Equivalence class NR_all_16703.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 9Q2P|1|2 (rep) | Transfer RNA | tRNA | Oryctolagus cuniculus | Eukarya | RF00005 | Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF | Electron microscopy | 3 | 75 | 2026-06-17 |
| 2 | 9Q2P|1|3 | Transfer RNA | tRNA | Oryctolagus cuniculus | Eukarya | RF00005 | Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF | Electron microscopy | 3 | 75 | 2026-06-17 |
| 3 | 9Q2M|1|ET | Transfer RNA | E site Ala-tRNA | Oryctolagus cuniculus | Eukarya | RF00005 | Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF | Electron microscopy | 3.3 | 75 | 2026-06-17 |
| 4 | 9Q2O|1|AT | Transfer RNA | Ala-tRNA | Oryctolagus cuniculus | Eukarya | RF00005 | NediV IRES in complex with Rabbit 80S ribosome with A site Ala-tRNA | Electron microscopy | 4.1 | 76 | 2026-06-17 |
| 5 | 9Q2T|1|PT | Transfer RNA | ala-tRNA | Oryctolagus cuniculus | Eukarya | RF00005 | NediV IRES in complex with Rabbit 80S ribosome with eEF2 and P site Ala-tRNA | Electron microscopy | 4.1 | 76 | 2026-06-17 |
Release history
| Release | 4.44 |
|---|---|
| Date | 2026-06-17 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 9Q2O|1|AT | NediV IRES in complex with Rabbit 80S ribosome with A site Ala-tRNA | ELECTRON MICROSCOPY | 4.1 | 76 | |
| 2 | 9Q2T|1|PT | NediV IRES in complex with Rabbit 80S ribosome with eEF2 and P site Ala-tRNA | ELECTRON MICROSCOPY | 4.1 | 76 | |
| 3 | 9Q2P|1|2 | Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF | ELECTRON MICROSCOPY | 3 | 75 | |
| 4 | 9Q2P|1|3 | Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF | ELECTRON MICROSCOPY | 3 | 75 | |
| 5 | 9Q2M|1|ET | Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF | ELECTRON MICROSCOPY | 3.3 | 75 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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