#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14WF9|1|Y (rep)5S ribosomal RNA5S ribosomal RNAStaphylococcus aureusBacteriaRF00001The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycinX-ray diffraction3.432015-10-21
25HKV|1|Y5S ribosomal RNA5S ribosomal RNAStaphylococcus aureusBacteriaRF00001The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lincomycinX-ray diffraction3.662017-05-03
34WFA|1|Y5S ribosomal RNA5S rRNAStaphylococcus aureusBacteriaRF00001The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolidX-ray diffraction3.392015-10-21
45HL7|1|Y5S ribosomal RNA5S ribosomal RNAStaphylococcus aureusBacteriaRF00001The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lefamulinX-ray diffraction3.552016-12-21
54WCE|1|Y5S ribosomal RNA5S rRNAStaphylococcus aureusBacteriaRF00001The crystal structure of the large ribosomal subunit of Staphylococcus aureusX-ray diffraction3.532015-10-21
64WFB|1|Y5S ribosomal RNA5S rRNAStaphylococcus aureusBacteriaRF00001The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205X-ray diffraction3.432015-10-21
75NRG|1|Y5S ribosomal RNA5S ribosomal RNAStaphylococcus aureusBacteriaRF00001The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with RB02X-ray diffraction3.442017-08-09
86HMA|1|B5S ribosomal RNA5S ribosomal RNAStaphylococcus aureusBacteriaRF00001Improved model derived from cryo-EM map of Staphylococcus aureus large ribosomal subunitElectron microscopy2.652018-11-14
95NGM|1|AB5S ribosomal RNA5S Ribosomal RNAStaphylococcus aureusBacteriaRF000012.9S structure of the 70S ribosome composing the S. aureus 100S complexElectron microscopy2.92017-10-04
105T7V|1|C5S ribosomal RNA5S ribosomal RNAStaphylococcus aureusBacteriaRF00001Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)Electron microscopy3.62017-05-31
115ND8|1|B5S ribosomal RNA5S ribosomal RNAStaphylococcus aureusBacteriaRF00001Hibernating ribosome from Staphylococcus aureus (Unrotated state)Electron microscopy3.72017-06-28
125ND9|1|B5S ribosomal RNA5S ribosomal RNAStaphylococcus aureusBacteriaRF00001Hibernating ribosome from Staphylococcus aureus (Rotated state)Electron microscopy3.72017-06-28
135LI0|1|B5S ribosomal RNA5S ribosomal RNAStaphylococcus aureusBacteriaRF0000170S ribosome from Staphylococcus aureusElectron microscopy3.82016-12-28
145TCU|1|C5S ribosomal RNA5S rRNA CHAINStaphylococcus aureusBacteriaRF00001Methicillin sensitive Staphylococcus aureus 70S ribosomeElectron microscopy3.92017-05-24

Release history

Release3.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.65
Date2018-11-162018-11-232018-11-302018-12-072018-12-142018-12-212018-12-282019-01-042019-01-112019-01-182019-01-252019-02-012019-02-082019-02-152019-02-222019-03-012019-03-082019-03-15

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_83891.11NR_4.0_83891.103.48(13) 4WCE|1|Y, 4WF9|1|Y, 4WFA|1|Y, 4WFB|1|Y, 5HKV|1|Y, 5HL7|1|Y, 5LI0|1|B, 5ND8|1|B, 5ND9|1|B, 5NGM|1|AB, 5NRG|1|Y, 5T7V|1|C, 5TCU|1|C(1) 6HMA|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_83891.11NR_4.0_83891.123.66(14) 4WCE|1|Y, 4WF9|1|Y, 4WFA|1|Y, 4WFB|1|Y, 5HKV|1|Y, 5HL7|1|Y, 5LI0|1|B, 5ND8|1|B, 5ND9|1|B, 5NGM|1|AB, 5NRG|1|Y, 5T7V|1|C, 5TCU|1|C, 6HMA|1|B(0) (2) 6DDD|1|2, 6DDG|1|2

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
15T7V|1|CMethicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)ELECTRON MICROSCOPY3.6114
25TCU|1|CMethicillin sensitive Staphylococcus aureus 70S ribosomeELECTRON MICROSCOPY3.9114
35ND8|1|BHibernating ribosome from Staphylococcus aureus (Unrotated state)ELECTRON MICROSCOPY3.7114
45ND9|1|BHibernating ribosome from Staphylococcus aureus (Rotated state)ELECTRON MICROSCOPY3.7114
55LI0|1|B70S ribosome from Staphylococcus aureusELECTRON MICROSCOPY3.8114
64WFB|1|YThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205X-RAY DIFFRACTION3.43114
74WF9|1|YThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycinX-RAY DIFFRACTION3.43114
84WFA|1|YThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolidX-RAY DIFFRACTION3.39114
94WCE|1|YThe crystal structure of the large ribosomal subunit of Staphylococcus aureusX-RAY DIFFRACTION3.53114
105HKV|1|YThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lincomycinX-RAY DIFFRACTION3.66114
115NRG|1|YThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with RB02X-RAY DIFFRACTION3.44114
125HL7|1|YThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lefamulinX-RAY DIFFRACTION3.55114
135NGM|1|AB2.9S structure of the 70S ribosome composing the S. aureus 100S complexELECTRON MICROSCOPY2.9115
146HMA|1|BImproved model derived from cryo-EM map of Staphylococcus aureus large ribosomal subunitELECTRON MICROSCOPY2.65115

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

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