Equivalence class NR_all_05457.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 12EG|1|R+ 12EG|1|A+ 12EG|1|B (rep) | DNA non-template strand, DNA template strand, RNA scaffold | Escherichia coli | Pre-translocated RNA polymerase elemental paused elongation complex, TL semiclosed (ePEC semiclosed) | Electron microscopy | 2.8 | 87 | 2026-07-01 | |||
| 2 | 12EE|1|R+ 12EE|1|A+ 12EE|1|B | DNA non-template strand, DNA template strand, RNA scaffold | Escherichia coli | Pre-translocated RNA polymerase elemental paused elongation complex, TL open (ePEC open) | Electron microscopy | 2.8 | 87 | 2026-07-01 | |||
| 3 | 12EI|1|R+ 12EI|1|A+ 12EI|1|B | DNA non-template strand, DNA template strand, RNA scaffold | Escherichia coli | Pre-translocated RNA polymerase elemental paused elongation complex, TL closed (ePEC closed) | Electron microscopy | 2.8 | 121 | 2026-07-01 | |||
| 4 | 12EB|1|R+ 12EB|1|A+ 12EB|1|B | DNA non-template strand, DNA template strand, RNA scaffold | Escherichia coli | Half-translocated RNA polymerase elemental paused elongation complex, swiveled with ppGpp (ePEC swiveled + ppGpp) | Electron microscopy | 2.8 | 81 | 2026-07-01 | |||
| 5 | 12EC|1|R+ 12EC|1|A+ 12EC|1|B | DNA non-template strand, DNA template strand, RNA scaffold | Escherichia coli | Half-translocated RNA polymerase elemental paused elongation complex, swiveled (ePEC swiveled) | Electron microscopy | 2.6 | 83 | 2026-07-01 | |||
| 6 | 12EF|1|R+ 12EF|1|A+ 12EF|1|B | DNA non-template strand, DNA template strand, RNA scaffold | Escherichia coli | Pre-translocated RNA polymerase elemental paused elongation complex, TL semiclosed with ppGpp (ePEC semiclosed + ppGpp) | Electron microscopy | 3.1 | 87 | 2026-07-01 | |||
| 7 | 12ED|1|R+ 12ED|1|A+ 12ED|1|B | DNA non-template strand, DNA template strand, RNA scaffold | Escherichia coli | Pre-translocated RNA polymerase elemental paused elongation complex, TL open with ppGpp (ePEC open + ppGpp) | Electron microscopy | 3 | 87 | 2026-07-01 | |||
| 8 | 12EH|1|R+ 12EH|1|A+ 12EH|1|B | DNA non-template strand, DNA template strand, RNA scaffold | Escherichia coli | Pre-translocated RNA polymerase elemental paused elongation complex, TL closed with ppGpp (ePEC closed + ppGpp) | Electron microscopy | 3.2 | 121 | 2026-07-01 |
Release history
| Release | 4.46 |
|---|---|
| Date | 2026-07-01 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 12EH|1|R+ 12EH|1|A+ 12EH|1|B | Pre-translocated RNA polymerase elemental paused elongation complex, TL closed with ppGpp (ePEC closed + ppGpp) | ELECTRON MICROSCOPY | 3.2 | 121 | |
| 2 | 12EI|1|R+ 12EI|1|A+ 12EI|1|B | Pre-translocated RNA polymerase elemental paused elongation complex, TL closed (ePEC closed) | ELECTRON MICROSCOPY | 2.8 | 121 | |
| 3 | 12EF|1|R+ 12EF|1|A+ 12EF|1|B | Pre-translocated RNA polymerase elemental paused elongation complex, TL semiclosed with ppGpp (ePEC semiclosed + ppGpp) | ELECTRON MICROSCOPY | 3.1 | 87 | |
| 4 | 12EG|1|R+ 12EG|1|A+ 12EG|1|B | Pre-translocated RNA polymerase elemental paused elongation complex, TL semiclosed (ePEC semiclosed) | ELECTRON MICROSCOPY | 2.8 | 87 | |
| 5 | 12ED|1|R+ 12ED|1|A+ 12ED|1|B | Pre-translocated RNA polymerase elemental paused elongation complex, TL open with ppGpp (ePEC open + ppGpp) | ELECTRON MICROSCOPY | 3 | 87 | |
| 6 | 12EE|1|R+ 12EE|1|A+ 12EE|1|B | Pre-translocated RNA polymerase elemental paused elongation complex, TL open (ePEC open) | ELECTRON MICROSCOPY | 2.8 | 87 | |
| 7 | 12EB|1|R+ 12EB|1|A+ 12EB|1|B | Half-translocated RNA polymerase elemental paused elongation complex, swiveled with ppGpp (ePEC swiveled + ppGpp) | ELECTRON MICROSCOPY | 2.8 | 81 | |
| 8 | 12EC|1|R+ 12EC|1|A+ 12EC|1|B | Half-translocated RNA polymerase elemental paused elongation complex, swiveled (ePEC swiveled) | ELECTRON MICROSCOPY | 2.6 | 83 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: