NR_4.0_90506.83

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	8CEH\|1\|AA+ 8CEH\|1\|CC (rep)	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Translocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	Electron microscopy	2.05	3355	2023-09-20
2	8CDR\|1\|AA+ 8CDR\|1\|CC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	Electron microscopy	2.04	3355	2023-09-20
3	8T2Y\|1\|A1+ 8T2Y\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, PRE	Electron microscopy	2.2	3317	2024-12-11
4	8PFR\|1\|A+ 8PFR\|1\|LD	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Mouse RPL39L integrated into the yeast 60S ribosomal subunit	Electron microscopy	2.15	3196	2024-06-26
5	7ZW0\|1\|LA+ 7ZW0\|1\|LD	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA (RDN25-1), 5.8S ribosomal RNA (RDN58-1)	Saccharomyces cerevisiae W303	Eukarya	RF02543 + RF00002	FAP-80S Complex - Rotated state	Electron microscopy	2.4	3375	2022-10-05
6	8P8N\|1\|A+ 8P8N\|1\|LD	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Mouse RPL39 integrated into the yeast 60S ribosomal subunit	Electron microscopy	2.15	3200	2024-06-12
7	8EVT\|1\|A1+ 8EVT\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) refined against a composite map	Electron microscopy	2.2	3350	2023-09-06
8	8P8U\|1\|A+ 8P8U\|1\|LD	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 60S ribosomal subunit	Electron microscopy	2.23	3203	2024-06-12
9	8BN3\|1\|1+ 8BN3\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S, ES7s delta, eIF5A, Stm1 containing	Electron microscopy	2.4	3301	2024-01-10
10	8T2Z\|1\|A1+ 8T2Z\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, POST	Electron microscopy	2.4	3319	2024-12-11
11	8AGX\|1\|f+ 8AGX\|1\|i	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast RQC complex in state with the RING domain of Ltn1 in the IN position	Electron microscopy	2.4	3374	2023-03-08
12	8EVP\|1\|A1+ 8EVP\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure I	Electron microscopy	2.38	3356	2023-09-06
13	8T2X\|1\|A1+ 8T2X\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, A-site tRNA, messenger RNA and eIF5A, PRE	Electron microscopy	2.46	3374	2024-12-11
14	8EWC\|1\|A1+ 8EWC\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure II	Electron microscopy	2.45	3356	2023-09-06
15	8AAF\|1\|f+ 8AAF\|1\|i	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast RQC complex in state G	Electron microscopy	2.5	3374	2023-03-08
16	8AGT\|1\|f+ 8AGT\|1\|i	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast RQC complex in state F	Electron microscopy	2.6	3374	2023-03-08
17	8CGN\|1\|AA+ 8CGN\|1\|CC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Non-rotated 80S S. cerevisiae ribosome with ligands	Electron microscopy	2.28	3355	2023-09-20
18	8AGZ\|1\|f+ 8AGZ\|1\|i	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position	Electron microscopy	2.6	3374	2023-03-08
19	8AGV\|1\|f+ 8AGV\|1\|i	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast RQC complex in state H	Electron microscopy	2.6	3374	2023-03-08
20	6T4Q\|1\|C1+ 6T4Q\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.	Electron microscopy	2.6	3342	2019-12-25
21	8EVS\|1\|A1+ 8EVS\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure II	Electron microscopy	2.62	3356	2023-09-06
22	8AGW\|1\|f+ 8AGW\|1\|i	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast RQC complex in state D	Electron microscopy	2.6	3374	2023-03-08
23	7UQB\|1\|1+ 7UQB\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae BY4741	Eukarya	RF02543 + RF00002	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1-D52A strain with AlF4	Electron microscopy	2.43	3149	2023-03-15
24	8AGU\|1\|f+ 8AGU\|1\|i	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast RQC complex in state E	Electron microscopy	2.7	3374	2023-03-08
25	8ZHC\|1\|LA+ 8ZHC\|1\|LC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA (3393-MER), 5.8S rRNA (158-MER)	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV	Electron microscopy	2.3	3342	2025-05-21
26	8EVQ\|1\|A1+ 8EVQ\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I	Electron microscopy	2.72	3356	2023-09-06
27	8HFR\|1\|1e+ 8HFR\|1\|3n	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	NPC-trapped pre-60S particle	Electron microscopy	2.64	3430	2023-04-12
28	9F9S\|1\|M1+ 9F9S\|1\|M2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	Saccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1) with modifications, Saccharomyces cerevisiae S288C 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast SDD1 Disome with Mbf1	Electron microscopy	2.9	3348	2024-12-04
29	7V08\|1\|1+ 7V08\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae BY4741	Eukarya	RF02543 + RF00002	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strain	Electron microscopy	2.36	3144	2023-03-15
30	7MPJ\|1\|A1+ 7MPJ\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Stm1 bound vacant 80S structure isolated from nop1-D243A	Electron microscopy	2.7	3295	2022-05-11
31	8EWB\|1\|A1+ 8EWB\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure III	Electron microscopy	2.87	3356	2023-09-06
32	7UOO\|1\|1+ 7UOO\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae BY4741	Eukarya	RF02543 + RF00002	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state	Electron microscopy	2.34	3149	2023-03-15
33	7TOO\|1\|A25S+ 7TOO\|1\|A58S	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	Electron microscopy	2.7	3352	2022-05-25
34	7ZUX\|1\|5+ 7ZUX\|1\|3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Collided ribosome in a disome unit from S. cerevisiae	Electron microscopy	2.5	3321	2023-02-22
35	7TOP\|1\|A25S+ 7TOP\|1\|A58S	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20	Electron microscopy	2.4	3352	2022-05-25
36	9F9S\|1\|L1+ 9F9S\|1\|L2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	Saccharomyces cerevisiae S288C 25S ribosomal RNA (RDN25-1), Saccharomyces cerevisiae S288C 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast SDD1 Disome with Mbf1	Electron microscopy	2.9	3274	2024-12-04
37	7N8B\|1\|A1+ 7N8B\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S, 5.8S	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cycloheximide bound vacant 80S structure isolated from cbf5-D95A	Electron microscopy	3.05	3314	2022-05-11
38	6TB3\|1\|BQ+ 6TB3\|1\|BS	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complex	Electron microscopy	2.8	3381	2020-04-22
39	8EVR\|1\|A1+ 8EVR\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II	Electron microscopy	2.87	3356	2023-09-06
40	8P9A\|1\|AR+ 8P9A\|1\|AT	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8 ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	80S yeast ribosome in complex with Methyllissoclimide	X-ray diffraction	2.9	3288	2024-11-27
41	8CG8\|1\|AA+ 8CG8\|1\|CC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Translocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	Electron microscopy	2.57	3355	2023-09-20
42	8P8M\|1\|A+ 8P8M\|1\|LD	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 60S ribosomal subunit, RPL39 deletion	Electron microscopy	2.66	3193	2024-06-12
43	8P9A\|1\|1+ 8P9A\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8 ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	80S yeast ribosome in complex with Methyllissoclimide	X-ray diffraction	2.9	3307	2024-11-27
44	7MPI\|1\|A1+ 7MPI\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Stm1 bound vacant 80S structure isolated from cbf5-D95A	Electron microscopy	3.05	3295	2022-05-11
45	6SNT\|1\|1+ 6SNT\|1\|3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, Saccharomyces cerevisiae S288C 25S ribosomal RNA (RDN25-1), rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S ribosome stalled on SDD1 mRNA.	Electron microscopy	2.8	3342	2020-03-04
46	8ZH3\|1\|LA+ 8ZH3\|1\|LC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA (3393-MER), 5.8S rRNA (158-MER)	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	80S ribosome with A/P-P/E tRNA and mRNA of WNV	Electron microscopy	2.7	3342	2025-05-21
47	7UQZ\|1\|1+ 7UQZ\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae BY4741	Eukarya	RF02543 + RF00002	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strain	Electron microscopy	2.44	3144	2023-03-15
48	8CF5\|1\|AA+ 8CF5\|1\|CC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	Electron microscopy	2.71	3348	2023-09-20
49	8T30\|1\|A1+ 8T30\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypomethylated yeast 80S bound with cycloheximide, unmodified U2921, mid rotated	Electron microscopy	2.88	3317	2024-12-11
50	8ZGY\|1\|LA+ 8ZGY\|1\|LC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA (3393-MER), 5.8S rRNA (158-MER)	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	80S ribosome with P/E tRNA and mRNA of WNV	Electron microscopy	2.8	3342	2025-05-21
51	7ZPQ\|1\|5+ 7ZPQ\|1\|3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)	Electron microscopy	3.47	3342	2023-02-22
52	5TBW\|1\|1+ 5TBW\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-ray diffraction	3	3307	2017-07-26
53	8ZHB\|1\|LA+ 8ZHB\|1\|LC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA (3393-MER), 5.8S rRNA (158-MER)	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	80S ribosome with A/A P/E tRNA and mRNA of WNV	Electron microscopy	2.6	3342	2025-05-21
54	5TBW\|1\|AR+ 5TBW\|1\|AT	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-ray diffraction	3	3307	2017-07-26
55	8T3A\|1\|A1+ 8T3A\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, sordarin, and hibernating factor Los2	Electron microscopy	2.86	3372	2024-12-11
56	8K82\|1\|C1+ 8K82\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	23S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of the yeast 80S ribosome with tigecycline, Not5 and P-site tRNA	Electron microscopy	3	3362	2024-07-10
57	9R9O\|1\|C1+ 9R9O\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S with nascent chain in complex with Ssb1-ADP in the S1 state	Electron microscopy	2.9	3221	2025-12-24
58	8PNN\|1\|AR+ 8PNN\|1\|AT	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	80S yeast ribosome in complex with Bromolissoclimide	X-ray diffraction	2.9	3294	2025-05-28
59	4V88\|1\|A5+ 4V88\|1\|A8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-ray diffraction	3	3308	2014-07-09
60	4V88\|1\|A1+ 4V88\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-ray diffraction	3	3307	2014-07-09
61	8PNN\|1\|1+ 8PNN\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	80S yeast ribosome in complex with Bromolissoclimide	X-ray diffraction	2.9	3307	2025-05-28
62	8T3D\|1\|A1+ 8T3D\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure III	Electron microscopy	2.95	3374	2024-12-11
63	8EUB\|1\|A1+ 8EUB\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure I	Electron microscopy	2.52	3356	2023-09-06
64	6YLG\|1\|1+ 6YLG\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)	Electron microscopy	3	3193	2020-07-29
65	8P4V\|1\|AR+ 8P4V\|1\|AT	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	80S yeast ribosome in complex with HaterumaimideQ	X-ray diffraction	3.16	3305	2024-10-16
66	8P4V\|1\|1+ 8P4V\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	80S yeast ribosome in complex with HaterumaimideQ	X-ray diffraction	3.16	3307	2024-10-16
67	6Q8Y\|1\|BQ+ 6Q8Y\|1\|BS	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complex	Electron microscopy	3.1	3319	2019-03-13
68	8ZGR\|1\|LA+ 8ZGR\|1\|LC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA (3393-MER), 5.8S rRNA (158-MER)	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	80S ribosome with A/A tRNA and mRNA of WNV	Electron microscopy	2.7	3342	2025-05-21
69	7AZY\|1\|E+ 7AZY\|1\|G	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Context-specific inhibition of eukaryotic translation by macrolide antibiotics	Electron microscopy	2.877	3319	2021-05-19
70	8K2D\|1\|C1+ 8K2D\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	23S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of the yeast 80S ribosome with tigecycline, eEF2, Stm1 and eIF5A	Electron microscopy	3.2	3345	2024-07-10
71	6XIR\|1\|1+ 6XIR\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	35S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative Stress	Electron microscopy	3.2	3271	2020-08-26
72	8P85\|1\|AR+ 8P85\|1\|AT	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	80S yeast ribosome in complex with Fluorolissoclimide	X-ray diffraction	2.9	3305	2025-06-25
73	6T7I\|1\|C1+ 6T7I\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.	Electron microscopy	3.2	3342	2019-12-25
74	8P85\|1\|1+ 8P85\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	80S yeast ribosome in complex with Fluorolissoclimide	X-ray diffraction	2.9	3292	2025-06-25
75	9R9P\|1\|C1+ 9R9P\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state	Electron microscopy	3	3221	2025-12-24
76	6TNU\|1\|BQ+ 6TNU\|1\|BS	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.	Electron microscopy	3.1	3342	2020-04-22
77	6T7T\|1\|C1+ 6T7T\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of yeast 80S ribosome stalled on poly(A) tract.	Electron microscopy	3.1	3342	2019-12-25
78	8BIP\|1\|1+ 8BIP\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex	Electron microscopy	3.1	3459	2023-02-08
79	7OSA\|1\|25S+ 7OSA\|1\|58S	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-ray diffraction	3	3338	2021-12-08
80	5I4L\|1\|5+ 5I4L\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-ray diffraction	3.1	3308	2016-06-22
81	6RZZ\|1\|A+ 6RZZ\|1\|y	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.2	3302	2019-06-26
82	8UTI\|1\|A+ 8UTI\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Eukaryotic 80S ribosome with Reh1 and A/P site tRNA	Electron microscopy	3.13	3202	2024-11-06
83	8T3E\|1\|A1+ 8T3E\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure IV	Electron microscopy	3.04	3374	2024-12-11
84	5I4L\|1\|1+ 5I4L\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-ray diffraction	3.1	3307	2016-06-22
85	9OFV\|1\|f+ 9OFV\|1\|i	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex	Electron microscopy	3.16	3374	2025-06-11
86	6Z6K\|1\|C1+ 6Z6K\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomes	Electron microscopy	3.4	3284	2020-07-29
87	5MEI\|1\|AR+ 5MEI\|1\|AT	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Agelastatin A bound to the 80S ribosome	X-ray diffraction	3.5	3307	2017-06-28
88	6QIK\|1\|A+ 6QIK\|1\|y	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.1	3302	2019-06-26
89	5MEI\|1\|1+ 5MEI\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Agelastatin A bound to the 80S ribosome	X-ray diffraction	3.5	3307	2017-06-28
90	7U0H\|1\|1+ 7U0H\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae BY4741	Eukarya	RF02543 + RF00002	State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model	Electron microscopy	2.76	2880	2022-12-14
91	8T3F\|1\|A1+ 8T3F\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure V	Electron microscopy	3.09	3374	2024-12-11
92	6HHQ\|1\|AR+ 6HHQ\|1\|AT	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-ray diffraction	3.1	3305	2019-02-20
93	5OBM\|1\|5+ 5OBM\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-ray diffraction	3.4	3292	2017-12-13
94	6HHQ\|1\|1+ 6HHQ\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-ray diffraction	3.1	3307	2019-02-20
95	8T3B\|1\|A1+ 8T3B\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure I	Electron microscopy	3.08	3374	2024-12-11
96	5OBM\|1\|1+ 5OBM\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-ray diffraction	3.4	3256	2017-12-13
97	8UT0\|1\|A+ 8UT0\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA	Electron microscopy	3.22	3342	2024-11-06
98	6N8O\|1\|A+ 6N8O\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunit	Electron microscopy	3.5	3359	2019-03-13
99	6WOO\|1\|5+ 6WOO\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP	Electron microscopy	2.9	3428	2020-09-23
100	7BT6\|1\|1+ 7BT6\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	RDN25-1 rRNA, RDN5.8-1 rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)	Electron microscopy	3.12	3120	2020-10-28
101	7RR5\|1\|C1+ 7RR5\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of ribosomal complex bound with Rbg1/Tma46	Electron microscopy	3.23	3379	2021-11-10
102	6YLH\|1\|1+ 6YLH\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Rix1-Rea1 pre-60S particle - full composite structure	Electron microscopy	3.1	3193	2020-07-29
103	5LYB\|1\|5+ 5LYB\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA, aminoacyl-tRNA fragment ACCPmn	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-ray diffraction	3.25	3308	2016-11-23
104	5NDV\|1\|1+ 5NDV\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-ray diffraction	3.3	3235	2017-12-13
105	6R87\|1\|1+ 6R87\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)	Electron microscopy	3.4	3474	2019-06-26
106	5ON6\|1\|1+ 5ON6\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of haemanthamine bound to the 80S ribosome	X-ray diffraction	3.1	3307	2018-02-28
107	7B7D\|1\|LA+ 7B7D\|1\|LC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs	Electron microscopy	3.3	3381	2021-03-10
108	5LYB\|1\|1+ 5LYB\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA, aminoacyl-tRNA fragment ACCPmn	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-ray diffraction	3.25	3307	2016-11-23
109	6M62\|1\|1+ 6M62\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	RDN25-1 rRNA, RDN58-1 rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.	Electron microscopy	3.2	3130	2020-08-26
110	6N8M\|1\|A+ 6N8M\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S RNA, Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of pre-Lsg1 (PL) pre-60S ribosomal subunit	Electron microscopy	3.5	3361	2019-03-13
111	5ON6\|1\|AR+ 5ON6\|1\|AT	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of haemanthamine bound to the 80S ribosome	X-ray diffraction	3.1	3307	2018-02-28
112	6R86\|1\|1+ 6R86\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast Vms1-60S ribosomal subunit complex (post-state)	Electron microscopy	3.4	3418	2019-07-31
113	7ZS5\|1\|1+ 7ZS5\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA	Electron microscopy	3.2	3406	2023-02-22
114	5NDV\|1\|5+ 5NDV\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-ray diffraction	3.3	3245	2017-12-13
115	7R7A\|1\|1+ 7R7A\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae BY4741	Eukarya	RF02543 + RF00002	State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model	Electron microscopy	3.04	2729	2022-11-09
116	6S47\|1\|AA+ 6S47\|1\|AC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1	Electron microscopy	3.28	3307	2019-07-24
117	7BTB\|1\|1+ 7BTB\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	RDN25-1 rRNA, RDN5.8-1 rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)	Electron microscopy	3.22	3216	2020-10-28
118	7OHQ\|1\|1+ 7OHQ\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae	Electron microscopy	3.1	3211	2021-11-03
119	6N8J\|1\|1+ 6N8J\|1\|3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunit	Electron microscopy	3.5	3205	2019-03-13
120	5NDW\|1\|5+ 5NDW\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-ray diffraction	3.7	3238	2017-12-13
121	5NDW\|1\|1+ 5NDW\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-ray diffraction	3.7	3248	2017-12-13
122	7NAC\|1\|1+ 7NAC\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae BY4741	Eukarya	RF02543 + RF00002	State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model	Electron microscopy	3.04	2819	2022-11-09
123	6QT0\|1\|A+ 6QT0\|1\|y	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.4	3320	2019-06-26
124	6N8L\|1\|1+ 6N8L\|1\|3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of early cytoplasmic-late (ECL) pre-60S ribosomal subunit	Electron microscopy	3.6	3358	2019-03-13
125	7OSM\|1\|25S+ 7OSM\|1\|58S	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-ray diffraction	3	3320	2021-12-08
126	6Z6J\|1\|C1+ 6Z6J\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of yeast Lso2 bound to 80S ribosomes under native condition	Electron microscopy	3.4	3284	2020-07-29
127	8Z70\|1\|A+ 8Z70\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs during mRNA decoding	Electron microscopy	3.2	3345	2024-12-11
128	6N8K\|1\|1+ 6N8K\|1\|3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunit	Electron microscopy	3.6	3358	2019-03-13
129	6R84\|1\|1+ 6R84\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)	Electron microscopy	3.6	3474	2019-06-26
130	5M1J\|1\|14+ 5M1J\|1\|44	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Nonstop ribosomal complex bound with Dom34 and Hbs1	Electron microscopy	3.3	3453	2017-01-18
131	3JCT\|1\|1+ 3JCT\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	RDN25-1 rRNA, RDN58-1 rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-em structure of eukaryotic pre-60S ribosomal subunits	Electron microscopy	3.08	3216	2016-06-01
132	6RI5\|1\|A+ 6RI5\|1\|y	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S RNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.3	3303	2019-06-26
133	7UG6\|1\|1+ 7UG6\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922	Electron microscopy	2.9	3216	2022-12-21
134	6SV4\|1\|YQ+ 6SV4\|1\|YS	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	The cryo-EM structure of SDD1-stalled collided trisome.	Electron microscopy	3.3	3284	2020-03-04
135	6T83\|1\|1b+ 6T83\|1\|3b	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	Electron microscopy	4	3342	2019-12-25
136	7OF1\|1\|1+ 7OF1\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae	Electron microscopy	3.1	2945	2021-11-03
137	5FCJ\|1\|5+ 5FCJ\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome	X-ray diffraction	3.1	3308	2016-05-11
138	8Y0U\|1\|C1+ 8Y0U\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	dormant ribosome with STM1	Electron microscopy	3.59	3379	2024-02-07
139	7OH3\|1\|1+ 7OH3\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Nog1-TAP associated immature ribosomal particle population B from S. cerevisiae	Electron microscopy	3.4	3168	2021-11-03
140	5FCJ\|1\|1+ 5FCJ\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome	X-ray diffraction	3.1	3307	2016-05-11
141	5APO\|1\|5+ 5APO\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1	Electron microscopy	3.41	3270	2015-12-16
142	7NRC\|1\|LA+ 7NRC\|1\|LC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA (3184-MER), 5.8S rRNA (158-MER)	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A	Electron microscopy	3.9	3342	2021-05-05
143	6N8N\|1\|A+ 6N8N\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunit	Electron microscopy	3.8	3361	2019-03-13
144	8XU8\|1\|A+ 8XU8\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation	Electron microscopy	3.4	3347	2024-12-11
145	8V87\|1\|1+ 8V87\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae BY4741	Eukarya	RF02543 + RF00002	60S ribosome biogenesis intermediate (Dbp10 post-catalytic structure - Overall map)	Electron microscopy	2.66	2644	2024-05-01
146	5NDG\|1\|5+ 5NDG\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-ray diffraction	3.7	3284	2017-12-13
147	8BJQ\|1\|1+ 8BJQ\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex	Electron microscopy	3.8	3459	2023-02-08
148	8V83\|1\|1+ 8V83\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	Saccharomyces cerevisiae S288C 25S ribosomal RNA, Saccharomyces cerevisiae S288C 5.8S ribosomal RNA	Saccharomyces cerevisiae BY4741	Eukarya	RF02543 + RF00002	60S ribosome biogenesis intermediate (Dbp10 pre-catalytic structure - Overall map)	Electron microscopy	2.53	2165	2024-05-01
149	6SV4\|1\|ZQ+ 6SV4\|1\|ZS	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	The cryo-EM structure of SDD1-stalled collided trisome.	Electron microscopy	3.3	3284	2020-03-04
150	5NDG\|1\|1+ 5NDG\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-ray diffraction	3.7	3236	2017-12-13
151	6GQV\|1\|1+ 6GQV\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)	Electron microscopy	4	3381	2018-07-11
152	6FT6\|1\|1+ 6FT6\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 7S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors	Electron microscopy	3.9	3220	2018-03-28
153	5JUP\|1\|B+ 5JUP\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)	Electron microscopy	3.5	3467	2016-10-05
154	6GQB\|1\|1+ 6GQB\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S ribosomal RNA, Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)	Electron microscopy	3.9	3381	2018-07-11
155	6HD7\|1\|1+ 6HD7\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of the ribosome-NatA complex	Electron microscopy	3.4	3493	2018-12-19
156	6T83\|1\|Aa+ 6T83\|1\|Ca	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	Electron microscopy	4	3284	2019-12-25
157	7Z34\|1\|1+ 7Z34\|1\|3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	35S pre-ribosomal RNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Structure of pre-60S particle bound to DRG1(AFG2)	Electron microscopy	3.8	3504	2022-09-21
158	5APN\|1\|5+ 5APN\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1	Electron microscopy	3.91	3270	2015-12-16
159	6OIG\|1\|5+ 6OIG\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Subunit joining exposes nascent pre-40S rRNA for processing and quality control	Electron microscopy	3.8	3401	2020-09-30
160	8BQX\|1\|BQ+ 8BQX\|1\|BS	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S ribosome in complex with Map1 (conformation 2)	Electron microscopy	3.8	3459	2023-03-22
161	6YLY\|1\|1+ 6YLY\|1\|3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	pre-60S State NE2 (TAP-Flag-Nop53)	Electron microscopy	3.8	2834	2020-07-29
162	5MC6\|1\|BQ+ 5MC6\|1\|BS	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae	Electron microscopy	3.8	3323	2017-01-18
163	8T3C\|1\|A1+ 8T3C\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II	Electron microscopy	3.86	3374	2024-12-11
164	8YLR\|1\|A+ 8YLR\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	State 6 (S6) of yeast 80S ribosome bound to 2 tRNAs and eEF2 and eEF3 during tranlocation	Electron microscopy	3.9	3350	2024-12-11
165	8BQD\|1\|BQ+ 8BQD\|1\|BS	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S ribosome in complex with Map1 (conformation 1)	Electron microscopy	3.9	3457	2023-03-22
166	8V84\|1\|1+ 8V84\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	Saccharomyces cerevisiae 25S ribosomal RNA, Saccharomyces cerevisiae 5.8S ribosomal RNA	Saccharomyces cerevisiae BY4741	Eukarya	RF02543 + RF00002	60S ribosome biogenesis intermediate (Dbp10 catalytic structure - Overall map)	Electron microscopy	2.7	2120	2024-05-01
167	6SV4\|1\|BQ+ 6SV4\|1\|BS	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	The cryo-EM structure of SDD1-stalled collided trisome.	Electron microscopy	3.3	3284	2020-03-04
168	6ELZ\|1\|1+ 6ELZ\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmes	Electron microscopy	3.3	2615	2017-12-27
169	7OHX\|1\|1+ 7OHX\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population A	Electron microscopy	3.3	1709	2021-11-03
170	8YLD\|1\|A+ 8YLD\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	State 4a (S4a) of yeast 80S ribosome bound to 2 tRNAs and open eEF3 and eEF2 during translocation	Electron microscopy	3.9	3351	2024-12-11
171	6YLX\|1\|1+ 6YLX\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	pre-60S State NE1 (TAP-Flag-Nop53)	Electron microscopy	3.9	2692	2020-07-29
172	5TGM\|1\|1+ 5TGM\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA, Peptidyl-tRNA analog ACCA-Leu-Phe	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.5	3307	2017-01-18
173	5TGM\|1\|5+ 5TGM\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA, Peptidyl-tRNA analog ACCA-Leu-Phe	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.5	3308	2017-01-18
174	7OHU\|1\|1+ 7OHU\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population B	Electron microscopy	3.7	1840	2021-11-03
175	7OHV\|1\|1+ 7OHV\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population C	Electron microscopy	3.9	2296	2021-11-03
176	6EM1\|1\|1+ 6EM1\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes	Electron microscopy	3.6	1943	2017-12-27
177	5JUT\|1\|B+ 5JUT\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)	Electron microscopy	4	3467	2016-10-05
178	5H4P\|1\|1+ 5H4P\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1	Electron microscopy	3.07	3249	2017-01-25
179	7OHW\|1\|1+ 7OHW\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population B	Electron microscopy	3.5	1788	2021-11-03
180	7OHY\|1\|1+ 7OHY\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population B	Electron microscopy	3.9	1837	2021-11-03
181	8Z71\|1\|A+ 8Z71\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	State 1a (S1a) of yeast 80S ribosome bound to open eEF3 and 2 tRNAs and eEF1A during mRNA decoding	Electron microscopy	3.6	3345	2024-12-11
182	7OHP\|1\|1+ 7OHP\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population A	Electron microscopy	3.9	1716	2021-11-03
183	6C0F\|1\|1+ 6C0F\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, Saccharomyces cerevisiae S288c 35S pre-ribosomal RNA miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast nucleolar pre-60S ribosomal subunit (state 2)	Electron microscopy	3.7	1515	2018-03-14
184	6EM3\|1\|1	Large subunit ribosomal RNA	25S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543	State A architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes	Electron microscopy	3.2	1250	2017-12-27
185	5JUO\|1\|B+ 5JUO\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)	Electron microscopy	4	3467	2016-10-05
186	9QJC\|1\|1	Large subunit ribosomal RNA	25S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543	Yeast pre-60S Domain II intermediate	Electron microscopy	3.2	509	2026-01-28
187	5Z3G\|1\|A+ 5Z3G\|1\|B	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of a nucleolar pre-60S ribosome (Rpf1-TAP)	Electron microscopy	3.65	1657	2018-04-11
188	8E5T\|1\|1+ 8E5T\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae BY4741	Eukarya	RF02543 + RF00002	Yeast co-transcriptional Noc1-Noc2 RNP assembly checkpoint intermediate	Electron microscopy	4	881	2023-04-12
189	5GAK\|1\|1+ 5GAK\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5A	Electron microscopy	3.88	3323	2016-02-24
190	4V7R\|1\|B1+ 4V7R\|1\|B3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S ribosome.	X-ray diffraction	4	3364	2014-07-09
191	4V7R\|1\|D1+ 4V7R\|1\|D3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S ribosome.	X-ray diffraction	4	3364	2014-07-09
192	5DGV\|1\|5+ 5DGV\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA, DNA (5'-R(CPCP(8AN)(Pro)*(Pro))-3')	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.1	3307	2016-12-14
193	5DAT\|1\|5+ 5DAT\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-ray diffraction	3.15	3327	2016-08-31
194	5DGV\|1\|1+ 5DGV\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA, DNA (5'-R(CPCP(8AN)(Pro)*(Pro))-3')	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.1	3306	2016-12-14
195	5DAT\|1\|1+ 5DAT\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-ray diffraction	3.15	3307	2016-08-31
196	5DGE\|1\|5+ 5DGE\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA, DNA (5'-R(CPCP*(NA))-3')	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-ray diffraction	3.45	3308	2017-01-25
197	5DGF\|1\|5+ 5DGF\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.3	3327	2016-12-14
198	5DGF\|1\|1+ 5DGF\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.3	3307	2016-12-14
199	5DGE\|1\|1+ 5DGE\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA, DNA (5'-R(CPCP*(NA))-3')	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-ray diffraction	3.45	3307	2017-01-25
200	5DC3\|1\|5+ 5DC3\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with non-modified eIF5A	X-ray diffraction	3.25	3327	2016-06-01
201	5TGA\|1\|5+ 5TGA\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.3	3308	2016-11-23
202	5TGA\|1\|1+ 5TGA\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.3	3307	2016-11-23
203	5DC3\|1\|1+ 5DC3\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with non-modified eIF5A	X-ray diffraction	3.25	3307	2016-06-01
204	5FCI\|1\|5+ 5FCI\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of the vacant uL3 W255C mutant 80S yeast ribosome	X-ray diffraction	3.4	3308	2016-05-11
205	5FCI\|1\|1+ 5FCI\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of the vacant uL3 W255C mutant 80S yeast ribosome	X-ray diffraction	3.4	3307	2016-05-11
206	8CCS\|1\|AA+ 8CCS\|1\|CC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex	Electron microscopy	1.97	3348	2023-09-20
207	8CIV\|1\|AA+ 8CIV\|1\|CC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	Electron microscopy	2.47	3355	2023-09-20
208	5JUU\|1\|B+ 5JUU\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)	Electron microscopy	4	3465	2016-10-05
209	6S05\|1\|A+ 6S05\|1\|y	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.9	3302	2019-06-26
210	4U4R\|1\|1+ 4U4R\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-ray diffraction	2.8	3307	2014-10-22
211	4U4R\|1\|5+ 4U4R\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-ray diffraction	2.8	3308	2014-10-22
212	4U3U\|1\|5+ 4U3U\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-ray diffraction	2.9	3308	2014-10-22
213	4U3U\|1\|1+ 4U3U\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-ray diffraction	2.9	3307	2014-10-22
214	4U3M\|1\|1+ 4U3M\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25s rRNA, 5.8s rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-ray diffraction	3	3307	2014-10-22
215	4U4Q\|1\|5+ 4U4Q\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-ray diffraction	3	3308	2014-10-22
216	4U3M\|1\|5+ 4U3M\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25s rRNA, 5.8s rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-ray diffraction	3	3308	2014-10-22
217	4U4U\|1\|1+ 4U4U\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-ray diffraction	3	3307	2014-10-22
218	4U4Q\|1\|1+ 4U4Q\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-ray diffraction	3	3307	2014-10-22
219	4U4U\|1\|5+ 4U4U\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-ray diffraction	3	3308	2014-10-22
220	4U52\|1\|5+ 4U52\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-ray diffraction	3	3308	2014-10-22
221	4U52\|1\|1+ 4U52\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-ray diffraction	3	3307	2014-10-22
222	4U6F\|1\|1+ 4U6F\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-ray diffraction	3.1	3307	2014-10-22
223	4U6F\|1\|5+ 4U6F\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-ray diffraction	3.1	3308	2014-10-22
224	4U4N\|1\|5+ 4U4N\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Edeine bound to the yeast 80S ribosome	X-ray diffraction	3.1	3308	2014-10-22
225	4U4N\|1\|1+ 4U4N\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Edeine bound to the yeast 80S ribosome	X-ray diffraction	3.1	3307	2014-10-22
226	4U4Z\|1\|5+ 4U4Z\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-ray diffraction	3.1	3308	2014-10-22
227	4U4Z\|1\|1+ 4U4Z\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-ray diffraction	3.1	3307	2014-10-22
228	4U3N\|1\|5+ 4U3N\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-ray diffraction	3.2	3308	2014-10-22
229	4U4Y\|1\|5+ 4U4Y\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-ray diffraction	3.2	3308	2014-10-22
230	4U3N\|1\|1+ 4U3N\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-ray diffraction	3.2	3307	2014-10-22
231	4U55\|1\|5+ 4U55\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-ray diffraction	3.2	3308	2014-10-22
232	4U4Y\|1\|1+ 4U4Y\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-ray diffraction	3.2	3307	2014-10-22
233	4U51\|1\|5+ 4U51\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-ray diffraction	3.2	3308	2014-10-22
234	4U51\|1\|1+ 4U51\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-ray diffraction	3.2	3307	2014-10-22
235	4U55\|1\|1+ 4U55\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-ray diffraction	3.2	3307	2014-10-22
236	4U50\|1\|5+ 4U50\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-ray diffraction	3.2	3308	2014-10-22
237	4U50\|1\|1+ 4U50\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-ray diffraction	3.2	3307	2014-10-22
238	4U53\|1\|1+ 4U53\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-ray diffraction	3.3	3307	2014-10-22
239	4U53\|1\|5+ 4U53\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-ray diffraction	3.3	3308	2014-10-22
240	4U56\|1\|1+ 4U56\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-ray diffraction	3.45	3307	2014-10-22
241	4U56\|1\|5+ 4U56\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-ray diffraction	3.45	3308	2014-10-22
242	4U4O\|1\|5+ 4U4O\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-ray diffraction	3.6	3308	2014-10-22
243	4U4O\|1\|1+ 4U4O\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-ray diffraction	3.6	3307	2014-10-22
244	8CDL\|1\|AA+ 8CDL\|1\|CC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	80S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complex	Electron microscopy	2.72	3348	2023-09-20
245	8CKU\|1\|AA+ 8CKU\|1\|CC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarin	Electron microscopy	3.11	3348	2023-09-20
246	9F58\|1\|a+ 9F58\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Gcn2 dimer bound to the 60S ribosomal subunit	Electron microscopy	3.1	3292	2025-03-26
247	5T62\|1\|A+ 5T62\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S Ribosomal RNA, 5.8S Ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 Complex	Electron microscopy	3.1	3362	2017-02-08
248	8CMJ\|1\|AA+ 8CMJ\|1\|CC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Translocation intermediate 4 (TI-4*) of 80S S. cerevisiae ribosome with eEF2 in the absence of sordarin	Electron microscopy	3.79	3355	2023-09-20
249	6QTZ\|1\|A+ 6QTZ\|1\|y	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.5	3302	2019-06-26

Release history

Release	4.24	4.25	4.26
Date	2026-01-28	2026-02-04	2026-02-11

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	6EM3\|1\|1	State A architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes	ELECTRON MICROSCOPY	3.2	1250
2	6OIG\|1\|5+ 6OIG\|1\|8	Subunit joining exposes nascent pre-40S rRNA for processing and quality control	ELECTRON MICROSCOPY	3.8	3401
3	6XIR\|1\|1+ 6XIR\|1\|4	Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative Stress	ELECTRON MICROSCOPY	3.2	3271
4	6QT0\|1\|A+ 6QT0\|1\|y	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.4	3320
5	5APO\|1\|5+ 5APO\|1\|8	Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1	ELECTRON MICROSCOPY	3.41	3270
6	5APN\|1\|5+ 5APN\|1\|8	Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1	ELECTRON MICROSCOPY	3.91	3270
7	6R84\|1\|1+ 6R84\|1\|4	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)	ELECTRON MICROSCOPY	3.6	3474
8	6R87\|1\|1+ 6R87\|1\|4	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)	ELECTRON MICROSCOPY	3.4	3474
9	8AGW\|1\|f+ 8AGW\|1\|i	Yeast RQC complex in state D	ELECTRON MICROSCOPY	2.6	3374
10	9OFV\|1\|f+ 9OFV\|1\|i	Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex	ELECTRON MICROSCOPY	3.16	3374
11	5M1J\|1\|14+ 5M1J\|1\|44	Nonstop ribosomal complex bound with Dom34 and Hbs1	ELECTRON MICROSCOPY	3.3	3453
12	8EVP\|1\|A1+ 8EVP\|1\|A4	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure I	ELECTRON MICROSCOPY	2.38	3356
13	8EWC\|1\|A1+ 8EWC\|1\|A4	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure II	ELECTRON MICROSCOPY	2.45	3356
14	8EVS\|1\|A1+ 8EVS\|1\|A4	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure II	ELECTRON MICROSCOPY	2.62	3356
15	8EVR\|1\|A1+ 8EVR\|1\|A4	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II	ELECTRON MICROSCOPY	2.87	3356
16	8EWB\|1\|A1+ 8EWB\|1\|A4	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure III	ELECTRON MICROSCOPY	2.87	3356
17	8EVQ\|1\|A1+ 8EVQ\|1\|A4	Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I	ELECTRON MICROSCOPY	2.72	3356
18	8EUB\|1\|A1+ 8EUB\|1\|A4	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure I	ELECTRON MICROSCOPY	2.52	3356
19	8T3D\|1\|A1+ 8T3D\|1\|A4	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure III	ELECTRON MICROSCOPY	2.95	3374
20	8T3B\|1\|A1+ 8T3B\|1\|A4	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure I	ELECTRON MICROSCOPY	3.08	3374
21	8T3C\|1\|A1+ 8T3C\|1\|A4	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II	ELECTRON MICROSCOPY	3.86	3374
22	5JUO\|1\|B+ 5JUO\|1\|C	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)	ELECTRON MICROSCOPY	4	3467
23	5JUP\|1\|B+ 5JUP\|1\|C	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)	ELECTRON MICROSCOPY	3.5	3467
24	5JUU\|1\|B+ 5JUU\|1\|C	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)	ELECTRON MICROSCOPY	4	3465
25	5JUT\|1\|B+ 5JUT\|1\|C	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)	ELECTRON MICROSCOPY	4	3467
26	8T3F\|1\|A1+ 8T3F\|1\|A4	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure V	ELECTRON MICROSCOPY	3.09	3374
27	8T3E\|1\|A1+ 8T3E\|1\|A4	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure IV	ELECTRON MICROSCOPY	3.04	3374
28	8T2Z\|1\|A1+ 8T2Z\|1\|A4	Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, POST	ELECTRON MICROSCOPY	2.4	3319
29	6WOO\|1\|5+ 6WOO\|1\|8	CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP	ELECTRON MICROSCOPY	2.9	3428
30	6Z6K\|1\|C1+ 6Z6K\|1\|C3	Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomes	ELECTRON MICROSCOPY	3.4	3284
31	6Z6J\|1\|C1+ 6Z6J\|1\|C3	Cryo-EM structure of yeast Lso2 bound to 80S ribosomes under native condition	ELECTRON MICROSCOPY	3.4	3284
32	5NDW\|1\|5+ 5NDW\|1\|8	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	3238
33	5NDG\|1\|5+ 5NDG\|1\|8	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	3284
34	6T83\|1\|Aa+ 6T83\|1\|Ca	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	ELECTRON MICROSCOPY	4	3284
35	6SV4\|1\|BQ+ 6SV4\|1\|BS	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	3284
36	6SV4\|1\|YQ+ 6SV4\|1\|YS	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	3284
37	6SV4\|1\|ZQ+ 6SV4\|1\|ZS	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	3284
38	5OBM\|1\|5+ 5OBM\|1\|8	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.4	3292
39	5DAT\|1\|5+ 5DAT\|1\|8	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-RAY DIFFRACTION	3.15	3327
40	5DGF\|1\|5+ 5DGF\|1\|8	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.3	3327
41	5DC3\|1\|5+ 5DC3\|1\|8	Complex of yeast 80S ribosome with non-modified eIF5A	X-RAY DIFFRACTION	3.25	3327
42	5DGE\|1\|5+ 5DGE\|1\|8	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-RAY DIFFRACTION	3.45	3308
43	5DGV\|1\|5+ 5DGV\|1\|8	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.1	3307
44	5TGM\|1\|5+ 5TGM\|1\|8	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.5	3308
45	5TGA\|1\|5+ 5TGA\|1\|8	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.3	3308
46	5LYB\|1\|5+ 5LYB\|1\|8	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	3308
47	5I4L\|1\|5+ 5I4L\|1\|8	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3308
48	4U4N\|1\|5+ 4U4N\|1\|8	Crystal structure of Edeine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3308
49	4U55\|1\|5+ 4U55\|1\|8	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3308
50	4U4Z\|1\|5+ 4U4Z\|1\|8	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3308
51	4U3N\|1\|5+ 4U3N\|1\|8	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3308
52	4V88\|1\|A5+ 4V88\|1\|A8	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-RAY DIFFRACTION	3	3308
53	4U4R\|1\|5+ 4U4R\|1\|8	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.8	3308
54	4U3U\|1\|5+ 4U3U\|1\|8	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.9	3308
55	4U4Y\|1\|5+ 4U4Y\|1\|8	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3308
56	4U3M\|1\|5+ 4U3M\|1\|8	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3308
57	4U4Q\|1\|5+ 4U4Q\|1\|8	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3308
58	4U4U\|1\|5+ 4U4U\|1\|8	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3308
59	4U51\|1\|5+ 4U51\|1\|8	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3308
60	4U6F\|1\|5+ 4U6F\|1\|8	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3308
61	4U52\|1\|5+ 4U52\|1\|8	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3308
62	4U50\|1\|5+ 4U50\|1\|8	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3308
63	4U53\|1\|5+ 4U53\|1\|8	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	3308
64	4U56\|1\|5+ 4U56\|1\|8	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.45	3308
65	5FCI\|1\|5+ 5FCI\|1\|8	Structure of the vacant uL3 W255C mutant 80S yeast ribosome	X-RAY DIFFRACTION	3.4	3308
66	5FCJ\|1\|5+ 5FCJ\|1\|8	Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome	X-RAY DIFFRACTION	3.1	3308
67	4U4O\|1\|5+ 4U4O\|1\|8	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.6	3308
68	5TBW\|1\|AR+ 5TBW\|1\|AT	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3307
69	5MEI\|1\|AR+ 5MEI\|1\|AT	Crystal structure of Agelastatin A bound to the 80S ribosome	X-RAY DIFFRACTION	3.5	3307
70	5ON6\|1\|AR+ 5ON6\|1\|AT	Crystal structure of haemanthamine bound to the 80S ribosome	X-RAY DIFFRACTION	3.1	3307
71	6HHQ\|1\|AR+ 6HHQ\|1\|AT	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3305
72	8P9A\|1\|AR+ 8P9A\|1\|AT	80S yeast ribosome in complex with Methyllissoclimide	X-RAY DIFFRACTION	2.9	3288
73	8P85\|1\|AR+ 8P85\|1\|AT	80S yeast ribosome in complex with Fluorolissoclimide	X-RAY DIFFRACTION	2.9	3305
74	8P4V\|1\|AR+ 8P4V\|1\|AT	80S yeast ribosome in complex with HaterumaimideQ	X-RAY DIFFRACTION	3.16	3305
75	8PNN\|1\|AR+ 8PNN\|1\|AT	80S yeast ribosome in complex with Bromolissoclimide	X-RAY DIFFRACTION	2.9	3294
76	5NDV\|1\|5+ 5NDV\|1\|8	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	3245
77	6R86\|1\|1+ 6R86\|1\|4	Yeast Vms1-60S ribosomal subunit complex (post-state)	ELECTRON MICROSCOPY	3.4	3418
78	7ZS5\|1\|1+ 7ZS5\|1\|4	Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA	ELECTRON MICROSCOPY	3.2	3406
79	7B7D\|1\|LA+ 7B7D\|1\|LC	Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs	ELECTRON MICROSCOPY	3.3	3381
80	5NDW\|1\|1+ 5NDW\|1\|4	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	3248
81	5NDG\|1\|1+ 5NDG\|1\|4	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	3236
82	5OBM\|1\|1+ 5OBM\|1\|4	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.4	3256
83	4U4O\|1\|1+ 4U4O\|1\|4	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.6	3307
84	5FCI\|1\|1+ 5FCI\|1\|4	Structure of the vacant uL3 W255C mutant 80S yeast ribosome	X-RAY DIFFRACTION	3.4	3307
85	5TGM\|1\|1+ 5TGM\|1\|4	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.5	3307
86	5DGV\|1\|1+ 5DGV\|1\|4	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.1	3306
87	5DGE\|1\|1+ 5DGE\|1\|4	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-RAY DIFFRACTION	3.45	3307
88	5DC3\|1\|1+ 5DC3\|1\|4	Complex of yeast 80S ribosome with non-modified eIF5A	X-RAY DIFFRACTION	3.25	3307
89	5TBW\|1\|1+ 5TBW\|1\|4	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3307
90	4U4Y\|1\|1+ 4U4Y\|1\|4	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3307
91	4U3M\|1\|1+ 4U3M\|1\|4	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3307
92	5LYB\|1\|1+ 5LYB\|1\|4	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	3307
93	4V88\|1\|A1+ 4V88\|1\|A4	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-RAY DIFFRACTION	3	3307
94	4U4R\|1\|1+ 4U4R\|1\|4	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.8	3307
95	4U3U\|1\|1+ 4U3U\|1\|4	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.9	3307
96	4U3N\|1\|1+ 4U3N\|1\|4	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3307
97	4U6F\|1\|1+ 4U6F\|1\|4	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3307
98	4U4Q\|1\|1+ 4U4Q\|1\|4	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3307
99	4U4U\|1\|1+ 4U4U\|1\|4	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3307
100	4U51\|1\|1+ 4U51\|1\|4	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3307
101	5I4L\|1\|1+ 5I4L\|1\|4	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3307
102	4U4N\|1\|1+ 4U4N\|1\|4	Crystal structure of Edeine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3307
103	4U55\|1\|1+ 4U55\|1\|4	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3307
104	4U4Z\|1\|1+ 4U4Z\|1\|4	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3307
105	4U52\|1\|1+ 4U52\|1\|4	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3307
106	4U50\|1\|1+ 4U50\|1\|4	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3307
107	4U53\|1\|1+ 4U53\|1\|4	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	3307
108	5TGA\|1\|1+ 5TGA\|1\|4	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.3	3307
109	5FCJ\|1\|1+ 5FCJ\|1\|4	Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome	X-RAY DIFFRACTION	3.1	3307
110	4U56\|1\|1+ 4U56\|1\|4	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.45	3307
111	5MEI\|1\|1+ 5MEI\|1\|4	Crystal structure of Agelastatin A bound to the 80S ribosome	X-RAY DIFFRACTION	3.5	3307
112	5ON6\|1\|1+ 5ON6\|1\|4	Crystal structure of haemanthamine bound to the 80S ribosome	X-RAY DIFFRACTION	3.1	3307
113	6HHQ\|1\|1+ 6HHQ\|1\|4	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3307
114	8P9A\|1\|1+ 8P9A\|1\|4	80S yeast ribosome in complex with Methyllissoclimide	X-RAY DIFFRACTION	2.9	3307
115	8P85\|1\|1+ 8P85\|1\|4	80S yeast ribosome in complex with Fluorolissoclimide	X-RAY DIFFRACTION	2.9	3292
116	5DAT\|1\|1+ 5DAT\|1\|4	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-RAY DIFFRACTION	3.15	3307
117	5DGF\|1\|1+ 5DGF\|1\|4	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.3	3307
118	8PNN\|1\|1+ 8PNN\|1\|4	80S yeast ribosome in complex with Bromolissoclimide	X-RAY DIFFRACTION	2.9	3307
119	8P4V\|1\|1+ 8P4V\|1\|4	80S yeast ribosome in complex with HaterumaimideQ	X-RAY DIFFRACTION	3.16	3307
120	6S47\|1\|AA+ 6S47\|1\|AC	Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1	ELECTRON MICROSCOPY	3.28	3307
121	8K82\|1\|C1+ 8K82\|1\|C3	Cryo-EM structure of the yeast 80S ribosome with tigecycline, Not5 and P-site tRNA	ELECTRON MICROSCOPY	3	3362
122	6TB3\|1\|BQ+ 6TB3\|1\|BS	yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complex	ELECTRON MICROSCOPY	2.8	3381
123	6SNT\|1\|1+ 6SNT\|1\|3	Yeast 80S ribosome stalled on SDD1 mRNA.	ELECTRON MICROSCOPY	2.8	3342
124	6T4Q\|1\|C1+ 6T4Q\|1\|C3	Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.	ELECTRON MICROSCOPY	2.6	3342
125	6T7T\|1\|C1+ 6T7T\|1\|C3	Structure of yeast 80S ribosome stalled on poly(A) tract.	ELECTRON MICROSCOPY	3.1	3342
126	6T7I\|1\|C1+ 6T7I\|1\|C3	Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.	ELECTRON MICROSCOPY	3.2	3342
127	6T83\|1\|1b+ 6T83\|1\|3b	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	ELECTRON MICROSCOPY	4	3342
128	9F9S\|1\|L1+ 9F9S\|1\|L2	Yeast SDD1 Disome with Mbf1	ELECTRON MICROSCOPY	2.9	3274
129	7ZPQ\|1\|5+ 7ZPQ\|1\|3	Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)	ELECTRON MICROSCOPY	3.47	3342
130	8BJQ\|1\|1+ 8BJQ\|1\|C3	Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex	ELECTRON MICROSCOPY	3.8	3459
131	8BIP\|1\|1+ 8BIP\|1\|C3	Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex	ELECTRON MICROSCOPY	3.1	3459
132	7ZUX\|1\|5+ 7ZUX\|1\|3	Collided ribosome in a disome unit from S. cerevisiae	ELECTRON MICROSCOPY	2.5	3321
133	5NDV\|1\|1+ 5NDV\|1\|4	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	3235
134	8AGV\|1\|f+ 8AGV\|1\|i	Yeast RQC complex in state H	ELECTRON MICROSCOPY	2.6	3374
135	8AGU\|1\|f+ 8AGU\|1\|i	Yeast RQC complex in state E	ELECTRON MICROSCOPY	2.7	3374
136	8AAF\|1\|f+ 8AAF\|1\|i	Yeast RQC complex in state G	ELECTRON MICROSCOPY	2.5	3374
137	8AGT\|1\|f+ 8AGT\|1\|i	Yeast RQC complex in state F	ELECTRON MICROSCOPY	2.6	3374
138	8AGZ\|1\|f+ 8AGZ\|1\|i	Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position	ELECTRON MICROSCOPY	2.6	3374
139	8AGX\|1\|f+ 8AGX\|1\|i	Yeast RQC complex in state with the RING domain of Ltn1 in the IN position	ELECTRON MICROSCOPY	2.4	3374
140	9R9P\|1\|C1+ 9R9P\|1\|C3	Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state	ELECTRON MICROSCOPY	3	3221
141	9R9O\|1\|C1+ 9R9O\|1\|C3	Yeast 80S with nascent chain in complex with Ssb1-ADP in the S1 state	ELECTRON MICROSCOPY	2.9	3221
142	8Y0U\|1\|C1+ 8Y0U\|1\|C3	dormant ribosome with STM1	ELECTRON MICROSCOPY	3.59	3379
143	7RR5\|1\|C1+ 7RR5\|1\|C3	Structure of ribosomal complex bound with Rbg1/Tma46	ELECTRON MICROSCOPY	3.23	3379
144	8P8M\|1\|A+ 8P8M\|1\|LD	Yeast 60S ribosomal subunit, RPL39 deletion	ELECTRON MICROSCOPY	2.66	3193
145	8PFR\|1\|A+ 8PFR\|1\|LD	Mouse RPL39L integrated into the yeast 60S ribosomal subunit	ELECTRON MICROSCOPY	2.15	3196
146	8P8N\|1\|A+ 8P8N\|1\|LD	Mouse RPL39 integrated into the yeast 60S ribosomal subunit	ELECTRON MICROSCOPY	2.15	3200
147	8P8U\|1\|A+ 8P8U\|1\|LD	Yeast 60S ribosomal subunit	ELECTRON MICROSCOPY	2.23	3203
148	7TOO\|1\|A25S+ 7TOO\|1\|A58S	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	ELECTRON MICROSCOPY	2.7	3352
149	7TOP\|1\|A25S+ 7TOP\|1\|A58S	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20	ELECTRON MICROSCOPY	2.4	3352
150	9F58\|1\|a+ 9F58\|1\|4	Gcn2 dimer bound to the 60S ribosomal subunit	ELECTRON MICROSCOPY	3.1	3292
151	5H4P\|1\|1+ 5H4P\|1\|4	Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1	ELECTRON MICROSCOPY	3.07	3249
152	6HD7\|1\|1+ 6HD7\|1\|4	Cryo-EM structure of the ribosome-NatA complex	ELECTRON MICROSCOPY	3.4	3493
153	5GAK\|1\|1+ 5GAK\|1\|4	Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5A	ELECTRON MICROSCOPY	3.88	3323
154	8BN3\|1\|1+ 8BN3\|1\|4	Yeast 80S, ES7s delta, eIF5A, Stm1 containing	ELECTRON MICROSCOPY	2.4	3301
155	7ZW0\|1\|LA+ 7ZW0\|1\|LD	FAP-80S Complex - Rotated state	ELECTRON MICROSCOPY	2.4	3375
156	8ZGY\|1\|LA+ 8ZGY\|1\|LC	80S ribosome with P/E tRNA and mRNA of WNV	ELECTRON MICROSCOPY	2.8	3342
157	5MC6\|1\|BQ+ 5MC6\|1\|BS	Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae	ELECTRON MICROSCOPY	3.8	3323
158	6Q8Y\|1\|BQ+ 6Q8Y\|1\|BS	Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complex	ELECTRON MICROSCOPY	3.1	3319
159	7AZY\|1\|E+ 7AZY\|1\|G	Context-specific inhibition of eukaryotic translation by macrolide antibiotics	ELECTRON MICROSCOPY	2.877	3319
160	8BQX\|1\|BQ+ 8BQX\|1\|BS	Yeast 80S ribosome in complex with Map1 (conformation 2)	ELECTRON MICROSCOPY	3.8	3459
161	6TNU\|1\|BQ+ 6TNU\|1\|BS	Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.	ELECTRON MICROSCOPY	3.1	3342
162	8BQD\|1\|BQ+ 8BQD\|1\|BS	Yeast 80S ribosome in complex with Map1 (conformation 1)	ELECTRON MICROSCOPY	3.9	3457
163	7NRC\|1\|LA+ 7NRC\|1\|LC	Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A	ELECTRON MICROSCOPY	3.9	3342
164	8UT0\|1\|A+ 8UT0\|1\|C	Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA	ELECTRON MICROSCOPY	3.22	3342
165	8UTI\|1\|A+ 8UTI\|1\|C	Eukaryotic 80S ribosome with Reh1 and A/P site tRNA	ELECTRON MICROSCOPY	3.13	3202
166	8EVT\|1\|A1+ 8EVT\|1\|A4	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) refined against a composite map	ELECTRON MICROSCOPY	2.2	3350
167	7N8B\|1\|A1+ 7N8B\|1\|A4	Cycloheximide bound vacant 80S structure isolated from cbf5-D95A	ELECTRON MICROSCOPY	3.05	3314
168	7MPI\|1\|A1+ 7MPI\|1\|A4	Stm1 bound vacant 80S structure isolated from cbf5-D95A	ELECTRON MICROSCOPY	3.05	3295
169	7MPJ\|1\|A1+ 7MPJ\|1\|A4	Stm1 bound vacant 80S structure isolated from nop1-D243A	ELECTRON MICROSCOPY	2.7	3295
170	8ZH3\|1\|LA+ 8ZH3\|1\|LC	80S ribosome with A/P-P/E tRNA and mRNA of WNV	ELECTRON MICROSCOPY	2.7	3342
171	8ZHB\|1\|LA+ 8ZHB\|1\|LC	80S ribosome with A/A P/E tRNA and mRNA of WNV	ELECTRON MICROSCOPY	2.6	3342
172	8ZGR\|1\|LA+ 8ZGR\|1\|LC	80S ribosome with A/A tRNA and mRNA of WNV	ELECTRON MICROSCOPY	2.7	3342
173	8ZHC\|1\|LA+ 8ZHC\|1\|LC	pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV	ELECTRON MICROSCOPY	2.3	3342
174	8T3A\|1\|A1+ 8T3A\|1\|A4	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, sordarin, and hibernating factor Los2	ELECTRON MICROSCOPY	2.86	3372
175	8CMJ\|1\|AA+ 8CMJ\|1\|CC	Translocation intermediate 4 (TI-4*) of 80S S. cerevisiae ribosome with eEF2 in the absence of sordarin	ELECTRON MICROSCOPY	3.79	3355
176	8CG8\|1\|AA+ 8CG8\|1\|CC	Translocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	ELECTRON MICROSCOPY	2.57	3355
177	8CDR\|1\|AA+ 8CDR\|1\|CC	Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	ELECTRON MICROSCOPY	2.04	3355
178	8CEH\|1\|AA+ 8CEH\|1\|CC	Translocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	ELECTRON MICROSCOPY	2.05	3355
179	8CIV\|1\|AA+ 8CIV\|1\|CC	Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	ELECTRON MICROSCOPY	2.47	3355
180	8CGN\|1\|AA+ 8CGN\|1\|CC	Non-rotated 80S S. cerevisiae ribosome with ligands	ELECTRON MICROSCOPY	2.28	3355
181	8T30\|1\|A1+ 8T30\|1\|A4	Hypomethylated yeast 80S bound with cycloheximide, unmodified U2921, mid rotated	ELECTRON MICROSCOPY	2.88	3317
182	8T2Y\|1\|A1+ 8T2Y\|1\|A4	Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, PRE	ELECTRON MICROSCOPY	2.2	3317
183	8T2X\|1\|A1+ 8T2X\|1\|A4	Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, A-site tRNA, messenger RNA and eIF5A, PRE	ELECTRON MICROSCOPY	2.46	3374
184	8K2D\|1\|C1+ 8K2D\|1\|C3	Cryo-EM structure of the yeast 80S ribosome with tigecycline, eEF2, Stm1 and eIF5A	ELECTRON MICROSCOPY	3.2	3345
185	8CKU\|1\|AA+ 8CKU\|1\|CC	Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarin	ELECTRON MICROSCOPY	3.11	3348
186	8CF5\|1\|AA+ 8CF5\|1\|CC	Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	ELECTRON MICROSCOPY	2.71	3348
187	8CCS\|1\|AA+ 8CCS\|1\|CC	80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex	ELECTRON MICROSCOPY	1.97	3348
188	8CDL\|1\|AA+ 8CDL\|1\|CC	80S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complex	ELECTRON MICROSCOPY	2.72	3348
189	9F9S\|1\|M1+ 9F9S\|1\|M2	Yeast SDD1 Disome with Mbf1	ELECTRON MICROSCOPY	2.9	3348
190	8XU8\|1\|A+ 8XU8\|1\|C	State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation	ELECTRON MICROSCOPY	3.4	3347
191	7OSA\|1\|25S+ 7OSA\|1\|58S	Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-RAY DIFFRACTION	3	3338
192	7OSM\|1\|25S+ 7OSM\|1\|58S	Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-RAY DIFFRACTION	3	3320
193	8YLD\|1\|A+ 8YLD\|1\|C	State 4a (S4a) of yeast 80S ribosome bound to 2 tRNAs and open eEF3 and eEF2 during translocation	ELECTRON MICROSCOPY	3.9	3351
194	8YLR\|1\|A+ 8YLR\|1\|C	State 6 (S6) of yeast 80S ribosome bound to 2 tRNAs and eEF2 and eEF3 during tranlocation	ELECTRON MICROSCOPY	3.9	3350
195	8Z71\|1\|A+ 8Z71\|1\|C	State 1a (S1a) of yeast 80S ribosome bound to open eEF3 and 2 tRNAs and eEF1A during mRNA decoding	ELECTRON MICROSCOPY	3.6	3345
196	8Z70\|1\|A+ 8Z70\|1\|C	State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs during mRNA decoding	ELECTRON MICROSCOPY	3.2	3345
197	6GQV\|1\|1+ 6GQV\|1\|4	Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)	ELECTRON MICROSCOPY	4	3381
198	6GQB\|1\|1+ 6GQB\|1\|4	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)	ELECTRON MICROSCOPY	3.9	3381
199	5T62\|1\|A+ 5T62\|1\|C	Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 Complex	ELECTRON MICROSCOPY	3.1	3362
200	6N8O\|1\|A+ 6N8O\|1\|C	Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.5	3359
201	6QTZ\|1\|A+ 6QTZ\|1\|y	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.5	3302
202	6RI5\|1\|A+ 6RI5\|1\|y	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.3	3303
203	4V7R\|1\|B1+ 4V7R\|1\|B3	Yeast 80S ribosome.	X-RAY DIFFRACTION	4	3364
204	4V7R\|1\|D1+ 4V7R\|1\|D3	Yeast 80S ribosome.	X-RAY DIFFRACTION	4	3364
205	6RZZ\|1\|A+ 6RZZ\|1\|y	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.2	3302
206	6QIK\|1\|A+ 6QIK\|1\|y	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.1	3302
207	6S05\|1\|A+ 6S05\|1\|y	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.9	3302
208	6N8N\|1\|A+ 6N8N\|1\|C	Cryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.8	3361
209	6N8M\|1\|A+ 6N8M\|1\|C	Cryo-EM structure of pre-Lsg1 (PL) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.5	3361
210	6N8L\|1\|1+ 6N8L\|1\|3	Cryo-EM structure of early cytoplasmic-late (ECL) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.6	3358
211	7Z34\|1\|1+ 7Z34\|1\|3	Structure of pre-60S particle bound to DRG1(AFG2)	ELECTRON MICROSCOPY	3.8	3504
212	6N8K\|1\|1+ 6N8K\|1\|3	Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.6	3358
213	8HFR\|1\|1e+ 8HFR\|1\|3n	NPC-trapped pre-60S particle	ELECTRON MICROSCOPY	2.64	3430
214	7OF1\|1\|1+ 7OF1\|1\|2	Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae	ELECTRON MICROSCOPY	3.1	2945
215	6N8J\|1\|1+ 6N8J\|1\|3	Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.5	3205
216	6YLY\|1\|1+ 6YLY\|1\|3	pre-60S State NE2 (TAP-Flag-Nop53)	ELECTRON MICROSCOPY	3.8	2834
217	6YLH\|1\|1+ 6YLH\|1\|2	Rix1-Rea1 pre-60S particle - full composite structure	ELECTRON MICROSCOPY	3.1	3193
218	6YLG\|1\|1+ 6YLG\|1\|2	Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)	ELECTRON MICROSCOPY	3	3193
219	6YLX\|1\|1+ 6YLX\|1\|2	pre-60S State NE1 (TAP-Flag-Nop53)	ELECTRON MICROSCOPY	3.9	2692
220	7U0H\|1\|1+ 7U0H\|1\|2	State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model	ELECTRON MICROSCOPY	2.76	2880
221	7UQZ\|1\|1+ 7UQZ\|1\|2	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strain	ELECTRON MICROSCOPY	2.44	3144
222	7V08\|1\|1+ 7V08\|1\|2	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strain	ELECTRON MICROSCOPY	2.36	3144
223	7UQB\|1\|1+ 7UQB\|1\|2	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1-D52A strain with AlF4	ELECTRON MICROSCOPY	2.43	3149
224	7UOO\|1\|1+ 7UOO\|1\|2	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state	ELECTRON MICROSCOPY	2.34	3149
225	7BTB\|1\|1+ 7BTB\|1\|2	Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)	ELECTRON MICROSCOPY	3.22	3216
226	7UG6\|1\|1+ 7UG6\|1\|2	Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922	ELECTRON MICROSCOPY	2.9	3216
227	7OH3\|1\|1+ 7OH3\|1\|2	Nog1-TAP associated immature ribosomal particle population B from S. cerevisiae	ELECTRON MICROSCOPY	3.4	3168
228	7OHQ\|1\|1+ 7OHQ\|1\|2	Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae	ELECTRON MICROSCOPY	3.1	3211
229	3JCT\|1\|1+ 3JCT\|1\|2	Cryo-em structure of eukaryotic pre-60S ribosomal subunits	ELECTRON MICROSCOPY	3.08	3216
230	6FT6\|1\|1+ 6FT6\|1\|2	Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors	ELECTRON MICROSCOPY	3.9	3220
231	6M62\|1\|1+ 6M62\|1\|2	Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.	ELECTRON MICROSCOPY	3.2	3130
232	7BT6\|1\|1+ 7BT6\|1\|2	Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)	ELECTRON MICROSCOPY	3.12	3120
233	7OHY\|1\|1+ 7OHY\|1\|2	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population B	ELECTRON MICROSCOPY	3.9	1837
234	7OHU\|1\|1+ 7OHU\|1\|2	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population B	ELECTRON MICROSCOPY	3.7	1840
235	7OHP\|1\|1+ 7OHP\|1\|2	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population A	ELECTRON MICROSCOPY	3.9	1716
236	6ELZ\|1\|1+ 6ELZ\|1\|2	State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmes	ELECTRON MICROSCOPY	3.3	2615
237	7OHV\|1\|1+ 7OHV\|1\|2	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population C	ELECTRON MICROSCOPY	3.9	2296
238	7NAC\|1\|1+ 7NAC\|1\|2	State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model	ELECTRON MICROSCOPY	3.04	2819
239	7R7A\|1\|1+ 7R7A\|1\|2	State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model	ELECTRON MICROSCOPY	3.04	2729
240	8V87\|1\|1+ 8V87\|1\|2	60S ribosome biogenesis intermediate (Dbp10 post-catalytic structure - Overall map)	ELECTRON MICROSCOPY	2.66	2644
241	5Z3G\|1\|A+ 5Z3G\|1\|B	Cryo-EM structure of a nucleolar pre-60S ribosome (Rpf1-TAP)	ELECTRON MICROSCOPY	3.65	1657
242	6EM1\|1\|1+ 6EM1\|1\|2	State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes	ELECTRON MICROSCOPY	3.6	1943
243	7OHW\|1\|1+ 7OHW\|1\|2	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population B	ELECTRON MICROSCOPY	3.5	1788
244	7OHX\|1\|1+ 7OHX\|1\|2	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population A	ELECTRON MICROSCOPY	3.3	1709
245	8V83\|1\|1+ 8V83\|1\|2	60S ribosome biogenesis intermediate (Dbp10 pre-catalytic structure - Overall map)	ELECTRON MICROSCOPY	2.53	2165
246	8V84\|1\|1+ 8V84\|1\|2	60S ribosome biogenesis intermediate (Dbp10 catalytic structure - Overall map)	ELECTRON MICROSCOPY	2.7	2120
247	6C0F\|1\|1+ 6C0F\|1\|2	Yeast nucleolar pre-60S ribosomal subunit (state 2)	ELECTRON MICROSCOPY	3.7	1515
248	9QJC\|1\|1	Yeast pre-60S Domain II intermediate	ELECTRON MICROSCOPY	3.2	509
249	8E5T\|1\|1+ 8E5T\|1\|2	Yeast co-transcriptional Noc1-Noc2 RNP assembly checkpoint intermediate	ELECTRON MICROSCOPY	4	881

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_4.0_90506.83 Current

Release history

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