Equivalence class NR_all_12971.5 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7P7Q|1|B (rep) | 5S ribosomal RNA | 5S rRNA | Enterococcus faecalis | Bacteria | RF00001 | E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume | Electron microscopy | 2.4 | 2022-02-23 |
| 2 | 6W6P|1|B | 5S ribosomal RNA | 5S rRNA | Enterococcus faecalis | Bacteria | RF00001 | MultiBody Refinement of 70S Ribosome from Enterococcus faecalis | Electron microscopy | 2.9 | 2020-10-14 |
| 3 | 7P7T|1|B | 5S ribosomal RNA | 5S rRNA | Enterococcus faecalis | Bacteria | RF00001 | PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state III | Electron microscopy | 2.9 | 2022-02-23 |
| 4 | 7NHK|1|B | 5S ribosomal RNA | 5S rRNA | Enterococcus faecalis | Bacteria | RF00001 | LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis | Electron microscopy | 2.9 | 2021-05-05 |
| 5 | 7P7S|1|B | 5S ribosomal RNA | 5S rRNA | Enterococcus faecalis | Bacteria | RF00001 | PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state II | Electron microscopy | 3 | 2022-02-23 |
| 6 | 6WU9|1|B | 5S ribosomal RNA | 5S rRNA | Enterococcus faecalis OG1RF | Bacteria | RF00001 | 50S subunit of 70S Ribosome Enterococcus faecalis MultiBody refinement | Electron microscopy | 2.9 | 2020-11-04 |
| 7 | 7P7U|1|B | 5S ribosomal RNA | 5S rRNA | Enterococcus faecalis | Bacteria | RF00001 | E. faecalis 70S ribosome with P-tRNA, state IV | Electron microscopy | 3.1 | 2022-02-23 |
| 8 | 6O90|1|B | 5S ribosomal RNA | 4S rRNA | Enterococcus faecalis | Bacteria | RF00001 | Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05 | Electron microscopy | 3.49 | 2020-09-23 |
| 9 | 6O8Z|1|B | 5S ribosomal RNA | 5S rRNA | Enterococcus faecalis | Bacteria | RF00001 | Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04 | Electron microscopy | 3.49 | 2020-09-16 |
| 10 | 6O8W|1|B | 5S ribosomal RNA | 5S rRNA | Enterococcus faecalis | Bacteria | RF00001 | Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01 | Electron microscopy | 3.53 | 2020-09-23 |
| 11 | 6O8X|1|B | 5S ribosomal RNA | 5S rRNA | Enterococcus faecalis | Bacteria | RF00001 | Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02 | Electron microscopy | 3.68 | 2020-09-23 |
| 12 | 6O8Y|1|B | 5S ribosomal RNA | 5S rRNA | Enterococcus faecalis | Bacteria | RF00001 | Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class03 | Electron microscopy | 4.14 | 2020-09-23 |
Parents
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 7NHK|1|B | LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis | ELECTRON MICROSCOPY | 2.9 | 114 | |
| 2 | 7P7Q|1|B | E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume | ELECTRON MICROSCOPY | 2.4 | 114 | |
| 3 | 7P7S|1|B | PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state II | ELECTRON MICROSCOPY | 3 | 114 | |
| 4 | 7P7T|1|B | PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state III | ELECTRON MICROSCOPY | 2.9 | 114 | |
| 5 | 7P7U|1|B | E. faecalis 70S ribosome with P-tRNA, state IV | ELECTRON MICROSCOPY | 3.1 | 114 | |
| 6 | 6O8Y|1|B | Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class03 | ELECTRON MICROSCOPY | 4.14 | 116 | |
| 7 | 6O8X|1|B | Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02 | ELECTRON MICROSCOPY | 3.68 | 116 | |
| 8 | 6O90|1|B | Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05 | ELECTRON MICROSCOPY | 3.49 | 116 | |
| 9 | 6O8Z|1|B | Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04 | ELECTRON MICROSCOPY | 3.49 | 116 | |
| 10 | 6WU9|1|B | 50S subunit of 70S Ribosome Enterococcus faecalis MultiBody refinement | ELECTRON MICROSCOPY | 2.9 | 116 | |
| 11 | 6W6P|1|B | MultiBody Refinement of 70S Ribosome from Enterococcus faecalis | ELECTRON MICROSCOPY | 2.9 | 116 | |
| 12 | 6O8W|1|B | Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01 | ELECTRON MICROSCOPY | 3.53 | 116 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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