NR_all_18586.78

Members (252)
History
Heat map

#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	9PN5\|1\|A3 (rep)	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae BY4741	Eukarya	RF00001	Composite map of hypomethylated 80S ribosome treated with hygromycin B	Electron microscopy	1.75	121	2026-05-20
2	8CEH\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Translocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	Electron microscopy	2.05	121	2023-09-20
3	8CDR\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	Electron microscopy	2.04	121	2023-09-20
4	8T2Y\|1\|A3	5S ribosomal RNA	5s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, PRE	Electron microscopy	2.2	121	2024-12-11
5	8PFR\|1\|LE	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Mouse RPL39L integrated into the yeast 60S ribosomal subunit	Electron microscopy	2.15	121	2024-06-26
6	7ZW0\|1\|LC	5S ribosomal RNA	5S ribosomal RNA (RDN5-1)	Saccharomyces cerevisiae W303	Eukarya	RF00001	FAP-80S Complex - Rotated state	Electron microscopy	2.4	121	2022-10-05
7	8P8N\|1\|LE	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Mouse RPL39 integrated into the yeast 60S ribosomal subunit	Electron microscopy	2.15	121	2024-06-12
8	8EVT\|1\|A3	5S ribosomal RNA	5s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) refined against a composite map	Electron microscopy	2.2	121	2023-09-06
9	8P8U\|1\|LE	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast 60S ribosomal subunit	Electron microscopy	2.23	121	2024-06-12
10	8BN3\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast 80S, ES7s delta, eIF5A, Stm1 containing	Electron microscopy	2.4	121	2024-01-10
11	8T2Z\|1\|A3	5S ribosomal RNA	5s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, POST	Electron microscopy	2.4	121	2024-12-11
12	8EVP\|1\|A3	5S ribosomal RNA	5s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure I	Electron microscopy	2.38	121	2023-09-06
13	8CGN\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Non-rotated 80S S. cerevisiae ribosome with ligands	Electron microscopy	2.28	121	2023-09-20
14	8AGX\|1\|h	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast RQC complex in state with the RING domain of Ltn1 in the IN position	Electron microscopy	2.4	121	2023-03-08
15	8EWC\|1\|A3	5S ribosomal RNA	5s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure II	Electron microscopy	2.45	121	2023-09-06
16	6T4Q\|1\|C4	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.	Electron microscopy	2.6	121	2019-12-25
17	8HFR\|1\|2f	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae S288C	Eukarya	RF00001	NPC-trapped pre-60S particle	Electron microscopy	2.64	121	2023-04-12
18	7MPJ\|1\|A3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Stm1 bound vacant 80S structure isolated from nop1-D243A	Electron microscopy	2.7	121	2022-05-11
19	8AAF\|1\|h	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast RQC complex in state G	Electron microscopy	2.5	121	2023-03-08
20	8AGZ\|1\|h	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position	Electron microscopy	2.6	121	2023-03-08
21	8T2X\|1\|A3	5S ribosomal RNA	5s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, A-site tRNA, messenger RNA and eIF5A, PRE	Electron microscopy	2.46	121	2024-12-11
22	8EVS\|1\|A3	5S ribosomal RNA	5s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure II	Electron microscopy	2.62	121	2023-09-06
23	8AGW\|1\|h	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast RQC complex in state D	Electron microscopy	2.6	121	2023-03-08
24	8AGT\|1\|h	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast RQC complex in state F	Electron microscopy	2.6	121	2023-03-08
25	9F9S\|1\|M3	5S ribosomal RNA	Saccharomyces cerevisiae S288C 5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast SDD1 Disome with Mbf1	Electron microscopy	2.9	121	2024-12-04
26	8AGV\|1\|h	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast RQC complex in state H	Electron microscopy	2.6	121	2023-03-08
27	8EVQ\|1\|A3	5S ribosomal RNA	5s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I	Electron microscopy	2.72	121	2023-09-06
28	7TOP\|1\|A5S	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20	Electron microscopy	2.4	121	2022-05-25
29	8AGU\|1\|h	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast RQC complex in state E	Electron microscopy	2.7	121	2023-03-08
30	6TB3\|1\|BR	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complex	Electron microscopy	2.8	121	2020-04-22
31	7TOO\|1\|A5S	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	Electron microscopy	2.7	121	2022-05-25
32	8ZH3\|1\|LB	5S ribosomal RNA	5S rRNA (121-MER)	Saccharomyces cerevisiae S288C	Eukarya	RF00001	80S ribosome with A/P-P/E tRNA and mRNA of WNV	Electron microscopy	2.7	121	2025-05-21
33	8ZHC\|1\|LB	5S ribosomal RNA	5S rRNA (121-MER)	Saccharomyces cerevisiae S288C	Eukarya	RF00001	pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV	Electron microscopy	2.3	121	2025-05-21
34	7N8B\|1\|A3	5S ribosomal RNA	5S	Saccharomyces cerevisiae	Eukarya	RF00001	Cycloheximide bound vacant 80S structure isolated from cbf5-D95A	Electron microscopy	3.05	121	2022-05-11
35	9F9S\|1\|L3	5S ribosomal RNA	Saccharomyces cerevisiae S288C 5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast SDD1 Disome with Mbf1	Electron microscopy	2.9	121	2024-12-04
36	8EWB\|1\|A3	5S ribosomal RNA	5s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure III	Electron microscopy	2.87	121	2023-09-06
37	8P8M\|1\|LE	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast 60S ribosomal subunit, RPL39 deletion	Electron microscopy	2.66	121	2024-06-12
38	8P9A\|1\|AS	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	80S yeast ribosome in complex with Methyllissoclimide	X-ray diffraction	2.9	121	2024-11-27
39	7ZUX\|1\|4	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Collided ribosome in a disome unit from S. cerevisiae	Electron microscopy	2.5	121	2023-02-22
40	8CG8\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Translocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	Electron microscopy	2.57	121	2023-09-20
41	8P9A\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	80S yeast ribosome in complex with Methyllissoclimide	X-ray diffraction	2.9	121	2024-11-27
42	8CF5\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	Electron microscopy	2.71	121	2023-09-20
43	8ZGY\|1\|LB	5S ribosomal RNA	5S rRNA (121-MER)	Saccharomyces cerevisiae S288C	Eukarya	RF00001	80S ribosome with P/E tRNA and mRNA of WNV	Electron microscopy	2.8	121	2025-05-21
44	8T30\|1\|A3	5S ribosomal RNA	5s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Hypomethylated yeast 80S bound with cycloheximide, unmodified U2921, mid rotated	Electron microscopy	2.88	121	2024-12-11
45	9DOV\|1\|A3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) and hygromycin B	Electron microscopy	2.49	121	2026-05-20
46	5TBW\|1\|AS	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-ray diffraction	3	121	2017-07-26
47	8EVR\|1\|A3	5S ribosomal RNA	5s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II	Electron microscopy	2.87	121	2023-09-06
48	7MPI\|1\|A3	5S ribosomal RNA	5s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Stm1 bound vacant 80S structure isolated from cbf5-D95A	Electron microscopy	3.05	121	2022-05-11
49	5TBW\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-ray diffraction	3	121	2017-07-26
50	8T3A\|1\|A3	5S ribosomal RNA	5s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, sordarin, and hibernating factor Los2	Electron microscopy	2.86	121	2024-12-11
51	6SNT\|1\|4	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast 80S ribosome stalled on SDD1 mRNA.	Electron microscopy	2.8	121	2020-03-04
52	8K82\|1\|C4	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of the yeast 80S ribosome with tigecycline, Not5 and P-site tRNA	Electron microscopy	3	121	2024-07-10
53	8PNN\|1\|AS	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	80S yeast ribosome in complex with Bromolissoclimide	X-ray diffraction	2.9	121	2025-05-28
54	9R9O\|1\|C4	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast 80S with nascent chain in complex with Ssb1-ADP in the S1 state	Electron microscopy	2.9	121	2025-12-24
55	4V88\|1\|A3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-ray diffraction	3	121	2014-07-09
56	7ZPQ\|1\|4	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)	Electron microscopy	3.47	121	2023-02-22
57	8ZHB\|1\|LB	5S ribosomal RNA	5S rRNA (121-MER)	Saccharomyces cerevisiae S288C	Eukarya	RF00001	80S ribosome with A/A P/E tRNA and mRNA of WNV	Electron microscopy	2.6	121	2025-05-21
58	4V88\|1\|A7	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-ray diffraction	3	121	2014-07-09
59	6RZZ\|1\|x	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.2	121	2019-06-26
60	8P85\|1\|AS	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	80S yeast ribosome in complex with Fluorolissoclimide	X-ray diffraction	2.9	121	2025-06-25
61	6QIK\|1\|x	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.1	121	2019-06-26
62	8T3D\|1\|A3	5S ribosomal RNA	5s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure III	Electron microscopy	2.95	121	2024-12-11
63	8P4V\|1\|AS	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	80S yeast ribosome in complex with HaterumaimideQ	X-ray diffraction	3.16	121	2024-10-16
64	8PNN\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	80S yeast ribosome in complex with Bromolissoclimide	X-ray diffraction	2.9	121	2025-05-28
65	8P4V\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	80S yeast ribosome in complex with HaterumaimideQ	X-ray diffraction	3.16	121	2024-10-16
66	8ZGR\|1\|LB	5S ribosomal RNA	5S rRNA (121-MER)	Saccharomyces cerevisiae S288C	Eukarya	RF00001	80S ribosome with A/A tRNA and mRNA of WNV	Electron microscopy	2.7	121	2025-05-21
67	6T7T\|1\|C4	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of yeast 80S ribosome stalled on poly(A) tract.	Electron microscopy	3.1	121	2019-12-25
68	6T7I\|1\|C4	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.	Electron microscopy	3.2	121	2019-12-25
69	6XIR\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative Stress	Electron microscopy	3.2	121	2020-08-26
70	8K2D\|1\|C4	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of the yeast 80S ribosome with tigecycline, eEF2, Stm1 and eIF5A	Electron microscopy	3.2	121	2024-07-10
71	9R9P\|1\|C4	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state	Electron microscopy	3	121	2025-12-24
72	6Q8Y\|1\|BR	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complex	Electron microscopy	3.1	121	2019-03-13
73	8P85\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	80S yeast ribosome in complex with Fluorolissoclimide	X-ray diffraction	2.9	121	2025-06-25
74	8BIP\|1\|C4	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex	Electron microscopy	3.1	121	2023-02-08
75	5I4L\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-ray diffraction	3.1	121	2016-06-22
76	9DP7\|1\|A3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) and hygromycin B, Class II	Electron microscopy	2.38	121	2026-05-20
77	7OSA\|1\|AB	5S ribosomal RNA	5S	Saccharomyces cerevisiae	Eukarya	RF00001	Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-ray diffraction	3	121	2021-12-08
78	7AZY\|1\|F	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae S288C	Eukarya	RF00001	Context-specific inhibition of eukaryotic translation by macrolide antibiotics	Electron microscopy	2.877	121	2021-05-19
79	5MEI\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Agelastatin A bound to the 80S ribosome	X-ray diffraction	3.5	121	2017-06-28
80	9OFV\|1\|h	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex	Electron microscopy	3.16	121	2025-06-11
81	5MEI\|1\|AS	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Agelastatin A bound to the 80S ribosome	X-ray diffraction	3.5	121	2017-06-28
82	6HHQ\|1\|AS	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-ray diffraction	3.1	121	2019-02-20
83	8Z70\|1\|B	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF00001	State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs during mRNA decoding	Electron microscopy	3.2	121	2024-12-11
84	5OBM\|1\|7	5S ribosomal RNA	5S Ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-ray diffraction	3.4	121	2017-12-13
85	6WOO\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP	Electron microscopy	2.9	121	2020-09-23
86	7RR5\|1\|C4	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of ribosomal complex bound with Rbg1/Tma46	Electron microscopy	3.23	121	2021-11-10
87	6Z6K\|1\|C4	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomes	Electron microscopy	3.4	121	2020-07-29
88	6HHQ\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-ray diffraction	3.1	121	2019-02-20
89	5I4L\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-ray diffraction	3.1	121	2016-06-22
90	8T3E\|1\|A3	5S ribosomal RNA	5s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure IV	Electron microscopy	3.04	121	2024-12-11
91	8T3B\|1\|A3	5S ribosomal RNA	5s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure I	Electron microscopy	3.08	121	2024-12-11
92	8T3F\|1\|A3	5S ribosomal RNA	5s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure V	Electron microscopy	3.09	121	2024-12-11
93	6TNU\|1\|BR	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.	Electron microscopy	3.1	121	2020-04-22
94	7B7D\|1\|LB	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF00001	Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs	Electron microscopy	3.3	121	2021-03-10
95	5LYB\|1\|7	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-ray diffraction	3.25	121	2016-11-23
96	8UTI\|1\|B	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Eukaryotic 80S ribosome with Reh1 and A/P site tRNA	Electron microscopy	3.13	121	2024-11-06
97	5ON6\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of haemanthamine bound to the 80S ribosome	X-ray diffraction	3.1	121	2018-02-28
98	5LYB\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-ray diffraction	3.25	121	2016-11-23
99	5ON6\|1\|AS	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of haemanthamine bound to the 80S ribosome	X-ray diffraction	3.1	121	2018-02-28
100	6RI5\|1\|x	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.3	121	2019-06-26
101	6S47\|1\|AB	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1	Electron microscopy	3.28	121	2019-07-24
102	6QT0\|1\|x	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.4	121	2019-06-26
103	6R86\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast Vms1-60S ribosomal subunit complex (post-state)	Electron microscopy	3.4	121	2019-07-31
104	6N8O\|1\|B	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunit	Electron microscopy	3.5	121	2019-03-13
105	8UT0\|1\|B	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA	Electron microscopy	3.22	121	2024-11-06
106	5OBM\|1\|3	5S ribosomal RNA	5S Ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-ray diffraction	3.4	121	2017-12-13
107	5NDW\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-ray diffraction	3.7	121	2017-12-13
108	6YLG\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)	Electron microscopy	3	117	2020-07-29
109	6N8M\|1\|B	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of pre-Lsg1 (PL) pre-60S ribosomal subunit	Electron microscopy	3.5	121	2019-03-13
110	5M1J\|1\|34	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Nonstop ribosomal complex bound with Dom34 and Hbs1	Electron microscopy	3.3	121	2017-01-18
111	5NDV\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-ray diffraction	3.3	121	2017-12-13
112	6R87\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)	Electron microscopy	3.4	121	2019-06-26
113	6N8L\|1\|2	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of early cytoplasmic-late (ECL) pre-60S ribosomal subunit	Electron microscopy	3.6	121	2019-03-13
114	6N8K\|1\|2	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunit	Electron microscopy	3.6	121	2019-03-13
115	5NDW\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-ray diffraction	3.7	121	2017-12-13
116	7ZS5\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA	Electron microscopy	3.2	121	2023-02-22
117	5NDV\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-ray diffraction	3.3	121	2017-12-13
118	7OSM\|1\|AB	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-ray diffraction	3	121	2021-12-08
119	5APO\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1	Electron microscopy	3.41	121	2015-12-16
120	8Y0U\|1\|C4	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	dormant ribosome with STM1	Electron microscopy	3.59	121	2024-02-07
121	6Z6J\|1\|C4	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of yeast Lso2 bound to 80S ribosomes under native condition	Electron microscopy	3.4	121	2020-07-29
122	6SV4\|1\|YR	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	The cryo-EM structure of SDD1-stalled collided trisome.	Electron microscopy	3.3	121	2020-03-04
123	7ZRS\|1\|4	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map	Electron microscopy	4.8	121	2023-02-22
124	6N8J\|1\|2	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunit	Electron microscopy	3.5	121	2019-03-13
125	5FCJ\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome	X-ray diffraction	3.1	121	2016-05-11
126	6R84\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)	Electron microscopy	3.6	121	2019-06-26
127	6N8N\|1\|B	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunit	Electron microscopy	3.8	121	2019-03-13
128	7ZUW\|1\|4	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae	Electron microscopy	4.3	121	2023-02-22
129	8XU8\|1\|B	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF00001	State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation	Electron microscopy	3.4	121	2024-12-11
130	5FCJ\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome	X-ray diffraction	3.1	121	2016-05-11
131	6T83\|1\|4b	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	Electron microscopy	4	121	2019-12-25
132	5NDG\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-ray diffraction	3.7	121	2017-12-13
133	5JUP\|1\|D	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)	Electron microscopy	3.5	121	2016-10-05
134	6SV4\|1\|ZR	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	The cryo-EM structure of SDD1-stalled collided trisome.	Electron microscopy	3.3	121	2020-03-04
135	7UG6\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF00001	Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922	Electron microscopy	2.9	121	2022-12-21
136	8BJQ\|1\|C4	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex	Electron microscopy	3.8	121	2023-02-08
137	6YLH\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Rix1-Rea1 pre-60S particle - full composite structure	Electron microscopy	3.1	117	2020-07-29
138	7UQB\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae BY4741	Eukarya	RF00001	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1-D52A strain with AlF4	Electron microscopy	2.43	121	2023-03-15
139	7OH3\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF00001	Nog1-TAP associated immature ribosomal particle population B from S. cerevisiae	Electron microscopy	3.4	121	2021-11-03
140	6GQB\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)	Electron microscopy	3.9	121	2018-07-11
141	6HD7\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of the ribosome-NatA complex	Electron microscopy	3.4	121	2018-12-19
142	6GQV\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)	Electron microscopy	4	121	2018-07-11
143	8EUB\|1\|A3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure I	Electron microscopy	2.52	121	2023-09-06
144	5NDG\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-ray diffraction	3.7	121	2017-12-13
145	7BT6\|1\|3	5S ribosomal RNA	RDN5-2 rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)	Electron microscopy	3.12	121	2020-10-28
146	5APN\|1\|7	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1	Electron microscopy	3.91	121	2015-12-16
147	6T83\|1\|Bb	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	Electron microscopy	4	121	2019-12-25
148	7NRC\|1\|LB	5S ribosomal RNA	5S rRNA (121-MER)	Saccharomyces cerevisiae S288C	Eukarya	RF00001	Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A	Electron microscopy	3.9	121	2021-05-05
149	6SV4\|1\|BR	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	The cryo-EM structure of SDD1-stalled collided trisome.	Electron microscopy	3.3	121	2020-03-04
150	5MC6\|1\|BR	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae	Electron microscopy	3.8	121	2017-01-18
151	6XIQ\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress	Electron microscopy	4.2	121	2020-08-26
152	8YLR\|1\|B	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF00001	State 6 (S6) of yeast 80S ribosome bound to 2 tRNAs and eEF2 and eEF3 during tranlocation	Electron microscopy	3.9	121	2024-12-11
153	6OIG\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Subunit joining exposes nascent pre-40S rRNA for processing and quality control	Electron microscopy	3.8	121	2020-09-30
154	7Z34\|1\|2	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF00001	Structure of pre-60S particle bound to DRG1(AFG2)	Electron microscopy	3.8	121	2022-09-21
155	8T3C\|1\|A3	5S ribosomal RNA	5s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II	Electron microscopy	3.86	121	2024-12-11
156	7OHQ\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF00001	Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae	Electron microscopy	3.1	121	2021-11-03
157	5T6R\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3 Complex	Electron microscopy	4.2	121	2017-02-08
158	6FT6\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors	Electron microscopy	3.9	121	2018-03-28
159	5TGM\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.5	121	2017-01-18
160	8YLD\|1\|B	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF00001	State 4a (S4a) of yeast 80S ribosome bound to 2 tRNAs and open eEF3 and eEF2 during translocation	Electron microscopy	3.9	121	2024-12-11
161	6GQ1\|1\|3	5S ribosomal RNA	5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin)	Electron microscopy	4.4	121	2018-07-11
162	8BQD\|1\|BR	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast 80S ribosome in complex with Map1 (conformation 1)	Electron microscopy	3.9	121	2023-03-22
163	5JUT\|1\|D	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)	Electron microscopy	4	121	2016-10-05
164	8BQX\|1\|BR	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast 80S ribosome in complex with Map1 (conformation 2)	Electron microscopy	3.8	121	2023-03-22
165	7NRD\|1\|LB	5S ribosomal RNA	5S rRNA (121-MER)	Saccharomyces cerevisiae S288C	Eukarya	RF00001	Structure of the yeast Gcn1 bound to a colliding stalled 80S ribosome with MBF1, A/P-tRNA and P/E-tRNA	Electron microscopy	4.36	121	2021-04-14
166	8Z71\|1\|B	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF00001	State 1a (S1a) of yeast 80S ribosome bound to open eEF3 and 2 tRNAs and eEF1A during mRNA decoding	Electron microscopy	3.6	121	2024-12-11
167	7UOO\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae BY4741	Eukarya	RF00001	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state	Electron microscopy	2.34	121	2023-03-15
168	5TGM\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.5	121	2017-01-18
169	7V08\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae BY4741	Eukarya	RF00001	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strain	Electron microscopy	2.36	121	2023-03-15
170	7UQZ\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae BY4741	Eukarya	RF00001	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strain	Electron microscopy	2.44	121	2023-03-15
171	7OHT\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF00001	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population A	Electron microscopy	4.7	114	2021-11-03
172	5JUS\|1\|D	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure III (mid-rotated 40S subunit)	Electron microscopy	4.2	121	2016-10-05
173	5JUO\|1\|D	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)	Electron microscopy	4	121	2016-10-05
174	8BGU\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	human MDM2-5S RNP	Electron microscopy	4.1	121	2023-06-14
175	7OF1\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF00001	Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae	Electron microscopy	3.1	43	2021-11-03
176	6M62\|1\|3	5S ribosomal RNA	RDN5-2 rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.	Electron microscopy	3.2	121	2020-08-26
177	5H4P\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1	Electron microscopy	3.07	121	2017-01-25
178	4V8Y\|1\|B7	5S ribosomal RNA	5S RIBOSOMAL RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex	Electron microscopy	4.3	121	2014-07-09
179	6I7O\|1\|YR	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.	Electron microscopy	5.3	121	2019-01-16
180	6I7O\|1\|BR	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.	Electron microscopy	5.3	121	2019-01-16
181	7BTB\|1\|3	5S ribosomal RNA	RDN5-2 rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)	Electron microscopy	3.22	121	2020-10-28
182	3J6X\|1\|5S	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 5 degree rotation (Class II)	Electron microscopy	6.1	121	2014-06-11
183	3J6Y\|1\|5S	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 2 degree rotation (Class I)	Electron microscopy	6.1	121	2014-06-11
184	3JCT\|1\|3	5S ribosomal RNA	RDN5-2 rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-em structure of eukaryotic pre-60S ribosomal subunits	Electron microscopy	3.08	121	2016-06-01
185	3J77\|1\|5S	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)	Electron microscopy	6.2	121	2014-08-06
186	3J78\|1\|5S	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)	Electron microscopy	6.3	121	2014-08-06
187	4V8Z\|1\|B7	5S ribosomal RNA	5S RIBOSOMAL RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex	Electron microscopy	6.6	121	2014-07-09
188	4V8T\|1\|7	5S ribosomal RNA	5S RIBOSOMAL RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM Structure of the 60S Ribosomal Subunit in Complex with Arx1 and Rei1	Electron microscopy	8.1	121	2014-07-09
189	4V7F\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Arx1 pre-60S particle.	Electron microscopy	8.7	121	2014-07-09
190	5GAK\|1\|3	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5A	Electron microscopy	3.88	121	2016-02-24
191	5JCS\|1\|z	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE	Electron microscopy	9.5	121	2016-11-16
192	4V6I\|1\|DC	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Localization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosome	Electron microscopy	8.8	118	2014-07-09
193	4V7R\|1\|B2	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast 80S ribosome.	X-ray diffraction	4	121	2014-07-09
194	5DAT\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-ray diffraction	3.15	121	2016-08-31
195	5DGV\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.1	121	2016-12-14
196	5DGV\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.1	121	2016-12-14
197	4V7R\|1\|D2	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Yeast 80S ribosome.	X-ray diffraction	4	121	2014-07-09
198	5DAT\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-ray diffraction	3.15	121	2016-08-31
199	5DGF\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.3	121	2016-12-14
200	5DC3\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Complex of yeast 80S ribosome with non-modified eIF5A	X-ray diffraction	3.25	121	2016-06-01
201	5DGE\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-ray diffraction	3.45	121	2017-01-25
202	5DC3\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Complex of yeast 80S ribosome with non-modified eIF5A	X-ray diffraction	3.25	121	2016-06-01
203	5TGA\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.3	121	2016-11-23
204	5DGE\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-ray diffraction	3.45	121	2017-01-25
205	5DGF\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.3	121	2016-12-14
206	5FCI\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of the vacant uL3 W255C mutant 80S yeast ribosome	X-ray diffraction	3.4	121	2016-05-11
207	5TGA\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.3	121	2016-11-23
208	5FCI\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Structure of the vacant uL3 W255C mutant 80S yeast ribosome	X-ray diffraction	3.4	121	2016-05-11
209	8CCS\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex	Electron microscopy	1.97	121	2023-09-20
210	8CIV\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	Electron microscopy	2.47	121	2023-09-20
211	5JUU\|1\|D	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)	Electron microscopy	4	121	2016-10-05
212	6S05\|1\|x	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.9	121	2019-06-26
213	4U3U\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-ray diffraction	2.9	121	2014-10-22
214	4U4R\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-ray diffraction	2.8	121	2014-10-22
215	4U3U\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-ray diffraction	2.9	121	2014-10-22
216	4U4R\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-ray diffraction	2.8	121	2014-10-22
217	4U4Q\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-ray diffraction	3	121	2014-10-22
218	4U4Q\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-ray diffraction	3	121	2014-10-22
219	4U3M\|1\|7	5S ribosomal RNA	5.8s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-ray diffraction	3	121	2014-10-22
220	4U52\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-ray diffraction	3	121	2014-10-22
221	4U3M\|1\|3	5S ribosomal RNA	5.8s rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-ray diffraction	3	121	2014-10-22
222	4U6F\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-ray diffraction	3.1	121	2014-10-22
223	4U4U\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-ray diffraction	3	121	2014-10-22
224	4U52\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-ray diffraction	3	121	2014-10-22
225	4U3N\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-ray diffraction	3.2	121	2014-10-22
226	4U4U\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-ray diffraction	3	121	2014-10-22
227	4U4N\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Edeine bound to the yeast 80S ribosome	X-ray diffraction	3.1	121	2014-10-22
228	4U6F\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-ray diffraction	3.1	121	2014-10-22
229	4U4Z\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-ray diffraction	3.1	121	2014-10-22
230	4U4N\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Edeine bound to the yeast 80S ribosome	X-ray diffraction	3.1	121	2014-10-22
231	4U55\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-ray diffraction	3.2	121	2014-10-22
232	4U50\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-ray diffraction	3.2	121	2014-10-22
233	4U4Z\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-ray diffraction	3.1	121	2014-10-22
234	4U50\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-ray diffraction	3.2	121	2014-10-22
235	4U3N\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-ray diffraction	3.2	121	2014-10-22
236	4U4Y\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-ray diffraction	3.2	121	2014-10-22
237	4U4Y\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-ray diffraction	3.2	121	2014-10-22
238	4U51\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-ray diffraction	3.2	121	2014-10-22
239	4U55\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-ray diffraction	3.2	121	2014-10-22
240	4U53\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-ray diffraction	3.3	121	2014-10-22
241	4U53\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-ray diffraction	3.3	121	2014-10-22
242	4U51\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-ray diffraction	3.2	121	2014-10-22
243	4U56\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-ray diffraction	3.45	121	2014-10-22
244	4U56\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-ray diffraction	3.45	121	2014-10-22
245	4U4O\|1\|7	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-ray diffraction	3.6	121	2014-10-22
246	4U4O\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-ray diffraction	3.6	121	2014-10-22
247	8CDL\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	80S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complex	Electron microscopy	2.72	121	2023-09-20
248	9F58\|1\|b	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Gcn2 dimer bound to the 60S ribosomal subunit	Electron microscopy	3.1	121	2025-03-26
249	8CKU\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarin	Electron microscopy	3.11	121	2023-09-20
250	5T62\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 Complex	Electron microscopy	3.1	121	2017-02-08
251	6QTZ\|1\|x	5S ribosomal RNA	5S rRNA	Saccharomyces cerevisiae	Eukarya	RF00001	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.5	121	2019-06-26
252	8CMJ\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF00001	Translocation intermediate 4 (TI-4*) of 80S S. cerevisiae ribosome with eEF2 in the absence of sordarin	Electron microscopy	3.79	121	2023-09-20

Release history

Release	4.40
Date	2026-05-20

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	4V6I\|1\|DC	Localization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosome	ELECTRON MICROSCOPY	8.8	118
2	4V7R\|1\|D2	Yeast 80S ribosome.	X-RAY DIFFRACTION	4	121
3	4V7R\|1\|B2	Yeast 80S ribosome.	X-RAY DIFFRACTION	4	121
4	7OF1\|1\|3	Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae	ELECTRON MICROSCOPY	3.1	43
5	7Z34\|1\|2	Structure of pre-60S particle bound to DRG1(AFG2)	ELECTRON MICROSCOPY	3.8	121
6	5JCS\|1\|z	CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE	ELECTRON MICROSCOPY	9.5	121
7	8ZHB\|1\|LB	80S ribosome with A/A P/E tRNA and mRNA of WNV	ELECTRON MICROSCOPY	2.6	121
8	8ZGR\|1\|LB	80S ribosome with A/A tRNA and mRNA of WNV	ELECTRON MICROSCOPY	2.7	121
9	8ZHC\|1\|LB	pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV	ELECTRON MICROSCOPY	2.3	121
10	5JUO\|1\|D	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)	ELECTRON MICROSCOPY	4	121
11	5JUS\|1\|D	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure III (mid-rotated 40S subunit)	ELECTRON MICROSCOPY	4.2	121
12	5JUT\|1\|D	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)	ELECTRON MICROSCOPY	4	121
13	5JUU\|1\|D	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)	ELECTRON MICROSCOPY	4	121
14	5JUP\|1\|D	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)	ELECTRON MICROSCOPY	3.5	121
15	8T3B\|1\|A3	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure I	ELECTRON MICROSCOPY	3.08	121
16	8T3E\|1\|A3	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure IV	ELECTRON MICROSCOPY	3.04	121
17	8T3A\|1\|A3	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, sordarin, and hibernating factor Los2	ELECTRON MICROSCOPY	2.86	121
18	8T3D\|1\|A3	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure III	ELECTRON MICROSCOPY	2.95	121
19	8T3F\|1\|A3	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure V	ELECTRON MICROSCOPY	3.09	121
20	8T3C\|1\|A3	Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II	ELECTRON MICROSCOPY	3.86	121
21	8CG8\|1\|BB	Translocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	ELECTRON MICROSCOPY	2.57	121
22	8CIV\|1\|BB	Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	ELECTRON MICROSCOPY	2.47	121
23	8CGN\|1\|BB	Non-rotated 80S S. cerevisiae ribosome with ligands	ELECTRON MICROSCOPY	2.28	121
24	8CDR\|1\|BB	Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	ELECTRON MICROSCOPY	2.04	121
25	8CEH\|1\|BB	Translocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	ELECTRON MICROSCOPY	2.05	121
26	8CCS\|1\|BB	80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex	ELECTRON MICROSCOPY	1.97	121
27	8CF5\|1\|BB	Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	ELECTRON MICROSCOPY	2.71	121
28	8CDL\|1\|BB	80S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complex	ELECTRON MICROSCOPY	2.72	121
29	8CKU\|1\|BB	Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarin	ELECTRON MICROSCOPY	3.11	121
30	8CMJ\|1\|BB	Translocation intermediate 4 (TI-4*) of 80S S. cerevisiae ribosome with eEF2 in the absence of sordarin	ELECTRON MICROSCOPY	3.79	121
31	5M1J\|1\|34	Nonstop ribosomal complex bound with Dom34 and Hbs1	ELECTRON MICROSCOPY	3.3	121
32	9F9S\|1\|M3	Yeast SDD1 Disome with Mbf1	ELECTRON MICROSCOPY	2.9	121
33	6XIR\|1\|3	Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative Stress	ELECTRON MICROSCOPY	3.2	121
34	8XU8\|1\|B	State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation	ELECTRON MICROSCOPY	3.4	121
35	8YLD\|1\|B	State 4a (S4a) of yeast 80S ribosome bound to 2 tRNAs and open eEF3 and eEF2 during translocation	ELECTRON MICROSCOPY	3.9	121
36	8YLR\|1\|B	State 6 (S6) of yeast 80S ribosome bound to 2 tRNAs and eEF2 and eEF3 during tranlocation	ELECTRON MICROSCOPY	3.9	121
37	7ZS5\|1\|3	Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA	ELECTRON MICROSCOPY	3.2	121
38	6HD7\|1\|3	Cryo-EM structure of the ribosome-NatA complex	ELECTRON MICROSCOPY	3.4	121
39	5GAK\|1\|3	Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5A	ELECTRON MICROSCOPY	3.88	121
40	7NRD\|1\|LB	Structure of the yeast Gcn1 bound to a colliding stalled 80S ribosome with MBF1, A/P-tRNA and P/E-tRNA	ELECTRON MICROSCOPY	4.36	121
41	7NRC\|1\|LB	Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A	ELECTRON MICROSCOPY	3.9	121
42	8BQX\|1\|BR	Yeast 80S ribosome in complex with Map1 (conformation 2)	ELECTRON MICROSCOPY	3.8	121
43	8BQD\|1\|BR	Yeast 80S ribosome in complex with Map1 (conformation 1)	ELECTRON MICROSCOPY	3.9	121
44	6TNU\|1\|BR	Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.	ELECTRON MICROSCOPY	3.1	121
45	7B7D\|1\|LB	Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs	ELECTRON MICROSCOPY	3.3	121
46	5OBM\|1\|7	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.4	121
47	5OBM\|1\|3	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.4	121
48	6QT0\|1\|x	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.4	121
49	9DP7\|1\|A3	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) and hygromycin B, Class II	ELECTRON MICROSCOPY	2.38	121
50	8T30\|1\|A3	Hypomethylated yeast 80S bound with cycloheximide, unmodified U2921, mid rotated	ELECTRON MICROSCOPY	2.88	121
51	8T2Y\|1\|A3	Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, PRE	ELECTRON MICROSCOPY	2.2	121
52	8T2X\|1\|A3	Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, A-site tRNA, messenger RNA and eIF5A, PRE	ELECTRON MICROSCOPY	2.46	121
53	6R86\|1\|3	Yeast Vms1-60S ribosomal subunit complex (post-state)	ELECTRON MICROSCOPY	3.4	121
54	6R84\|1\|3	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)	ELECTRON MICROSCOPY	3.6	121
55	6R87\|1\|3	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)	ELECTRON MICROSCOPY	3.4	121
56	6RI5\|1\|x	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.3	121
57	6QTZ\|1\|x	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.5	121
58	6I7O\|1\|YR	The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.	ELECTRON MICROSCOPY	5.3	121
59	6SV4\|1\|ZR	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	121
60	6SV4\|1\|YR	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	121
61	6SV4\|1\|BR	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	121
62	6I7O\|1\|BR	The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.	ELECTRON MICROSCOPY	5.3	121
63	6T83\|1\|Bb	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	ELECTRON MICROSCOPY	4	121
64	6T83\|1\|4b	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	ELECTRON MICROSCOPY	4	121
65	8ZGY\|1\|LB	80S ribosome with P/E tRNA and mRNA of WNV	ELECTRON MICROSCOPY	2.8	121
66	8ZH3\|1\|LB	80S ribosome with A/P-P/E tRNA and mRNA of WNV	ELECTRON MICROSCOPY	2.7	121
67	7AZY\|1\|F	Context-specific inhibition of eukaryotic translation by macrolide antibiotics	ELECTRON MICROSCOPY	2.877	121
68	6Q8Y\|1\|BR	Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complex	ELECTRON MICROSCOPY	3.1	121
69	8EVP\|1\|A3	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure I	ELECTRON MICROSCOPY	2.38	121
70	8EVT\|1\|A3	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) refined against a composite map	ELECTRON MICROSCOPY	2.2	121
71	8EWC\|1\|A3	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure II	ELECTRON MICROSCOPY	2.45	121
72	9DOV\|1\|A3	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) and hygromycin B	ELECTRON MICROSCOPY	2.49	121
73	8EVR\|1\|A3	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II	ELECTRON MICROSCOPY	2.87	121
74	8EVQ\|1\|A3	Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I	ELECTRON MICROSCOPY	2.72	121
75	8EUB\|1\|A3	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure I	ELECTRON MICROSCOPY	2.52	121
76	8EVS\|1\|A3	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure II	ELECTRON MICROSCOPY	2.62	121
77	8EWB\|1\|A3	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure III	ELECTRON MICROSCOPY	2.87	121
78	7MPI\|1\|A3	Stm1 bound vacant 80S structure isolated from cbf5-D95A	ELECTRON MICROSCOPY	3.05	121
79	7N8B\|1\|A3	Cycloheximide bound vacant 80S structure isolated from cbf5-D95A	ELECTRON MICROSCOPY	3.05	121
80	7MPJ\|1\|A3	Stm1 bound vacant 80S structure isolated from nop1-D243A	ELECTRON MICROSCOPY	2.7	121
81	6WOO\|1\|7	CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP	ELECTRON MICROSCOPY	2.9	121
82	8UTI\|1\|B	Eukaryotic 80S ribosome with Reh1 and A/P site tRNA	ELECTRON MICROSCOPY	3.13	121
83	8UT0\|1\|B	Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA	ELECTRON MICROSCOPY	3.22	121
84	5MC6\|1\|BR	Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae	ELECTRON MICROSCOPY	3.8	121
85	4U4O\|1\|7	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.6	121
86	5TGM\|1\|7	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.5	121
87	4U52\|1\|7	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	121
88	5DAT\|1\|7	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-RAY DIFFRACTION	3.15	121
89	5DGF\|1\|7	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.3	121
90	4U6F\|1\|7	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	121
91	5DGV\|1\|7	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.1	121
92	5DGE\|1\|7	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-RAY DIFFRACTION	3.45	121
93	5DC3\|1\|7	Complex of yeast 80S ribosome with non-modified eIF5A	X-RAY DIFFRACTION	3.25	121
94	4U50\|1\|7	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	121
95	4U51\|1\|7	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	121
96	4U53\|1\|7	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	121
97	4U4U\|1\|7	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	121
98	4U4Q\|1\|7	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	121
99	4U4N\|1\|7	Crystal structure of Edeine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	121
100	4U4Z\|1\|7	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	121
101	4U3N\|1\|7	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	121
102	4U55\|1\|7	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	121
103	4U4Y\|1\|7	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	121
104	4V88\|1\|A7	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-RAY DIFFRACTION	3	121
105	4V8Z\|1\|B7	Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex	ELECTRON MICROSCOPY	6.6	121
106	4V8Y\|1\|B7	Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex	ELECTRON MICROSCOPY	4.3	121
107	4V8T\|1\|7	Cryo-EM Structure of the 60S Ribosomal Subunit in Complex with Arx1 and Rei1	ELECTRON MICROSCOPY	8.1	121
108	4U3M\|1\|7	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	121
109	4U4R\|1\|7	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.8	121
110	4U3U\|1\|7	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.9	121
111	5FCJ\|1\|7	Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome	X-RAY DIFFRACTION	3.1	121
112	5I4L\|1\|7	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	121
113	5LYB\|1\|7	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	121
114	5TGA\|1\|7	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.3	121
115	4U56\|1\|7	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.45	121
116	5FCI\|1\|7	Structure of the vacant uL3 W255C mutant 80S yeast ribosome	X-RAY DIFFRACTION	3.4	121
117	8P4V\|1\|AS	80S yeast ribosome in complex with HaterumaimideQ	X-RAY DIFFRACTION	3.16	121
118	8PNN\|1\|AS	80S yeast ribosome in complex with Bromolissoclimide	X-RAY DIFFRACTION	2.9	121
119	5MEI\|1\|AS	Crystal structure of Agelastatin A bound to the 80S ribosome	X-RAY DIFFRACTION	3.5	121
120	5ON6\|1\|AS	Crystal structure of haemanthamine bound to the 80S ribosome	X-RAY DIFFRACTION	3.1	121
121	8P9A\|1\|AS	80S yeast ribosome in complex with Methyllissoclimide	X-RAY DIFFRACTION	2.9	121
122	8P85\|1\|AS	80S yeast ribosome in complex with Fluorolissoclimide	X-RAY DIFFRACTION	2.9	121
123	6HHQ\|1\|AS	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	121
124	5TBW\|1\|AS	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	121
125	5NDW\|1\|7	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	121
126	5NDG\|1\|7	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	121
127	5NDV\|1\|7	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	121
128	7OSA\|1\|AB	Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-RAY DIFFRACTION	3	121
129	7OSM\|1\|AB	Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-RAY DIFFRACTION	3	121
130	9PN5\|1\|A3	Composite map of hypomethylated 80S ribosome treated with hygromycin B	ELECTRON MICROSCOPY	1.75	121
131	8T2Z\|1\|A3	Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, POST	ELECTRON MICROSCOPY	2.4	121
132	7ZUW\|1\|4	Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae	ELECTRON MICROSCOPY	4.3	121
133	5APN\|1\|7	Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1	ELECTRON MICROSCOPY	3.91	121
134	5APO\|1\|7	Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1	ELECTRON MICROSCOPY	3.41	121
135	6Z6J\|1\|C4	Cryo-EM structure of yeast Lso2 bound to 80S ribosomes under native condition	ELECTRON MICROSCOPY	3.4	121
136	6Z6K\|1\|C4	Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomes	ELECTRON MICROSCOPY	3.4	121
137	8K2D\|1\|C4	Cryo-EM structure of the yeast 80S ribosome with tigecycline, eEF2, Stm1 and eIF5A	ELECTRON MICROSCOPY	3.2	121
138	6S47\|1\|AB	Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1	ELECTRON MICROSCOPY	3.28	121
139	8K82\|1\|C4	Cryo-EM structure of the yeast 80S ribosome with tigecycline, Not5 and P-site tRNA	ELECTRON MICROSCOPY	3	121
140	6TB3\|1\|BR	yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complex	ELECTRON MICROSCOPY	2.8	121
141	6T4Q\|1\|C4	Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.	ELECTRON MICROSCOPY	2.6	121
142	6SNT\|1\|4	Yeast 80S ribosome stalled on SDD1 mRNA.	ELECTRON MICROSCOPY	2.8	121
143	6T7I\|1\|C4	Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.	ELECTRON MICROSCOPY	3.2	121
144	6T7T\|1\|C4	Structure of yeast 80S ribosome stalled on poly(A) tract.	ELECTRON MICROSCOPY	3.1	121
145	7ZPQ\|1\|4	Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)	ELECTRON MICROSCOPY	3.47	121
146	9F9S\|1\|L3	Yeast SDD1 Disome with Mbf1	ELECTRON MICROSCOPY	2.9	121
147	7ZRS\|1\|4	Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map	ELECTRON MICROSCOPY	4.8	121
148	9OFV\|1\|h	Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex	ELECTRON MICROSCOPY	3.16	121
149	8AGW\|1\|h	Yeast RQC complex in state D	ELECTRON MICROSCOPY	2.6	121
150	8AAF\|1\|h	Yeast RQC complex in state G	ELECTRON MICROSCOPY	2.5	121
151	8AGX\|1\|h	Yeast RQC complex in state with the RING domain of Ltn1 in the IN position	ELECTRON MICROSCOPY	2.4	121
152	8AGZ\|1\|h	Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position	ELECTRON MICROSCOPY	2.6	121
153	8AGU\|1\|h	Yeast RQC complex in state E	ELECTRON MICROSCOPY	2.7	121
154	8AGT\|1\|h	Yeast RQC complex in state F	ELECTRON MICROSCOPY	2.6	121
155	8AGV\|1\|h	Yeast RQC complex in state H	ELECTRON MICROSCOPY	2.6	121
156	7ZW0\|1\|LC	FAP-80S Complex - Rotated state	ELECTRON MICROSCOPY	2.4	121
157	8BIP\|1\|C4	Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex	ELECTRON MICROSCOPY	3.1	121
158	8BJQ\|1\|C4	Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex	ELECTRON MICROSCOPY	3.8	121
159	8Z71\|1\|B	State 1a (S1a) of yeast 80S ribosome bound to open eEF3 and 2 tRNAs and eEF1A during mRNA decoding	ELECTRON MICROSCOPY	3.6	121
160	8Z70\|1\|B	State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs during mRNA decoding	ELECTRON MICROSCOPY	3.2	121
161	9F58\|1\|b	Gcn2 dimer bound to the 60S ribosomal subunit	ELECTRON MICROSCOPY	3.1	121
162	8BN3\|1\|3	Yeast 80S, ES7s delta, eIF5A, Stm1 containing	ELECTRON MICROSCOPY	2.4	121
163	4U4O\|1\|3	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.6	121
164	5TGM\|1\|3	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.5	121
165	4U56\|1\|3	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.45	121
166	5DAT\|1\|3	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-RAY DIFFRACTION	3.15	121
167	5MEI\|1\|3	Crystal structure of Agelastatin A bound to the 80S ribosome	X-RAY DIFFRACTION	3.5	121
168	8P4V\|1\|3	80S yeast ribosome in complex with HaterumaimideQ	X-RAY DIFFRACTION	3.16	121
169	8PNN\|1\|3	80S yeast ribosome in complex with Bromolissoclimide	X-RAY DIFFRACTION	2.9	121
170	8P85\|1\|3	80S yeast ribosome in complex with Fluorolissoclimide	X-RAY DIFFRACTION	2.9	121
171	8P9A\|1\|3	80S yeast ribosome in complex with Methyllissoclimide	X-RAY DIFFRACTION	2.9	121
172	4U50\|1\|3	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	121
173	4U53\|1\|3	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	121
174	4U6F\|1\|3	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	121
175	4U52\|1\|3	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	121
176	5ON6\|1\|3	Crystal structure of haemanthamine bound to the 80S ribosome	X-RAY DIFFRACTION	3.1	121
177	4U51\|1\|3	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	121
178	4U55\|1\|3	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	121
179	4U4Z\|1\|3	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	121
180	4U4N\|1\|3	Crystal structure of Edeine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	121
181	4U3N\|1\|3	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	121
182	4U4Y\|1\|3	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	121
183	4U3U\|1\|3	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.9	121
184	4V88\|1\|A3	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-RAY DIFFRACTION	3	121
185	4U4R\|1\|3	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.8	121
186	4U3M\|1\|3	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	121
187	4U4U\|1\|3	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	121
188	4U4Q\|1\|3	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	121
189	5TBW\|1\|3	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	121
190	6HHQ\|1\|3	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	121
191	5FCJ\|1\|3	Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome	X-RAY DIFFRACTION	3.1	121
192	5I4L\|1\|3	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	121
193	5TGA\|1\|3	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.3	121
194	5LYB\|1\|3	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	121
195	5DGV\|1\|3	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.1	121
196	5DGF\|1\|3	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.3	121
197	5DGE\|1\|3	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-RAY DIFFRACTION	3.45	121
198	5DC3\|1\|3	Complex of yeast 80S ribosome with non-modified eIF5A	X-RAY DIFFRACTION	3.25	121
199	5FCI\|1\|3	Structure of the vacant uL3 W255C mutant 80S yeast ribosome	X-RAY DIFFRACTION	3.4	121
200	5NDW\|1\|3	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	121
201	5NDG\|1\|3	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	121
202	5NDV\|1\|3	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	121
203	7ZUX\|1\|4	Collided ribosome in a disome unit from S. cerevisiae	ELECTRON MICROSCOPY	2.5	121
204	7TOP\|1\|A5S	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20	ELECTRON MICROSCOPY	2.4	121
205	7TOO\|1\|A5S	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	ELECTRON MICROSCOPY	2.7	121
206	8P8U\|1\|LE	Yeast 60S ribosomal subunit	ELECTRON MICROSCOPY	2.23	121
207	8P8N\|1\|LE	Mouse RPL39 integrated into the yeast 60S ribosomal subunit	ELECTRON MICROSCOPY	2.15	121
208	8PFR\|1\|LE	Mouse RPL39L integrated into the yeast 60S ribosomal subunit	ELECTRON MICROSCOPY	2.15	121
209	8P8M\|1\|LE	Yeast 60S ribosomal subunit, RPL39 deletion	ELECTRON MICROSCOPY	2.66	121
210	9R9O\|1\|C4	Yeast 80S with nascent chain in complex with Ssb1-ADP in the S1 state	ELECTRON MICROSCOPY	2.9	121
211	9R9P\|1\|C4	Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state	ELECTRON MICROSCOPY	3	121
212	7RR5\|1\|C4	Structure of ribosomal complex bound with Rbg1/Tma46	ELECTRON MICROSCOPY	3.23	121
213	8Y0U\|1\|C4	dormant ribosome with STM1	ELECTRON MICROSCOPY	3.59	121
214	6GQ1\|1\|3	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin)	ELECTRON MICROSCOPY	4.4	121
215	6GQB\|1\|3	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)	ELECTRON MICROSCOPY	3.9	121
216	6GQV\|1\|3	Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)	ELECTRON MICROSCOPY	4	121
217	8HFR\|1\|2f	NPC-trapped pre-60S particle	ELECTRON MICROSCOPY	2.64	121
218	6N8K\|1\|2	Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.6	121
219	6N8L\|1\|2	Cryo-EM structure of early cytoplasmic-late (ECL) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.6	121
220	6N8N\|1\|B	Cryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.8	121
221	6N8M\|1\|B	Cryo-EM structure of pre-Lsg1 (PL) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.5	121
222	6N8O\|1\|B	Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.5	121
223	5T6R\|1\|B	Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3 Complex	ELECTRON MICROSCOPY	4.2	121
224	5T62\|1\|B	Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 Complex	ELECTRON MICROSCOPY	3.1	121
225	6RZZ\|1\|x	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.2	121
226	6QIK\|1\|x	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.1	121
227	6S05\|1\|x	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.9	121
228	5H4P\|1\|3	Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1	ELECTRON MICROSCOPY	3.07	121
229	6N8J\|1\|2	Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.5	121
230	3J6X\|1\|5S	S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 5 degree rotation (Class II)	ELECTRON MICROSCOPY	6.1	121
231	3J6Y\|1\|5S	S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 2 degree rotation (Class I)	ELECTRON MICROSCOPY	6.1	121
232	3J77\|1\|5S	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)	ELECTRON MICROSCOPY	6.2	121
233	3J78\|1\|5S	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)	ELECTRON MICROSCOPY	6.3	121
234	3JCT\|1\|3	Cryo-em structure of eukaryotic pre-60S ribosomal subunits	ELECTRON MICROSCOPY	3.08	121
235	7BTB\|1\|3	Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)	ELECTRON MICROSCOPY	3.22	121
236	7UG6\|1\|3	Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922	ELECTRON MICROSCOPY	2.9	121
237	6FT6\|1\|3	Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors	ELECTRON MICROSCOPY	3.9	121
238	6OIG\|1\|7	Subunit joining exposes nascent pre-40S rRNA for processing and quality control	ELECTRON MICROSCOPY	3.8	121
239	6YLG\|1\|3	Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)	ELECTRON MICROSCOPY	3	117
240	6YLH\|1\|3	Rix1-Rea1 pre-60S particle - full composite structure	ELECTRON MICROSCOPY	3.1	117
241	7OH3\|1\|3	Nog1-TAP associated immature ribosomal particle population B from S. cerevisiae	ELECTRON MICROSCOPY	3.4	121
242	7OHT\|1\|3	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population A	ELECTRON MICROSCOPY	4.7	114
243	7OHQ\|1\|3	Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae	ELECTRON MICROSCOPY	3.1	121
244	7UQB\|1\|3	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1-D52A strain with AlF4	ELECTRON MICROSCOPY	2.43	121
245	7V08\|1\|3	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strain	ELECTRON MICROSCOPY	2.36	121
246	7UQZ\|1\|3	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strain	ELECTRON MICROSCOPY	2.44	121
247	7UOO\|1\|3	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state	ELECTRON MICROSCOPY	2.34	121
248	7BT6\|1\|3	Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)	ELECTRON MICROSCOPY	3.12	121
249	6M62\|1\|3	Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.	ELECTRON MICROSCOPY	3.2	121
250	6XIQ\|1\|3	Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress	ELECTRON MICROSCOPY	4.2	121
251	8BGU\|1\|3	human MDM2-5S RNP	ELECTRON MICROSCOPY	4.1	121
252	4V7F\|1\|3	Arx1 pre-60S particle.	ELECTRON MICROSCOPY	8.7	121

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_all_18586.78 Current

Release history

Parents

Children