NR_4.0_83717.34

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	5J7L\|1\|DA (rep)	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	2016-07-27
2	5J8A\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-ray diffraction	3.1	2016-07-06
3	5JC9\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-ray diffraction	3.03	2016-07-06
4	4YBB\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	2015-03-18
5	5IT8\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	3.12	2016-07-27
6	4WOI\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	2015-08-05
7	4WOI\|1\|CA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	2015-08-05
8	5J91\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	2016-07-06
9	4V9P\|1\|EA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
10	5J88\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-ray diffraction	3.32	2016-07-06
11	4V9P\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
12	4V9P\|1\|GA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
13	4V9P\|1\|AA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
14	4V9D\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2014-07-09
15	4V9O\|1\|AA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
16	4V9O\|1\|EA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
17	4WWW\|1\|RA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to CEM-101	X-ray diffraction	3.1	2014-12-24
18	4V9O\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
19	4V6C\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.19	2014-07-09
20	5J7L\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	2016-07-27
21	4U27\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	2014-07-30
22	4V7T\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-ray diffraction	3.19	2014-07-09
23	4WF1\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to negamycin.	X-ray diffraction	3.09	2014-11-05
24	5J8A\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-ray diffraction	3.1	2016-07-06
25	5JC9\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-ray diffraction	3.03	2016-07-06
26	4V7U\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to erythromycin.	X-ray diffraction	3.1	2014-07-09
27	4V7V\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to clindamycin.	X-ray diffraction	3.29	2014-07-09
28	4V52\|1\|DB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-ray diffraction	3.21	2014-07-09
29	4U24\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	2014-07-30
30	4U25\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	2014-07-30
31	4V9D\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2014-07-09
32	4U26\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	2014-07-30
33	4V7S\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to telithromycin.	X-ray diffraction	3.25	2014-07-09
34	4V57\|1\|DB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-ray diffraction	3.5	2014-07-09
35	4V52\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-ray diffraction	3.21	2014-07-09
36	4V57\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-ray diffraction	3.5	2014-07-09
37	4V9O\|1\|GA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
38	4U1U\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	2014-07-30
39	4V85\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	X-ray diffraction	3.2	2014-07-09
40	4V54\|1\|DB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-ray diffraction	3.3	2014-07-09
41	4V64\|1\|DB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-ray diffraction	3.5	2014-07-09
42	4V50\|1\|DB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-ray diffraction	3.22	2014-07-09
43	4V54\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-ray diffraction	3.3	2014-07-09
44	4V64\|1\|BB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-ray diffraction	3.5	2014-07-09
45	4V53\|1\|DB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-ray diffraction	3.54	2014-07-09
46	4V50\|1\|BB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-ray diffraction	3.22	2014-07-09
47	4U1V\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	2014-07-30
48	4YBB\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	2015-03-18
49	5J88\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-ray diffraction	3.32	2016-07-06
50	4V9C\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	2014-07-09
51	4V53\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-ray diffraction	3.54	2014-07-09
52	4V56\|1\|DB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-ray diffraction	3.93	2014-07-09
53	4U20\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	2014-07-30
54	4V56\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-ray diffraction	3.93	2014-07-09
55	4U27\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	2014-07-30
56	4V55\|1\|DB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-ray diffraction	4	2014-07-09
57	4V4Q\|1\|DB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-ray diffraction	3.46	2014-07-09
58	4V55\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-ray diffraction	4	2014-07-09
59	4V4Q\|1\|BB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-ray diffraction	3.46	2014-07-09
60	4V6D\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.81	2014-07-09
61	4U25\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	2014-07-30
62	4U1U\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	2014-07-30
63	4V9C\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	2014-07-09
64	4U1V\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	2014-07-30
65	4V89\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)	X-ray diffraction	3.7	2014-07-09
66	5IT8\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	3.12	2016-07-27
67	4V6E\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.71	2014-07-09
68	4WF1\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to negamycin.	X-ray diffraction	3.09	2014-11-05
69	4U24\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	2014-07-30
70	4U26\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	2014-07-30
71	4U20\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	2014-07-30
72	5J91\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	2016-07-06
73	4V6C\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.19	2014-07-09
74	4WWW\|1\|YA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to CEM-101	X-ray diffraction	3.1	2014-12-24
75	4V7T\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-ray diffraction	3.19	2014-07-09
76	4V6D\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.81	2014-07-09
77	4V7V\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to clindamycin.	X-ray diffraction	3.29	2014-07-09
78	4V7S\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to telithromycin.	X-ray diffraction	3.25	2014-07-09
79	4V7U\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to erythromycin.	X-ray diffraction	3.1	2014-07-09
80	4V6E\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.71	2014-07-09
81	4V5B\|1\|CB	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF02541	Structure of PDF binding helix in complex with the ribosome	X-ray diffraction	3.74	2014-07-09
82	4V5B\|1\|AB	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF02541	Structure of PDF binding helix in complex with the ribosome	X-ray diffraction	3.74	2014-07-09
83	5J5B\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	2016-07-27
84	4V4H\|1\|DB	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-ray diffraction	3.46	2014-07-09
85	4V4H\|1\|BB	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-ray diffraction	3.46	2014-07-09
86	5J5B\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	2016-07-27
87	5AFI\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	2015-03-11
88	5NWY\|1\|N	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	Electron microscopy	2.9	2017-07-19
89	5H5U\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Mechanistic insights into the alternative translation termination by ArfA and RF2	Electron microscopy	3.01	2017-01-25
90	5MDV\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	Electron microscopy	2.97	2016-12-14
91	5MDW\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)	Electron microscopy	3.06	2016-12-14
92	5MGP\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs	Electron microscopy	3.1	2016-12-14
93	5U9G\|1\|01	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)	Electron microscopy	3.2	2017-03-22
94	5U9F\|1\|01	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)	Electron microscopy	3.2	2017-03-22
95	5MDZ\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of the 70S ribosome (empty A site)	Electron microscopy	3.1	2016-12-14
96	5UYM\|1\|01	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)	Electron microscopy	3.2	2017-06-07
97	6ENU\|1\|A	Large subunit ribosomal RNA	23S Ribosomal RNA	Escherichia coli	Bacteria	RF02541	Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)	Electron microscopy	3.1	2017-11-22
98	3JBV\|1\|b	Large subunit ribosomal RNA	RNA (2903-MER)	Escherichia coli	Bacteria	RF02541	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	Electron microscopy	3.32	2016-01-27
99	5WE4\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	70S ribosome-EF-Tu wt complex with GppNHp	Electron microscopy	3.1	2018-04-25
100	6C4I\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Conformation of methylated GGQ in the peptidyl transferase center during translation termination	Electron microscopy	3.24	2018-02-21
101	4V80\|1\|BA		23S rRNA				Crystal structure of the E. coli ribosome bound to CEM-101.	X-ray diffraction	3.3	2014-07-09
102	4V80\|1\|DA		23S rRNA				Crystal structure of the E. coli ribosome bound to CEM-101.	X-ray diffraction	3.3	2014-07-09
103	5WDT\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	70S ribosome-EF-Tu H84A complex with GppNHp	Electron microscopy	3	2018-04-25
104	6ENF\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P	Electron microscopy	3.2	2017-11-22
105	5GAE\|1\|A	Large subunit ribosomal RNA	23S rRNA, tRNA CCA end (5'-R(PCPCP*A)-3')	Escherichia coli	Bacteria	RF02541	RNC in complex with a translocating SecYEG	Electron microscopy	3.33	2016-01-27
106	3JCE\|1\|A	Large subunit ribosomal RNA	23 ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	Electron microscopy	3.2	2016-01-13
107	5MDY\|1\|1	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)	Electron microscopy	3.35	2016-12-21
108	5LZD\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)	Electron microscopy	3.4	2016-11-23
109	5WE6\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA	Electron microscopy	3.4	2018-04-25
110	6BU8\|1\|01	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S ribosome with S1 domains 1 and 2 (Class 1)	Electron microscopy	3.5	2018-01-31
111	5O2R\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosome	Electron microscopy	3.4	2017-07-26
112	5LZE\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)	Electron microscopy	3.5	2016-11-23
113	5U4I\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	Electron microscopy	3.5	2017-01-11
114	5UYL\|1\|01	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)	Electron microscopy	3.6	2017-06-14
115	5IQR\|1\|1	Large subunit ribosomal RNA	LSU rRNA	Escherichia coli	Bacteria	RF02541	Structure of RelA bound to the 70S ribosome	Electron microscopy	3	2016-05-04
116	3JBU\|1\|b	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	Electron microscopy	3.64	2016-01-27
117	5LZA\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)	Electron microscopy	3.6	2016-11-23
118	5KCR\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolution	Electron microscopy	3.6	2016-08-17
119	5JU8\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA	Electron microscopy	3.6	2016-07-20
120	5JTE\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA	Electron microscopy	3.6	2016-07-20
121	3J9Z\|1\|LA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G	Electron microscopy	3.6	2015-07-01
122	3JCJ\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association	Electron microscopy	3.7	2016-03-09
123	5UYQ\|1\|01	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)	Electron microscopy	3.8	2017-06-07
124	6ENJ\|1\|A	Large subunit ribosomal RNA	23S Ribosomal RNA	Escherichia coli	Bacteria	RF02541	Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)	Electron microscopy	3.7	2017-11-22
125	5L3P\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex	Electron microscopy	3.7	2016-07-20
126	5GAD\|1\|A	Large subunit ribosomal RNA	23S rRNA, tRNA CCAend	Escherichia coli	Bacteria	RF02541	RNC-SRP-SR complex early state	Electron microscopy	3.7	2016-01-27
127	5UYP\|1\|01	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)	Electron microscopy	3.9	2017-06-07
128	5UYK\|1\|01	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)	Electron microscopy	3.9	2017-06-07
129	5KPW\|1\|27	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)	Electron microscopy	3.9	2016-09-28
130	5GAG\|1\|A	Large subunit ribosomal RNA	23S rRNA, tRNA CCAend	Escherichia coli	Bacteria	RF02541	RNC in complex with SRP-SR in the closed state	Electron microscopy	3.8	2016-01-27
131	5GAH\|1\|A	Large subunit ribosomal RNA	23S rRNA, tRNA CCAend	Escherichia coli	Bacteria	RF02541	RNC in complex with SRP with detached NG domain	Electron microscopy	3.8	2016-01-27
132	5KPS\|1\|28	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)	Electron microscopy	3.9	2016-09-28
133	5UYN\|1\|01	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)	Electron microscopy	4	2017-06-07
134	3J9Y\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome	Electron microscopy	3.9	2015-04-15
135	5KPX\|1\|27	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)	Electron microscopy	3.9	2016-09-28
136	3JCD\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)	Electron microscopy	3.7	2016-01-13
137	4UY8\|1\|A	Large subunit ribosomal RNA	RRNA-23S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF02541	Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome	Electron microscopy	3.8	2014-10-29
138	5KCS\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution	Electron microscopy	3.9	2016-08-17
139	3J7Z\|1\|A	Large subunit ribosomal RNA	23S rRNA, P-tRNA CCA-end	Escherichia coli	Bacteria	RF02541	Structure of the E. coli 50S subunit with ErmCL nascent chain	Electron microscopy	3.9	2014-10-22
140	5NP6\|1\|Y	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S structure prior to bypassing	Electron microscopy	3.6	2017-06-14
141	3JA1\|1\|LA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G	Electron microscopy	3.6	2015-07-01
142	6C4H\|1\|A	Large subunit ribosomal RNA	23S rRNA, P-site tRNA fMet	Escherichia coli	Bacteria	RF02541	Conformation of methylated GGQ in the peptidyl transferase center during translation termination (PTC region)	Electron microscopy	3.1	2018-02-21
143	5U4J\|1\|A	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	Electron microscopy	3.7	2017-01-11

Release history

Release	3.19
Date	2018-04-27

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_4.0_83717.34	NR_4.0_83717.33	3.19	(140) 3J7Z\|1\|A, 3J9Y\|1\|A, 3J9Z\|1\|LA, 3JA1\|1\|LA, 3JBU\|1\|b, 3JBV\|1\|b, 3JCD\|1\|A, 3JCE\|1\|A, 3JCJ\|1\|A, 4U1U\|1\|BA, 4U1U\|1\|DA, 4U1V\|1\|BA, 4U1V\|1\|DA, 4U20\|1\|BA, 4U20\|1\|DA, 4U24\|1\|BA, 4U24\|1\|DA, 4U25\|1\|BA, 4U25\|1\|DA, 4U26\|1\|BA, 4U26\|1\|DA, 4U27\|1\|BA, 4U27\|1\|DA, 4UY8\|1\|A, 4V4H\|1\|BB, 4V4H\|1\|DB, 4V4Q\|1\|BB, 4V4Q\|1\|DB, 4V50\|1\|BB, 4V50\|1\|DB, 4V52\|1\|BB, 4V52\|1\|DB, 4V53\|1\|BB, 4V53\|1\|DB, 4V54\|1\|BB, 4V54\|1\|DB, 4V55\|1\|BB, 4V55\|1\|DB, 4V56\|1\|BB, 4V56\|1\|DB, 4V57\|1\|BB, 4V57\|1\|DB, 4V5B\|1\|AB, 4V5B\|1\|CB, 4V64\|1\|BB, 4V64\|1\|DB, 4V6C\|1\|BA, 4V6C\|1\|DA, 4V6D\|1\|BA, 4V6D\|1\|DA, 4V6E\|1\|BA, 4V6E\|1\|DA, 4V7S\|1\|BA, 4V7S\|1\|DA, 4V7T\|1\|BA, 4V7T\|1\|DA, 4V7U\|1\|BA, 4V7U\|1\|DA, 4V7V\|1\|BA, 4V7V\|1\|DA, 4V80\|1\|BA, 4V80\|1\|DA, 4V85\|1\|BA, 4V89\|1\|BA, 4V9C\|1\|BA, 4V9C\|1\|DA, 4V9D\|1\|CA, 4V9D\|1\|DA, 4V9O\|1\|AA, 4V9O\|1\|CA, 4V9O\|1\|EA, 4V9O\|1\|GA, 4V9P\|1\|AA, 4V9P\|1\|CA, 4V9P\|1\|EA, 4V9P\|1\|GA, 4WF1\|1\|BA, 4WF1\|1\|DA, 4WOI\|1\|BA, 4WOI\|1\|CA, 4WWW\|1\|RA, 4WWW\|1\|YA, 4YBB\|1\|CA, 4YBB\|1\|DA, 5AFI\|1\|A, 5GAD\|1\|A, 5GAE\|1\|A, 5GAG\|1\|A, 5GAH\|1\|A, 5H5U\|1\|A, 5IQR\|1\|1, 5IT8\|1\|CA, 5IT8\|1\|DA, 5J5B\|1\|CA, 5J5B\|1\|DA, 5J7L\|1\|CA, 5J7L\|1\|DA, 5J88\|1\|CA, 5J88\|1\|DA, 5J8A\|1\|CA, 5J8A\|1\|DA, 5J91\|1\|CA, 5J91\|1\|DA, 5JC9\|1\|CA, 5JC9\|1\|DA, 5JTE\|1\|BA, 5JU8\|1\|BA, 5KCR\|1\|1A, 5KCS\|1\|1A, 5KPS\|1\|28, 5KPW\|1\|27, 5KPX\|1\|27, 5L3P\|1\|A, 5LZA\|1\|A, 5LZD\|1\|A, 5LZE\|1\|A, 5MDV\|1\|1, 5MDW\|1\|1, 5MDY\|1\|1, 5MDZ\|1\|1, 5MGP\|1\|A, 5NP6\|1\|Y, 5NWY\|1\|N, 5O2R\|1\|A, 5U4I\|1\|A, 5U4J\|1\|A, 5U9F\|1\|01, 5U9G\|1\|01, 5UYK\|1\|01, 5UYL\|1\|01, 5UYM\|1\|01, 5UYN\|1\|01, 5UYP\|1\|01, 5UYQ\|1\|01, 6BU8\|1\|01, 6C4H\|1\|A, 6C4I\|1\|A, 6ENF\|1\|A, 6ENJ\|1\|A, 6ENU\|1\|A	(3) 5WDT\|1\|A, 5WE4\|1\|A, 5WE6\|1\|A	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_4.0_83717.34	NR_4.0_83717.35	3.20	(143) 3J7Z\|1\|A, 3J9Y\|1\|A, 3J9Z\|1\|LA, 3JA1\|1\|LA, 3JBU\|1\|b, 3JBV\|1\|b, 3JCD\|1\|A, 3JCE\|1\|A, 3JCJ\|1\|A, 4U1U\|1\|BA, 4U1U\|1\|DA, 4U1V\|1\|BA, 4U1V\|1\|DA, 4U20\|1\|BA, 4U20\|1\|DA, 4U24\|1\|BA, 4U24\|1\|DA, 4U25\|1\|BA, 4U25\|1\|DA, 4U26\|1\|BA, 4U26\|1\|DA, 4U27\|1\|BA, 4U27\|1\|DA, 4UY8\|1\|A, 4V4H\|1\|BB, 4V4H\|1\|DB, 4V4Q\|1\|BB, 4V4Q\|1\|DB, 4V50\|1\|BB, 4V50\|1\|DB, 4V52\|1\|BB, 4V52\|1\|DB, 4V53\|1\|BB, 4V53\|1\|DB, 4V54\|1\|BB, 4V54\|1\|DB, 4V55\|1\|BB, 4V55\|1\|DB, 4V56\|1\|BB, 4V56\|1\|DB, 4V57\|1\|BB, 4V57\|1\|DB, 4V5B\|1\|AB, 4V5B\|1\|CB, 4V64\|1\|BB, 4V64\|1\|DB, 4V6C\|1\|BA, 4V6C\|1\|DA, 4V6D\|1\|BA, 4V6D\|1\|DA, 4V6E\|1\|BA, 4V6E\|1\|DA, 4V7S\|1\|BA, 4V7S\|1\|DA, 4V7T\|1\|BA, 4V7T\|1\|DA, 4V7U\|1\|BA, 4V7U\|1\|DA, 4V7V\|1\|BA, 4V7V\|1\|DA, 4V80\|1\|BA, 4V80\|1\|DA, 4V85\|1\|BA, 4V89\|1\|BA, 4V9C\|1\|BA, 4V9C\|1\|DA, 4V9D\|1\|CA, 4V9D\|1\|DA, 4V9O\|1\|AA, 4V9O\|1\|CA, 4V9O\|1\|EA, 4V9O\|1\|GA, 4V9P\|1\|AA, 4V9P\|1\|CA, 4V9P\|1\|EA, 4V9P\|1\|GA, 4WF1\|1\|BA, 4WF1\|1\|DA, 4WOI\|1\|BA, 4WOI\|1\|CA, 4WWW\|1\|RA, 4WWW\|1\|YA, 4YBB\|1\|CA, 4YBB\|1\|DA, 5AFI\|1\|A, 5GAD\|1\|A, 5GAE\|1\|A, 5GAG\|1\|A, 5GAH\|1\|A, 5H5U\|1\|A, 5IQR\|1\|1, 5IT8\|1\|CA, 5IT8\|1\|DA, 5J5B\|1\|CA, 5J5B\|1\|DA, 5J7L\|1\|CA, 5J7L\|1\|DA, 5J88\|1\|CA, 5J88\|1\|DA, 5J8A\|1\|CA, 5J8A\|1\|DA, 5J91\|1\|CA, 5J91\|1\|DA, 5JC9\|1\|CA, 5JC9\|1\|DA, 5JTE\|1\|BA, 5JU8\|1\|BA, 5KCR\|1\|1A, 5KCS\|1\|1A, 5KPS\|1\|28, 5KPW\|1\|27, 5KPX\|1\|27, 5L3P\|1\|A, 5LZA\|1\|A, 5LZD\|1\|A, 5LZE\|1\|A, 5MDV\|1\|1, 5MDW\|1\|1, 5MDY\|1\|1, 5MDZ\|1\|1, 5MGP\|1\|A, 5NP6\|1\|Y, 5NWY\|1\|N, 5O2R\|1\|A, 5U4I\|1\|A, 5U4J\|1\|A, 5U9F\|1\|01, 5U9G\|1\|01, 5UYK\|1\|01, 5UYL\|1\|01, 5UYM\|1\|01, 5UYN\|1\|01, 5UYP\|1\|01, 5UYQ\|1\|01, 5WDT\|1\|A, 5WE4\|1\|A, 5WE6\|1\|A, 6BU8\|1\|01, 6C4H\|1\|A, 6C4I\|1\|A, 6ENF\|1\|A, 6ENJ\|1\|A, 6ENU\|1\|A	(0)	(3) 5WF0\|1\|A, 5WFK\|1\|A, 5WFS\|1\|A

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	Length
1	3JBV\|1\|b	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	ELECTRON MICROSCOPY	3.32	2903
2	3JA1\|1\|LA	Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G	ELECTRON MICROSCOPY	3.6	2904
3	4U1U\|1\|BA	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	2897
4	4U20\|1\|BA	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	2897
5	4U1V\|1\|BA	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	2897
6	4WF1\|1\|BA	Crystal structure of the E. coli ribosome bound to negamycin.	X-RAY DIFFRACTION	3.09	2897
7	4U27\|1\|BA	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	2897
8	4U25\|1\|BA	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	2897
9	4U26\|1\|BA	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	2897
10	4U24\|1\|BA	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	2897
11	4V9D\|1\|CA	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	2897
12	4V9C\|1\|DA	Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	2897
13	4WOI\|1\|BA	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	2897
14	6ENJ\|1\|A	Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)	ELECTRON MICROSCOPY	3.7	2871
15	6ENU\|1\|A	Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)	ELECTRON MICROSCOPY	3.1	2871
16	6ENF\|1\|A	Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P	ELECTRON MICROSCOPY	3.2	2807
17	4V9O\|1\|AA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
18	4UY8\|1\|A	Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome	ELECTRON MICROSCOPY	3.8	2854
19	3J7Z\|1\|A	Structure of the E. coli 50S subunit with ErmCL nascent chain	ELECTRON MICROSCOPY	3.9	2854
20	4V9P\|1\|AA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
21	4V9P\|1\|CA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
22	4V9O\|1\|CA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
23	3JCJ\|1\|A	Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association	ELECTRON MICROSCOPY	3.7	2854
24	4V9P\|1\|EA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
25	4V9O\|1\|EA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
26	4V9O\|1\|GA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
27	4V9P\|1\|GA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
28	4V89\|1\|BA	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)	X-RAY DIFFRACTION	3.7	2853
29	4V85\|1\|BA	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	X-RAY DIFFRACTION	3.2	2853
30	4V5B\|1\|AB	Structure of PDF binding helix in complex with the ribosome	X-RAY DIFFRACTION	3.74	2841
31	4V54\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-RAY DIFFRACTION	3.3	2841
32	4V4Q\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-RAY DIFFRACTION	3.46	2841
33	4V4H\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-RAY DIFFRACTION	3.46	2841
34	4V55\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-RAY DIFFRACTION	4	2841
35	4V53\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-RAY DIFFRACTION	3.54	2841
36	4V52\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-RAY DIFFRACTION	3.21	2841
37	4V64\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-RAY DIFFRACTION	3.5	2841
38	4V57\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-RAY DIFFRACTION	3.5	2841
39	4V56\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-RAY DIFFRACTION	3.93	2841
40	4V50\|1\|BB	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-RAY DIFFRACTION	3.22	2841
41	4V6D\|1\|DA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.81	2841
42	4V6E\|1\|DA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.71	2841
43	4V6C\|1\|DA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.19	2841
44	4V7T\|1\|DA	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-RAY DIFFRACTION	3.19	2841
45	4V7V\|1\|DA	Crystal structure of the E. coli ribosome bound to clindamycin.	X-RAY DIFFRACTION	3.29	2841
46	4V7S\|1\|DA	Crystal structure of the E. coli ribosome bound to telithromycin.	X-RAY DIFFRACTION	3.25	2841
47	4V80\|1\|DA	Crystal structure of the E. coli ribosome bound to CEM-101.	X-RAY DIFFRACTION	3.3	2841
48	4WWW\|1\|YA	Crystal structure of the E. coli ribosome bound to CEM-101	X-RAY DIFFRACTION	3.1	2841
49	4V7U\|1\|DA	Crystal structure of the E. coli ribosome bound to erythromycin.	X-RAY DIFFRACTION	3.1	2841
50	5J88\|1\|CA	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-RAY DIFFRACTION	3.32	2876
51	5IT8\|1\|CA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	3.12	2876
52	5J91\|1\|CA	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	2876
53	5J5B\|1\|CA	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	2876
54	5J8A\|1\|CA	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-RAY DIFFRACTION	3.1	2876
55	5J7L\|1\|CA	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	2875
56	5JC9\|1\|CA	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-RAY DIFFRACTION	3.03	2876
57	4YBB\|1\|CA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	2876
58	4U24\|1\|DA	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	2897
59	4U26\|1\|DA	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	2897
60	4U25\|1\|DA	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	2897
61	4U27\|1\|DA	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	2897
62	4WF1\|1\|DA	Crystal structure of the E. coli ribosome bound to negamycin.	X-RAY DIFFRACTION	3.09	2897
63	4U1V\|1\|DA	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	2897
64	4U20\|1\|DA	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	2897
65	4U1U\|1\|DA	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	2897
66	4V9D\|1\|DA	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	2896
67	4V9C\|1\|BA	Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	2897
68	4WOI\|1\|CA	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	2897
69	4V7V\|1\|BA	Crystal structure of the E. coli ribosome bound to clindamycin.	X-RAY DIFFRACTION	3.29	2854
70	4V7T\|1\|BA	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-RAY DIFFRACTION	3.19	2854
71	4V7S\|1\|BA	Crystal structure of the E. coli ribosome bound to telithromycin.	X-RAY DIFFRACTION	3.25	2854
72	4WWW\|1\|RA	Crystal structure of the E. coli ribosome bound to CEM-101	X-RAY DIFFRACTION	3.1	2854
73	4V80\|1\|BA	Crystal structure of the E. coli ribosome bound to CEM-101.	X-RAY DIFFRACTION	3.3	2854
74	4V6C\|1\|BA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.19	2854
75	4V7U\|1\|BA	Crystal structure of the E. coli ribosome bound to erythromycin.	X-RAY DIFFRACTION	3.1	2854
76	4V6D\|1\|BA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.81	2854
77	4V6E\|1\|BA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.71	2854
78	5J88\|1\|DA	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-RAY DIFFRACTION	3.32	2886
79	5IT8\|1\|DA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	3.12	2886
80	5KCR\|1\|1A	Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolution	ELECTRON MICROSCOPY	3.6	2883
81	4YBB\|1\|DA	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	2883
82	5J5B\|1\|DA	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	2886
83	5J91\|1\|DA	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	2886
84	5J8A\|1\|DA	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-RAY DIFFRACTION	3.1	2886
85	5J7L\|1\|DA	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	2886
86	5JC9\|1\|DA	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-RAY DIFFRACTION	3.03	2886
87	4V5B\|1\|CB	Structure of PDF binding helix in complex with the ribosome	X-RAY DIFFRACTION	3.74	2841
88	4V55\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-RAY DIFFRACTION	4	2841
89	4V53\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-RAY DIFFRACTION	3.54	2841
90	4V52\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-RAY DIFFRACTION	3.21	2841
91	4V64\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-RAY DIFFRACTION	3.5	2841
92	4V54\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-RAY DIFFRACTION	3.3	2841
93	4V4H\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-RAY DIFFRACTION	3.46	2841
94	4V4Q\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-RAY DIFFRACTION	3.46	2841
95	4V57\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-RAY DIFFRACTION	3.5	2841
96	4V56\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-RAY DIFFRACTION	3.93	2841
97	4V50\|1\|DB	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-RAY DIFFRACTION	3.22	2841
98	3JBU\|1\|b	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	ELECTRON MICROSCOPY	3.64	2903
99	5GAE\|1\|A	RNC in complex with a translocating SecYEG	ELECTRON MICROSCOPY	3.33	2884
100	5GAG\|1\|A	RNC in complex with SRP-SR in the closed state	ELECTRON MICROSCOPY	3.8	2883
101	5NP6\|1\|Y	70S structure prior to bypassing	ELECTRON MICROSCOPY	3.6	2879
102	5L3P\|1\|A	Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex	ELECTRON MICROSCOPY	3.7	2866
103	5GAH\|1\|A	RNC in complex with SRP with detached NG domain	ELECTRON MICROSCOPY	3.8	2883
104	5GAD\|1\|A	RNC-SRP-SR complex early state	ELECTRON MICROSCOPY	3.7	2883
105	5MDY\|1\|1	Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)	ELECTRON MICROSCOPY	3.35	2881
106	6C4H\|1\|A	Conformation of methylated GGQ in the peptidyl transferase center during translation termination (PTC region)	ELECTRON MICROSCOPY	3.1	619
107	6C4I\|1\|A	Conformation of methylated GGQ in the peptidyl transferase center during translation termination	ELECTRON MICROSCOPY	3.24	2882
108	5MDV\|1\|1	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	ELECTRON MICROSCOPY	2.97	2881
109	5MDW\|1\|1	Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)	ELECTRON MICROSCOPY	3.06	2881
110	5MDZ\|1\|1	Structure of the 70S ribosome (empty A site)	ELECTRON MICROSCOPY	3.1	2881
111	5NWY\|1\|N	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	ELECTRON MICROSCOPY	2.9	2898
112	5JU8\|1\|BA	Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA	ELECTRON MICROSCOPY	3.6	2897
113	5JTE\|1\|BA	Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA	ELECTRON MICROSCOPY	3.6	2897
114	3J9Z\|1\|LA	Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G	ELECTRON MICROSCOPY	3.6	2904
115	3JCD\|1\|A	Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)	ELECTRON MICROSCOPY	3.7	2903
116	3JCE\|1\|A	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	ELECTRON MICROSCOPY	3.2	2903
117	5H5U\|1\|A	Mechanistic insights into the alternative translation termination by ArfA and RF2	ELECTRON MICROSCOPY	3.01	2902
118	5LZD\|1\|A	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)	ELECTRON MICROSCOPY	3.4	2879
119	5LZE\|1\|A	Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)	ELECTRON MICROSCOPY	3.5	2876
120	5LZA\|1\|A	Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)	ELECTRON MICROSCOPY	3.6	2877
121	6BU8\|1\|01	70S ribosome with S1 domains 1 and 2 (Class 1)	ELECTRON MICROSCOPY	3.5	2903
122	5WE6\|1\|A	70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA	ELECTRON MICROSCOPY	3.4	2876
123	5WDT\|1\|A	70S ribosome-EF-Tu H84A complex with GppNHp	ELECTRON MICROSCOPY	3	2876
124	5WE4\|1\|A	70S ribosome-EF-Tu wt complex with GppNHp	ELECTRON MICROSCOPY	3.1	2876
125	5O2R\|1\|A	Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosome	ELECTRON MICROSCOPY	3.4	2900
126	5MGP\|1\|A	Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs	ELECTRON MICROSCOPY	3.1	2900
127	5KCS\|1\|1A	Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution	ELECTRON MICROSCOPY	3.9	2876
128	5AFI\|1\|A	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	2876
129	3J9Y\|1\|A	Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome	ELECTRON MICROSCOPY	3.9	2876
130	5UYM\|1\|01	70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)	ELECTRON MICROSCOPY	3.2	2903
131	5UYQ\|1\|01	70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)	ELECTRON MICROSCOPY	3.8	2903
132	5UYP\|1\|01	70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)	ELECTRON MICROSCOPY	3.9	2903
133	5UYN\|1\|01	70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)	ELECTRON MICROSCOPY	4	2903
134	5UYL\|1\|01	70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)	ELECTRON MICROSCOPY	3.6	2903
135	5UYK\|1\|01	70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)	ELECTRON MICROSCOPY	3.9	2903
136	5U9F\|1\|01	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)	ELECTRON MICROSCOPY	3.2	2903
137	5U9G\|1\|01	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)	ELECTRON MICROSCOPY	3.2	2903
138	5KPS\|1\|28	Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)	ELECTRON MICROSCOPY	3.9	2903
139	5KPX\|1\|27	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)	ELECTRON MICROSCOPY	3.9	2903
140	5KPW\|1\|27	Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)	ELECTRON MICROSCOPY	3.9	2903
141	5IQR\|1\|1	Structure of RelA bound to the 70S ribosome	ELECTRON MICROSCOPY	3	2882
142	5U4I\|1\|A	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	ELECTRON MICROSCOPY	3.5	2887
143	5U4J\|1\|A	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome	ELECTRON MICROSCOPY	3.7	9

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_4.0_83717.34 Obsolete

Release history

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