1-Biotin | X-RAY DIFFRACTION | 2.9 | 32 | |
| 2 | 6C64|1|D | Crystal Structure of the Mango-II Fluorescent Aptamer Bound to TO3-Biotin | X-RAY DIFFRACTION | 3 | 32 | |
| 3 | 6C64|1|A | Crystal Structure of the Mango-II Fluorescent Aptamer Bound to TO3-Biotin | X-RAY DIFFRACTION | 3 | 36 | |
| 4 | 6C65|1|A | Crystal Structure of the Mango-II-A22U Fluorescent Aptamer Bound to TO1-Biotin | X-RAY DIFFRACTION | 2.8 | 36 | |
| 5 | 6C63|1|A | Crystal Structure of the Mango-II Fluorescent Aptamer Bound to TO1-Biotin | X-RAY DIFFRACTION | 2.9 | 36 | |
| 6 | 8U5P|1|A | Structure of Mango II aptamer bound to T01-6A-B | X-RAY DIFFRACTION | 2.9 | 36 | |
| 7 | 8VXZ|1|A | Mango II bound to 365A-084 | X-RAY DIFFRACTION | 3 | 36 | |
| 8 | 8VY1|1|A | Mango II bound to 365A-088 | X-RAY DIFFRACTION | 3.1 | 36 | |
| 9 | 8VY0|1|A | Mango II bound to 365A-087 | X-RAY DIFFRACTION | 3.1 | 36 | |
| 10 | 8U60|1|A | Structure of Mango II variant2 aptamer bound to T01-6A | X-RAY DIFFRACTION | 3.3 | 36 | |
| 11 | 8U5K|1|A | Structure of Mango II aptamer bound to T01-6A | X-RAY DIFFRACTION | 2.8 | 36 | |
| 12 | 8VXX|1|A | Mango II bound to 365A-061 | X-RAY DIFFRACTION | 3.1 | 36 | |
| 13 | 8U60|1|B | Structure of Mango II variant2 aptamer bound to T01-6A | X-RAY DIFFRACTION | 3.3 | 36 | |
| 14 | 8U5K|1|B | Structure of Mango II aptamer bound to T01-6A | X-RAY DIFFRACTION | 2.8 | 36 | |
| 15 | 8VXX|1|B | Mango II bound to 365A-061 | X-RAY DIFFRACTION | 3.1 | 36 | |
| 16 | 8VY0|1|B | Mango II bound to 365A-087 | X-RAY DIFFRACTION | 3.1 | 36 | |
| 17 | 8VXZ|1|B | Mango II bound to 365A-084 | X-RAY DIFFRACTION | 3 | 36 | |
| 18 | 8VY1|1|B | Mango II bound to 365A-088 | X-RAY DIFFRACTION | 3.1 | 36 | |
| 19 | 8U5P|1|B | Structure of Mango II aptamer bound to T01-6A-B | X-RAY DIFFRACTION | 2.9 | 36 | |
| 20 | 6C63|1|B | Crystal Structure of the Mango-II Fluorescent Aptamer Bound to TO1-Biotin | X-RAY DIFFRACTION | 2.9 | 36 | |
| 21 | 6C65|1|B | Crystal Structure of the Mango-II-A22U Fluorescent Aptamer Bound to TO1-Biotin | X-RAY DIFFRACTION | 2.8 | 36 | |
| 22 | 6C64|1|B | Crystal Structure of the Mango-II Fluorescent Aptamer Bound to TO3-Biotin | X-RAY DIFFRACTION | 3 | 36 | |
| 23 | 8VY0|1|C | Mango II bound to 365A-087 | X-RAY DIFFRACTION | 3.1 | 36 | |
| 24 | 8VXZ|1|C | Mango II bound to 365A-084 | X-RAY DIFFRACTION | 3 | 36 | |
| 25 | 8U5K|1|C | Structure of Mango II aptamer bound to T01-6A | X-RAY DIFFRACTION | 2.8 | 36 | |
| 26 | 8VXX|1|C | Mango II bound to 365A-061 | X-RAY DIFFRACTION | 3.1 | 36 | |
| 27 | 8U5P|1|C | Structure of Mango II aptamer bound to T01-6A-B | X-RAY DIFFRACTION | 2.9 | 35 | |
| 28 | 8VY1|1|C | Mango II bound to 365A-088 | X-RAY DIFFRACTION | 3.1 | 36 | |
| 29 | 8U60|1|C | Structure of Mango II variant2 aptamer bound to T01-6A | X-RAY DIFFRACTION | 3.3 | 37 | |
| 30 | 6C65|1|C | Crystal Structure of the Mango-II-A22U Fluorescent Aptamer Bound to TO1-Biotin | X-RAY DIFFRACTION | 2.8 | 35 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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