NR_all_03510.30

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	4V88\|1\|A6 (rep)	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-ray diffraction	3	2014-07-09
2	5TBW\|1\|sR	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-ray diffraction	3	2017-07-26
3	4V88\|1\|A2	Small subunit ribosomal RNA	18S RIBOSOMAL RNA	Saccharomyces cerevisiae	Eukarya	RF01960	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-ray diffraction	3	2014-07-09
4	5TBW\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-ray diffraction	3	2017-07-26
5	6HHQ\|1\|sR	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-ray diffraction	3.1	2019-02-20
6	5OBM\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-ray diffraction	3.4	2017-12-13
7	5I4L\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-ray diffraction	3.1	2016-06-22
8	5MEI\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Agelastatin A bound to the 80S ribosome	X-ray diffraction	3.5	2017-06-28
9	5NDW\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-ray diffraction	3.7	2017-12-13
10	5LYB\|1\|6	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-ray diffraction	3.25	2016-11-23
11	5I4L\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-ray diffraction	3.1	2016-06-22
12	5MEI\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Agelastatin A bound to the 80S ribosome	X-ray diffraction	3.5	2017-06-28
13	5OBM\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-ray diffraction	3.4	2017-12-13
14	5ON6\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of haemanthamine bound to the 80S ribosome	X-ray diffraction	3.1	2018-02-28
15	6HHQ\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-ray diffraction	3.1	2019-02-20
16	5NDW\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-ray diffraction	3.7	2017-12-13
17	5LYB\|1\|2	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-ray diffraction	3.25	2016-11-23
18	5ON6\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of haemanthamine bound to the 80S ribosome	X-ray diffraction	3.1	2018-02-28
19	5NDV\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-ray diffraction	3.3	2017-12-13
20	5NDV\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-ray diffraction	3.3	2017-12-13
21	5NDG\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-ray diffraction	3.7	2017-12-13
22	5NDG\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-ray diffraction	3.7	2017-12-13
23	5TGM\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.5	2017-01-18
24	5TGM\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.5	2017-01-18
25	4V7R\|1\|A1	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Yeast 80S ribosome.	X-ray diffraction	4	2014-07-09
26	4V7R\|1\|C1	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Yeast 80S ribosome.	X-ray diffraction	4	2014-07-09
27	5DAT\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-ray diffraction	3.15	2016-08-31
28	5TGA\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.3	2016-11-23
29	5DGE\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-ray diffraction	3.45	2017-01-25
30	5DGV\|1\|6	Small subunit ribosomal RNA	Saccharomyces cerevisiae S288c RDN37-1 miscRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.1	2016-12-14
31	5DGF\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.3	2016-12-14
32	5DC3\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with non-modified eIF5A	X-ray diffraction	3.25	2016-06-01
33	5DAT\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-ray diffraction	3.15	2016-08-31
34	5TGA\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.3	2016-11-23
35	5DGV\|1\|2	Small subunit ribosomal RNA	Saccharomyces cerevisiae S288c RDN37-1 miscRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.1	2016-12-14
36	5DGE\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-ray diffraction	3.45	2017-01-25
37	5DGF\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.3	2016-12-14
38	5DC3\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with non-modified eIF5A	X-ray diffraction	3.25	2016-06-01
39	6T4Q\|1\|C2	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.	Electron microscopy	2.6	2019-12-25
40	4U4R\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-ray diffraction	2.8	2014-10-22
41	6TB3\|1\|2	Small subunit ribosomal RNA	Saccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1), rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complex	Electron microscopy	2.8	2020-04-22
42	6SNT\|1\|2	Small subunit ribosomal RNA	Saccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1), rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Yeast 80S ribosome stalled on SDD1 mRNA.	Electron microscopy	2.8	2020-03-04
43	4U3U\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-ray diffraction	2.9	2014-10-22
44	4U4R\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-ray diffraction	2.8	2014-10-22
45	4U3U\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-ray diffraction	2.9	2014-10-22
46	4U3M\|1\|6	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
47	4U4Q\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
48	4U4U\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
49	4U52\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
50	4U3M\|1\|2	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
51	4U6F\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
52	4U4N\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Edeine bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
53	4U52\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
54	4U4U\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
55	4U4Q\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
56	6Q8Y\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complex	Electron microscopy	3.1	2019-03-13
57	4U4Z\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
58	4U6F\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
59	4U4Y\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
60	4U3N\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
61	6SV4\|1\|2b	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	The cryo-EM structure of SDD1-stalled collided trisome.	Electron microscopy	3.3	2020-03-04
62	6SV4\|1\|2c	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	The cryo-EM structure of SDD1-stalled collided trisome.	Electron microscopy	3.3	2020-03-04
63	4U55\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
64	6T7T\|1\|C2	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Structure of yeast 80S ribosome stalled on poly(A) tract.	Electron microscopy	3.1	2019-12-25
65	5M1J\|1\|22	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Nonstop ribosomal complex bound with Dom34 and Hbs1	Electron microscopy	3.3	2017-01-18
66	4U4Z\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
67	4U4N\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Edeine bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
68	4U50\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
69	4U51\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
70	6T7I\|1\|C2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.	Electron microscopy	3.2	2019-12-25
71	4U3N\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
72	4U4Y\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
73	4U51\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
74	6TNU\|1\|2	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.	Electron microscopy	3.1	2020-04-22
75	4U55\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
76	6S47\|1\|BA	Small subunit ribosomal RNA	18S rRNA (1707-MER)	Saccharomyces cerevisiae	Eukarya	RF01960	Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1	Electron microscopy	3.28	2019-07-24
77	6FAI\|1\|2	Small subunit ribosomal RNA	20S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit	Electron microscopy	3.4	2018-02-28
78	4U53\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-ray diffraction	3.3	2014-10-22
79	5JUP\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)	Electron microscopy	3.5	2016-10-05
80	4U50\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
81	6RBD\|1\|2	Small subunit ribosomal RNA	20S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	State 1 of yeast Tsr1-TAP Rps20-Deltaloop pre-40S particles	Electron microscopy	3.47	2019-06-26
82	4U53\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-ray diffraction	3.3	2014-10-22
83	6SV4\|1\|2	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	The cryo-EM structure of SDD1-stalled collided trisome.	Electron microscopy	3.3	2020-03-04
84	4U56\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-ray diffraction	3.45	2014-10-22
85	4U56\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-ray diffraction	3.45	2014-10-22
86	5MC6\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae	Electron microscopy	3.8	2017-01-18
87	6T83\|1\|2b	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	Electron microscopy	4	2019-12-25
88	6T83\|1\|a	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	Electron microscopy	4	2019-12-25
89	5JUO\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)	Electron microscopy	4	2016-10-05
90	5JUT\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)	Electron microscopy	4	2016-10-05
91	5JUU\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)	Electron microscopy	4	2016-10-05
92	6RBE\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	State 2 of yeast Tsr1-TAP Rps20-Deltaloop pre-40S particles	Electron microscopy	3.8	2019-06-26
93	6EML\|1\|2	Small subunit ribosomal RNA	pre-18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Cryo-EM structure of a late pre-40S ribosomal subunit from Saccharomyces cerevisiae	Electron microscopy	3.6	2017-11-29
94	6GQB\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)	Electron microscopy	3.9	2018-07-11
95	6Y7C\|1\|2	Small subunit ribosomal RNA	20S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Early cytoplasmic yeast pre-40S particle (purified with Tsr1 as bait)	Electron microscopy	3.8	2020-03-18
96	5JUS\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure III (mid-rotated 40S subunit)	Electron microscopy	4.2	2016-10-05
97	6GQV\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)	Electron microscopy	4	2018-07-11
98	4U4O\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-ray diffraction	3.6	2014-10-22
99	4U4O\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-ray diffraction	3.6	2014-10-22
100	4V8Y\|1\|B2	Small subunit ribosomal RNA	18S RIBOSOMAL RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex	Electron microscopy	4.3	2014-07-09
101	6GQ1\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin)	Electron microscopy	4.4	2018-07-11
102	5LL6\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation initiation	Electron microscopy	3.9	2017-04-12
103	6I7O\|1\|2b	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.	Electron microscopy	5.3	2019-01-16
104	6I7O\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.	Electron microscopy	5.3	2019-01-16
105	3J6Y\|1\|1S	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 2 degree rotation (Class I)	Electron microscopy	6.1	2014-06-11
106	3J6X\|1\|1S	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 5 degree rotation (Class II)	Electron microscopy	6.1	2014-06-11
107	3J77\|1\|1S	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)	Electron microscopy	6.2	2014-08-06
108	3J78\|1\|1S	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)	Electron microscopy	6.3	2014-08-06
109	4V8Z\|1\|B2	Small subunit ribosomal RNA	18S RIBOSOMAL RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex	Electron microscopy	6.6	2014-07-09
110	4V6I\|1\|CA	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Localization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosome	Electron microscopy	8.8	2014-07-09

Release history

Release	3.123	3.124	3.125	3.126	3.127	3.128	3.129	3.130	3.131	3.132	3.133	3.134	3.135	3.136
Date	2020-04-22	2020-04-29	2020-05-06	2020-05-13	2020-05-20	2020-05-27	2020-06-03	2020-06-10	2020-06-17	2020-06-24	2020-07-01	2020-07-08	2020-07-15	2020-07-22

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_all_03510.30	NR_all_03510.29	3.123	(108) 3J6X\|1\|1S, 3J6Y\|1\|1S, 3J77\|1\|1S, 3J78\|1\|1S, 4U3M\|1\|2, 4U3M\|1\|6, 4U3N\|1\|2, 4U3N\|1\|6, 4U3U\|1\|2, 4U3U\|1\|6, 4U4N\|1\|2, 4U4N\|1\|6, 4U4O\|1\|2, 4U4O\|1\|6, 4U4Q\|1\|2, 4U4Q\|1\|6, 4U4R\|1\|2, 4U4R\|1\|6, 4U4U\|1\|2, 4U4U\|1\|6, 4U4Y\|1\|2, 4U4Y\|1\|6, 4U4Z\|1\|2, 4U4Z\|1\|6, 4U50\|1\|2, 4U50\|1\|6, 4U51\|1\|2, 4U51\|1\|6, 4U52\|1\|2, 4U52\|1\|6, 4U53\|1\|2, 4U53\|1\|6, 4U55\|1\|2, 4U55\|1\|6, 4U56\|1\|2, 4U56\|1\|6, 4U6F\|1\|2, 4U6F\|1\|6, 4V6I\|1\|CA, 4V7R\|1\|A1, 4V7R\|1\|C1, 4V88\|1\|A2, 4V88\|1\|A6, 4V8Y\|1\|B2, 4V8Z\|1\|B2, 5DAT\|1\|2, 5DAT\|1\|6, 5DC3\|1\|2, 5DC3\|1\|6, 5DGE\|1\|2, 5DGE\|1\|6, 5DGF\|1\|2, 5DGF\|1\|6, 5DGV\|1\|2, 5DGV\|1\|6, 5I4L\|1\|2, 5I4L\|1\|6, 5JUO\|1\|A, 5JUP\|1\|A, 5JUS\|1\|A, 5JUT\|1\|A, 5JUU\|1\|A, 5LL6\|1\|2, 5LYB\|1\|2, 5LYB\|1\|6, 5M1J\|1\|22, 5MC6\|1\|2, 5MEI\|1\|6, 5MEI\|1\|A, 5NDG\|1\|2, 5NDG\|1\|6, 5NDV\|1\|2, 5NDV\|1\|6, 5NDW\|1\|2, 5NDW\|1\|6, 5OBM\|1\|2, 5OBM\|1\|6, 5ON6\|1\|6, 5ON6\|1\|A, 5TBW\|1\|A, 5TBW\|1\|sR, 5TGA\|1\|2, 5TGA\|1\|6, 5TGM\|1\|2, 5TGM\|1\|6, 6EML\|1\|2, 6FAI\|1\|2, 6GQ1\|1\|2, 6GQB\|1\|2, 6GQV\|1\|2, 6HHQ\|1\|A, 6HHQ\|1\|sR, 6I7O\|1\|2, 6I7O\|1\|2b, 6Q8Y\|1\|2, 6RBD\|1\|2, 6RBE\|1\|2, 6S47\|1\|BA, 6SNT\|1\|2, 6SV4\|1\|2, 6SV4\|1\|2b, 6SV4\|1\|2c, 6T4Q\|1\|C2, 6T7I\|1\|C2, 6T7T\|1\|C2, 6T83\|1\|2b, 6T83\|1\|a, 6Y7C\|1\|2	(2) 6TB3\|1\|2, 6TNU\|1\|2	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_all_03510.30	NR_all_03510.31	3.137	(110) 3J6X\|1\|1S, 3J6Y\|1\|1S, 3J77\|1\|1S, 3J78\|1\|1S, 4U3M\|1\|2, 4U3M\|1\|6, 4U3N\|1\|2, 4U3N\|1\|6, 4U3U\|1\|2, 4U3U\|1\|6, 4U4N\|1\|2, 4U4N\|1\|6, 4U4O\|1\|2, 4U4O\|1\|6, 4U4Q\|1\|2, 4U4Q\|1\|6, 4U4R\|1\|2, 4U4R\|1\|6, 4U4U\|1\|2, 4U4U\|1\|6, 4U4Y\|1\|2, 4U4Y\|1\|6, 4U4Z\|1\|2, 4U4Z\|1\|6, 4U50\|1\|2, 4U50\|1\|6, 4U51\|1\|2, 4U51\|1\|6, 4U52\|1\|2, 4U52\|1\|6, 4U53\|1\|2, 4U53\|1\|6, 4U55\|1\|2, 4U55\|1\|6, 4U56\|1\|2, 4U56\|1\|6, 4U6F\|1\|2, 4U6F\|1\|6, 4V6I\|1\|CA, 4V7R\|1\|A1, 4V7R\|1\|C1, 4V88\|1\|A2, 4V88\|1\|A6, 4V8Y\|1\|B2, 4V8Z\|1\|B2, 5DAT\|1\|2, 5DAT\|1\|6, 5DC3\|1\|2, 5DC3\|1\|6, 5DGE\|1\|2, 5DGE\|1\|6, 5DGF\|1\|2, 5DGF\|1\|6, 5DGV\|1\|2, 5DGV\|1\|6, 5I4L\|1\|2, 5I4L\|1\|6, 5JUO\|1\|A, 5JUP\|1\|A, 5JUS\|1\|A, 5JUT\|1\|A, 5JUU\|1\|A, 5LL6\|1\|2, 5LYB\|1\|2, 5LYB\|1\|6, 5M1J\|1\|22, 5MC6\|1\|2, 5MEI\|1\|6, 5MEI\|1\|A, 5NDG\|1\|2, 5NDG\|1\|6, 5NDV\|1\|2, 5NDV\|1\|6, 5NDW\|1\|2, 5NDW\|1\|6, 5OBM\|1\|2, 5OBM\|1\|6, 5ON6\|1\|6, 5ON6\|1\|A, 5TBW\|1\|A, 5TBW\|1\|sR, 5TGA\|1\|2, 5TGA\|1\|6, 5TGM\|1\|2, 5TGM\|1\|6, 6EML\|1\|2, 6FAI\|1\|2, 6GQ1\|1\|2, 6GQB\|1\|2, 6GQV\|1\|2, 6HHQ\|1\|A, 6HHQ\|1\|sR, 6I7O\|1\|2, 6I7O\|1\|2b, 6Q8Y\|1\|2, 6RBD\|1\|2, 6RBE\|1\|2, 6S47\|1\|BA, 6SNT\|1\|2, 6SV4\|1\|2, 6SV4\|1\|2b, 6SV4\|1\|2c, 6T4Q\|1\|C2, 6T7I\|1\|C2, 6T7T\|1\|C2, 6T83\|1\|2b, 6T83\|1\|a, 6TB3\|1\|2, 6TNU\|1\|2, 6Y7C\|1\|2	(0)	(2) 6Z6J\|1\|C2, 6Z6K\|1\|C2

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	Length
1	4V6I\|1\|CA	Localization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosome	ELECTRON MICROSCOPY	8.8	1721
2	6SV4\|1\|2c	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	1758
3	6SV4\|1\|2b	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	1758
4	6I7O\|1\|2b	The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.	ELECTRON MICROSCOPY	5.3	1758
5	5NDV\|1\|6	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	1683
6	5OBM\|1\|6	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.4	1739
7	5DAT\|1\|6	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-RAY DIFFRACTION	3.15	1796
8	5DGF\|1\|6	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.3	1796
9	5DGE\|1\|6	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-RAY DIFFRACTION	3.45	1796
10	5DC3\|1\|6	Complex of yeast 80S ribosome with non-modified eIF5A	X-RAY DIFFRACTION	3.25	1796
11	5DGV\|1\|6	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.1	1796
12	5TGM\|1\|6	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.5	1796
13	4U56\|1\|6	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.45	1795
14	4U52\|1\|6	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1795
15	5ON6\|1\|6	Crystal structure of haemanthamine bound to the 80S ribosome	X-RAY DIFFRACTION	3.1	1783
16	5MEI\|1\|6	Crystal structure of Agelastatin A bound to the 80S ribosome	X-RAY DIFFRACTION	3.5	1783
17	6HHQ\|1\|sR	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1783
18	5TBW\|1\|sR	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1783
19	4U4Y\|1\|6	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1795
20	4V88\|1\|A6	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-RAY DIFFRACTION	3	1770
21	5LYB\|1\|6	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	1796
22	5TGA\|1\|6	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.3	1796
23	4U6F\|1\|6	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1795
24	4U4R\|1\|6	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.8	1795
25	4U3U\|1\|6	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.9	1795
26	4U3M\|1\|6	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1795
27	4U3N\|1\|6	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1795
28	4U4N\|1\|6	Crystal structure of Edeine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1795
29	4U4U\|1\|6	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1795
30	4U4Q\|1\|6	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1795
31	4U51\|1\|6	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1795
32	5I4L\|1\|6	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1795
33	4U4Z\|1\|6	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1795
34	4U55\|1\|6	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1795
35	4U50\|1\|6	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1795
36	4U53\|1\|6	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	1795
37	4U4O\|1\|6	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.6	1791
38	5NDW\|1\|6	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	1736
39	5NDG\|1\|6	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	1700
40	4V7R\|1\|C1	Yeast 80S ribosome.	X-RAY DIFFRACTION	4	1789
41	4V7R\|1\|A1	Yeast 80S ribosome.	X-RAY DIFFRACTION	4	1789
42	5NDV\|1\|2	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	1712
43	5NDG\|1\|2	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	1688
44	5NDW\|1\|2	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	1770
45	5OBM\|1\|2	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.4	1712
46	4U4O\|1\|2	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.6	1750
47	5DGE\|1\|2	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-RAY DIFFRACTION	3.45	1782
48	5DAT\|1\|2	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-RAY DIFFRACTION	3.15	1782
49	5DGF\|1\|2	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.3	1782
50	5TGM\|1\|2	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.5	1782
51	5DGV\|1\|2	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.1	1782
52	5DC3\|1\|2	Complex of yeast 80S ribosome with non-modified eIF5A	X-RAY DIFFRACTION	3.25	1782
53	5TBW\|1\|A	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1781
54	4U4Y\|1\|2	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1750
55	4V8Y\|1\|B2	Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex	ELECTRON MICROSCOPY	4.3	1768
56	4V88\|1\|A2	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-RAY DIFFRACTION	3	1768
57	4V8Z\|1\|B2	Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex	ELECTRON MICROSCOPY	6.6	1768
58	5LYB\|1\|2	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	1782
59	5TGA\|1\|2	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.3	1782
60	5I4L\|1\|2	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1781
61	4U4N\|1\|2	Crystal structure of Edeine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1750
62	4U4U\|1\|2	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1750
63	4U4Q\|1\|2	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1750
64	4U3N\|1\|2	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1750
65	4U6F\|1\|2	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1781
66	4U3U\|1\|2	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.9	1750
67	4U4R\|1\|2	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.8	1750
68	4U3M\|1\|2	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1750
69	4U4Z\|1\|2	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1750
70	4U50\|1\|2	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1750
71	4U53\|1\|2	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	1750
72	4U51\|1\|2	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1750
73	4U55\|1\|2	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1750
74	4U52\|1\|2	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1750
75	6HHQ\|1\|A	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1781
76	5ON6\|1\|A	Crystal structure of haemanthamine bound to the 80S ribosome	X-RAY DIFFRACTION	3.1	1781
77	5MEI\|1\|A	Crystal structure of Agelastatin A bound to the 80S ribosome	X-RAY DIFFRACTION	3.5	1781
78	4U56\|1\|2	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.45	1750
79	5JUP\|1\|A	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)	ELECTRON MICROSCOPY	3.5	1781
80	5JUS\|1\|A	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure III (mid-rotated 40S subunit)	ELECTRON MICROSCOPY	4.2	1781
81	5JUT\|1\|A	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)	ELECTRON MICROSCOPY	4	1781
82	5JUO\|1\|A	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)	ELECTRON MICROSCOPY	4	1781
83	3J6Y\|1\|1S	S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 2 degree rotation (Class I)	ELECTRON MICROSCOPY	6.1	1781
84	3J6X\|1\|1S	S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 5 degree rotation (Class II)	ELECTRON MICROSCOPY	6.1	1781
85	6GQV\|1\|2	Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)	ELECTRON MICROSCOPY	4	1776
86	6GQ1\|1\|2	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin)	ELECTRON MICROSCOPY	4.4	1776
87	6GQB\|1\|2	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)	ELECTRON MICROSCOPY	3.9	1776
88	3J77\|1\|1S	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)	ELECTRON MICROSCOPY	6.2	1781
89	3J78\|1\|1S	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)	ELECTRON MICROSCOPY	6.3	1781
90	5M1J\|1\|22	Nonstop ribosomal complex bound with Dom34 and Hbs1	ELECTRON MICROSCOPY	3.3	1781
91	6S47\|1\|BA	Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1	ELECTRON MICROSCOPY	3.28	1707
92	6T83\|1\|a	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	ELECTRON MICROSCOPY	4	1758
93	6I7O\|1\|2	The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.	ELECTRON MICROSCOPY	5.3	1758
94	6SV4\|1\|2	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	1758
95	5JUU\|1\|A	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)	ELECTRON MICROSCOPY	4	1781
96	6TNU\|1\|2	Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.	ELECTRON MICROSCOPY	3.1	1771
97	6T83\|1\|2b	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	ELECTRON MICROSCOPY	4	1771
98	6TB3\|1\|2	yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complex	ELECTRON MICROSCOPY	2.8	1771
99	6SNT\|1\|2	Yeast 80S ribosome stalled on SDD1 mRNA.	ELECTRON MICROSCOPY	2.8	1771
100	6T4Q\|1\|C2	Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.	ELECTRON MICROSCOPY	2.6	1771
101	6T7I\|1\|C2	Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.	ELECTRON MICROSCOPY	3.2	1771
102	6T7T\|1\|C2	Structure of yeast 80S ribosome stalled on poly(A) tract.	ELECTRON MICROSCOPY	3.1	1771
103	6Q8Y\|1\|2	Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complex	ELECTRON MICROSCOPY	3.1	1767
104	5MC6\|1\|2	Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae	ELECTRON MICROSCOPY	3.8	1767
105	5LL6\|1\|2	Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation initiation	ELECTRON MICROSCOPY	3.9	1325
106	6RBE\|1\|2	State 2 of yeast Tsr1-TAP Rps20-Deltaloop pre-40S particles	ELECTRON MICROSCOPY	3.8	1750
107	6EML\|1\|2	Cryo-EM structure of a late pre-40S ribosomal subunit from Saccharomyces cerevisiae	ELECTRON MICROSCOPY	3.6	1675
108	6Y7C\|1\|2	Early cytoplasmic yeast pre-40S particle (purified with Tsr1 as bait)	ELECTRON MICROSCOPY	3.8	1731
109	6RBD\|1\|2	State 1 of yeast Tsr1-TAP Rps20-Deltaloop pre-40S particles	ELECTRON MICROSCOPY	3.47	1777
110	6FAI\|1\|2	Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit	ELECTRON MICROSCOPY	3.4	1775

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_all_03510.30 Obsolete

Release history

Parents

Children