Equivalence class NR_all_17196.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8GWB|1|J+ 8GWB|1|I (rep) | primer, template | Severe acute respiratory syndrome coronavirus 2 | A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | Electron microscopy | 2.75 | 52 | 2022-12-07 | |||
| 2 | 8GWI|1|J+ 8GWI|1|I | primer, RNA (27-MER) | Severe acute respiratory syndrome coronavirus 2 | A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | Electron microscopy | 3.18 | 52 | 2022-12-14 | |||
| 3 | 8GWG|1|J+ 8GWG|1|I | primer, Template | Severe acute respiratory syndrome coronavirus 2 | A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | Electron microscopy | 3.37 | 52 | 2022-12-14 | |||
| 4 | 7EGQ|1|J+ 7EGQ|1|I | primer RNA, Template RNA | Severe acute respiratory syndrome coronavirus 2 | Co-transcriptional capping machineries in SARS-CoV-2 RTC: Coupling of N7-methyltransferase and 3'-5' exoribonuclease with polymerase reveals mechanisms for capping and proofreading | Electron microscopy | 3.35 | 58 | 2021-07-21 | |||
| 5 | 8GWO|1|J+ 8GWO|1|I | RNA (25-MER), template | synthetic construct | A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | Electron microscopy | 3.8 | 52 | 2022-11-30 | |||
| 6 | 7EGQ|1|M+ 7EGQ|1|L | primer RNA, Template RNA | Severe acute respiratory syndrome coronavirus 2 | Co-transcriptional capping machineries in SARS-CoV-2 RTC: Coupling of N7-methyltransferase and 3'-5' exoribonuclease with polymerase reveals mechanisms for capping and proofreading | Electron microscopy | 3.35 | 58 | 2021-07-21 | |||
| 7 | 8GWN|1|J+ 8GWN|1|I | primer, template | Severe acute respiratory syndrome coronavirus 2 | A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | Electron microscopy | 3.38 | 52 | 2022-12-14 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_17196.1 | NR_all_95868.3 | 3.261 | (4) 7EGQ|1|J+7EGQ|1|I, 7EGQ|1|M+7EGQ|1|L, 8GWB|1|J+8GWB|1|I, 8GWO|1|J+8GWO|1|I | (3) 8GWG|1|J+8GWG|1|I, 8GWI|1|J+8GWI|1|I, 8GWN|1|J+8GWN|1|I | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_17196.1 | NR_all_17196.2 | 3.265 | (7) 7EGQ|1|J+7EGQ|1|I, 7EGQ|1|M+7EGQ|1|L, 8GWB|1|J+8GWB|1|I, 8GWG|1|J+8GWG|1|I, 8GWI|1|J+8GWI|1|I, 8GWN|1|J+8GWN|1|I, 8GWO|1|J+8GWO|1|I | (0) | (2) 8GWE|1|J+8GWE|1|I, 8GWF|1|J+8GWF|1|I |
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 8GWN|1|J+ 8GWN|1|I | A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | ELECTRON MICROSCOPY | 3.38 | 52 | |
| 2 | 8GWO|1|J+ 8GWO|1|I | A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | ELECTRON MICROSCOPY | 3.8 | 52 | |
| 3 | 8GWB|1|J+ 8GWB|1|I | A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | ELECTRON MICROSCOPY | 2.75 | 52 | |
| 4 | 8GWI|1|J+ 8GWI|1|I | A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | ELECTRON MICROSCOPY | 3.18 | 52 | |
| 5 | 8GWG|1|J+ 8GWG|1|I | A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | ELECTRON MICROSCOPY | 3.37 | 52 | |
| 6 | 7EGQ|1|M+ 7EGQ|1|L | Co-transcriptional capping machineries in SARS-CoV-2 RTC: Coupling of N7-methyltransferase and 3'-5' exoribonuclease with polymerase reveals mechanisms for capping and proofreading | ELECTRON MICROSCOPY | 3.35 | 58 | |
| 7 | 7EGQ|1|J+ 7EGQ|1|I | Co-transcriptional capping machineries in SARS-CoV-2 RTC: Coupling of N7-methyltransferase and 3'-5' exoribonuclease with polymerase reveals mechanisms for capping and proofreading | ELECTRON MICROSCOPY | 3.35 | 58 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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