Equivalence class NR_4.0_84167.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6ERI|1|AA+ 6ERI|1|AB (rep) | Large subunit ribosomal RNA | 23S ribosomal RNA, 4.5S ribosomal RNA | Spinacia oleracea | Chloroplast | RF02541 | Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor | Electron microscopy | 3 | 2802 | 2018-04-18 |
| 2 | 5MMI|1|A+ 5MMI|1|W | Large subunit ribosomal RNA | 23S ribosomal RNA, 4.5S ribosomal RNA | Spinacia oleracea | Chloroplast | RF02541 | Structure of the large subunit of the chloroplast ribosome | Electron microscopy | 3.2 | 2904 | 2017-01-11 |
| 3 | 5MMM|1|A+ 5MMM|1|W | Large subunit ribosomal RNA | 23S ribosomal RNA, 4.5S ribosomal RNA | Spinacia oleracea | Chloroplast | RF02541 | Structure of the 70S chloroplast ribosome | Electron microscopy | 3.4 | 2904 | 2017-01-11 |
| 4 | 5X8T|1|A | Large subunit ribosomal RNA | 23S rRNA | Spinacia oleracea | Chloroplast | RF02541 | Structure of the 50S large subunit of chloroplast ribosome from spinach | Electron microscopy | 3.3 | 2809 | 2017-06-07 |
| 5 | 5X8P|1|A | Large subunit ribosomal RNA | 23S rRNA | Spinacia oleracea | Chloroplast | RF02541 | Structure of the 70S chloroplast ribosome from spinach | Electron microscopy | 3.4 | 2809 | 2017-06-14 |
| 6 | 5MLC|1|A+ 5MLC|1|C | Large subunit ribosomal RNA | 23S ribosomal RNA, chloroplastic, 4.8S ribosomal RNA, chloroplastic | Spinacia oleracea | Chloroplast | RF02541 | Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions | Electron microscopy | 3.6 | 2843 | 2016-12-28 |
| 7 | 5H1S|1|A | Large subunit ribosomal RNA | 23S rRNA | Spinacia oleracea | Eukarya | RF02541 | Structure of the large subunit of the chloro-ribosome | Electron microscopy | 3.5 | 2799 | 2017-02-01 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 5H1S|1|A | Structure of the large subunit of the chloro-ribosome | ELECTRON MICROSCOPY | 3.5 | 2799 | |
| 2 | 5X8P|1|A | Structure of the 70S chloroplast ribosome from spinach | ELECTRON MICROSCOPY | 3.4 | 2809 | |
| 3 | 5X8T|1|A | Structure of the 50S large subunit of chloroplast ribosome from spinach | ELECTRON MICROSCOPY | 3.3 | 2809 | |
| 4 | 5MMM|1|A+ 5MMM|1|W | Structure of the 70S chloroplast ribosome | ELECTRON MICROSCOPY | 3.4 | 2904 | |
| 5 | 5MMI|1|A+ 5MMI|1|W | Structure of the large subunit of the chloroplast ribosome | ELECTRON MICROSCOPY | 3.2 | 2904 | |
| 6 | 6ERI|1|AA+ 6ERI|1|AB | Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor | ELECTRON MICROSCOPY | 3 | 2802 | |
| 7 | 5MLC|1|A+ 5MLC|1|C | Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions | ELECTRON MICROSCOPY | 3.6 | 2843 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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