Equivalence class NR_4.0_97014.2 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4V97|1|CX (rep) | mRNA | Crystal structure of the bacterial ribosome ram mutation G299A. | X-ray diffraction | 3.52 | 10 | 2014-07-09 | ||||
| 2 | 4L71|1|XX | A-site ASL SufA6 | synthetic construct | Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome | X-ray diffraction | 3.9 | 8 | 2014-08-06 | |||
| 3 | 5D8B|1|HD | mRNA | synthetic construct | Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch | X-ray diffraction | 3.63 | 8 | 2015-10-14 | |||
| 4 | 5D8B|1|GD | mRNA | synthetic construct | Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch | X-ray diffraction | 3.63 | 8 | 2015-10-14 | |||
| 5 | 4L71|1|QX | A-site ASL SufA6 | synthetic construct | Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome | X-ray diffraction | 3.9 | 8 | 2014-08-06 | |||
| 6 | 4V5K|1|AX | MRNA | synthetic construct | Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome | X-ray diffraction | 3.2 | 16 | 2014-07-09 | |||
| 7 | 4V8X|1|AX | 5'-R(*GP*GP*CP*AP*AP*GP*GP*AP*GP*GP*UP*AP*AP*AP *AP*AP*UP*G U2M A2M A2MP*AP*AP*AP*A)-3' | synthetic construct | Structure of Thermus thermophilus ribosome | X-ray diffraction | 3.35 | 11 | 2014-07-09 | |||
| 8 | 6NDK|1|XX | mRNA | Escherichia coli | Structure of ASLSufA6 A37.5 bound to the 70S A site | X-ray diffraction | 3.64 | 11 | 2019-02-27 | |||
| 9 | 6NDK|1|QX | mRNA | Escherichia coli | Structure of ASLSufA6 A37.5 bound to the 70S A site | X-ray diffraction | 3.64 | 8 | 2019-02-27 | |||
| 10 | 7MSH|1|z | mRNA | Mycobacterium tuberculosis H37Rv | Mtb 70SIC in complex with MtbEttA at Pre_R1 state | Electron microscopy | 3.23 | 6 | 2022-02-02 | |||
| 11 | 6BZ8|1|XX | messenger RNA | Escherichia coli | Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site | X-ray diffraction | 3.74 | 11 | 2018-11-14 |
Release history
| Release | 3.382 |
|---|---|
| Date | 2025-04-09 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 6NDK|1|QX | Structure of ASLSufA6 A37.5 bound to the 70S A site | X-RAY DIFFRACTION | 3.64 | 8 | |
| 2 | 6NDK|1|XX | Structure of ASLSufA6 A37.5 bound to the 70S A site | X-RAY DIFFRACTION | 3.64 | 11 | |
| 3 | 4L71|1|QX | Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome | X-RAY DIFFRACTION | 3.9 | 8 | |
| 4 | 4L71|1|XX | Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome | X-RAY DIFFRACTION | 3.9 | 8 | |
| 5 | 4V5K|1|AX | Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome | X-RAY DIFFRACTION | 3.2 | 16 | |
| 6 | 4V97|1|CX | Crystal structure of the bacterial ribosome ram mutation G299A. | X-RAY DIFFRACTION | 3.52 | 10 | |
| 7 | 6BZ8|1|XX | Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site | X-RAY DIFFRACTION | 3.74 | 11 | |
| 8 | 4V8X|1|AX | Structure of Thermus thermophilus ribosome | X-RAY DIFFRACTION | 3.35 | 11 | |
| 9 | 5D8B|1|HD | Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch | X-RAY DIFFRACTION | 3.63 | 8 | |
| 10 | 5D8B|1|GD | Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch | X-RAY DIFFRACTION | 3.63 | 8 | |
| 11 | 7MSH|1|z | Mtb 70SIC in complex with MtbEttA at Pre_R1 state | ELECTRON MICROSCOPY | 3.23 | 6 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: