Equivalence class NR_all_08470.5 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3J6B|1|A (rep) | Large subunit ribosomal RNA | 21S ribosomal RNA | Saccharomyces cerevisiae | Mitochondria | RF02541 | Structure of the yeast mitochondrial large ribosomal subunit | Electron microscopy | 3.2 | 2713 | 2014-04-09 |
| 2 | 9HM0|1|AA | Large subunit ribosomal RNA | 21S mitochondrial rRNA | Saccharomyces cerevisiae W303 | Mitochondria | RF02541 | Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome | Electron microscopy | 3 | 2708 | 2025-12-17 |
| 3 | 9HLZ|1|AA | Large subunit ribosomal RNA | 21S mitochondrial rRNA | Saccharomyces cerevisiae W303 | Mitochondria | RF02541 | Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome | Electron microscopy | 3.2 | 2709 | 2025-12-17 |
| 4 | 8UXA|1|A | Large subunit ribosomal RNA | Large ribosomal subunit rRNA | Saccharomyces cerevisiae | Mitochondria | RF02540 | Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I | Electron microscopy | 3.2 | 2876 | 2025-11-19 |
| 5 | 5MRE|1|A | Large subunit ribosomal RNA | 21S ribosomal RNA | Saccharomyces cerevisiae | Mitochondria | RF02541 | Structure of the yeast mitochondrial ribosome - Class B | Electron microscopy | 3.75 | 2709 | 2017-02-15 |
| 6 | 5MRC|1|A | Large subunit ribosomal RNA | 21S ribosomal RNA | Saccharomyces cerevisiae | Mitochondria | RF02541 | Structure of the yeast mitochondrial ribosome - Class A | Electron microscopy | 3.25 | 2709 | 2017-02-15 |
| 7 | 5MRF|1|A | Large subunit ribosomal RNA | 21S ribosomal RNA | Saccharomyces cerevisiae | Mitochondria | RF02541 | Structure of the yeast mitochondrial ribosome - Class C | Electron microscopy | 4.97 | 2709 | 2017-02-15 |
Release history
| Release | 4.18 |
|---|---|
| Date | 2025-12-17 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 9HM0|1|AA | Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome | ELECTRON MICROSCOPY | 3 | 2708 | |
| 2 | 9HLZ|1|AA | Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome | ELECTRON MICROSCOPY | 3.2 | 2709 | |
| 3 | 5MRF|1|A | Structure of the yeast mitochondrial ribosome - Class C | ELECTRON MICROSCOPY | 4.97 | 2709 | |
| 4 | 5MRC|1|A | Structure of the yeast mitochondrial ribosome - Class A | ELECTRON MICROSCOPY | 3.25 | 2709 | |
| 5 | 5MRE|1|A | Structure of the yeast mitochondrial ribosome - Class B | ELECTRON MICROSCOPY | 3.75 | 2709 | |
| 6 | 8UXA|1|A | Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I | ELECTRON MICROSCOPY | 3.2 | 2876 | |
| 7 | 3J6B|1|A | Structure of the yeast mitochondrial large ribosomal subunit | ELECTRON MICROSCOPY | 3.2 | 2713 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: