Equivalence class NR_all_19377.3 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 9F37|1|V+ 9F37|1|R (rep) | 3' end of the vRNA promoter, 5' end of the vRNA promoter | Influenza A virus | Replication-like initiation state of influenza polymerase with GTP and CTP at respectively the -1 and +1 positions (strain A/little yellow-shouldered bat/Guatemala/060/2010/H17N10) | X-ray diffraction | 1.905 | 31 | 2024-09-18 | |||
| 2 | 9F2R|1|V+ 9F2R|1|R | 3' end of the promoter vRNA, 5' end of the promoter vRNA | Influenza A virus | Influenza A/H17N10 polymerase with bound promoter and 3' end of template in active site | X-ray diffraction | 1.959 | 31 | 2024-09-18 | |||
| 3 | 5M3H|1|V+ 5M3H|1|R | RNA (5'-R(*UP*AP*UP*AP*CP*CP*UP*CP*UP*GP*CP*UP*U)-3'), RNA 5'-pAGUAGUAACAAGAGGG | Influenza A virus | Bat influenza A/H17N10 polymerase bound to four heptad repeats of serine 5 phosphorylated Pol II CTD | X-ray diffraction | 2.5 | 29 | 2016-12-21 | |||
| 4 | 6FHH|1|V+ 6FHH|1|R | RNA (5'-R(*UP*AP*UP*AP*CP*CP*UP*CP*UP*GP*CP*UP*U)-3'), RNA (5'-R(P*AP*GP*UP*AP*GP*UP*AP*AP*CP*AP*AP*GP*AP*GP*GP*G)-3') | Influenza A virus | Crystal structure of bat influenza A/H17N10 polymerase with viral RNA promoter bound to a 22-mer modified Pol II CTD peptide with serine 5 thiophosphorylated. | X-ray diffraction | 2.7 | 29 | 2019-01-30 | |||
| 5 | 6FHI|1|V+ 6FHI|1|R | RNA (5'-R(*UP*AP*UP*AP*CP*CP*UP*CP*UP*GP*CP*UP*U)-3'), RNA (5'-R(P*AP*GP*UP*AP*GP*UP*AP*AP*CP*AP*AP*GP*AP*GP*GP*G)-3') | Influenza A virus | Crystal structure of bat influenza A/H17N10 polymerase with viral RNA promoter bound to a 19-mer serine 5 phosphorylated Pol II CTD peptide with a truncated linker. | X-ray diffraction | 2.8 | 29 | 2019-01-30 | |||
| 6 | 6EVK|1|V+ 6EVK|1|R | RNA (5'-R(*UP*AP*UP*AP*CP*CP*UP*CP*UP*GP*CP*UP*U)-3'), RNA (5'-R(P*AP*GP*UP*AP*GP*UP*AP*AP*CP*AP*AP*GP*AP*GP*GP*G)-3') | Influenza A virus | Crystal structure of bat influenza A/H17N10 polymerase with viral RNA promoter and cap analogue m7GTP | X-ray diffraction | 2.9 | 29 | 2017-12-13 | |||
| 7 | 6EVJ|1|V+ 6EVJ|1|R | RNA (5'-R(*UP*AP*UP*AP*CP*CP*UP*CP*UP*GP*CP*UP*U)-3'), RNA (5'-R(P*AP*GP*UP*AP*GP*UP*AP*AP*CP*AP*AP*GP*AP*GP*G)-3') | Influenza A virus | Crystal structure of bat influenza A/H17N10 polymerase with viral RNA promoter and capped RNA primer | X-ray diffraction | 3.9 | 28 | 2017-12-13 | |||
| 8 | 6EVJ|1|U+ 6EVJ|1|S | RNA (5'-R(*UP*AP*UP*AP*CP*CP*UP*CP*UP*GP*CP*UP*U)-3'), RNA (5'-R(P*AP*GP*UP*AP*GP*UP*AP*AP*CP*AP*AP*GP*AP*GP*G)-3') | Influenza A virus | Crystal structure of bat influenza A/H17N10 polymerase with viral RNA promoter and capped RNA primer | X-ray diffraction | 3.9 | 28 | 2017-12-13 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 6EVJ|1|U+ 6EVJ|1|S | Crystal structure of bat influenza A/H17N10 polymerase with viral RNA promoter and capped RNA primer | X-RAY DIFFRACTION | 3.9 | 28 | |
| 2 | 6EVJ|1|V+ 6EVJ|1|R | Crystal structure of bat influenza A/H17N10 polymerase with viral RNA promoter and capped RNA primer | X-RAY DIFFRACTION | 3.9 | 28 | |
| 3 | 6EVK|1|V+ 6EVK|1|R | Crystal structure of bat influenza A/H17N10 polymerase with viral RNA promoter and cap analogue m7GTP | X-RAY DIFFRACTION | 2.9 | 29 | |
| 4 | 5M3H|1|V+ 5M3H|1|R | Bat influenza A/H17N10 polymerase bound to four heptad repeats of serine 5 phosphorylated Pol II CTD | X-RAY DIFFRACTION | 2.5 | 29 | |
| 5 | 6FHH|1|V+ 6FHH|1|R | Crystal structure of bat influenza A/H17N10 polymerase with viral RNA promoter bound to a 22-mer modified Pol II CTD peptide with serine 5 thiophosphorylated. | X-RAY DIFFRACTION | 2.7 | 29 | |
| 6 | 6FHI|1|V+ 6FHI|1|R | Crystal structure of bat influenza A/H17N10 polymerase with viral RNA promoter bound to a 19-mer serine 5 phosphorylated Pol II CTD peptide with a truncated linker. | X-RAY DIFFRACTION | 2.8 | 29 | |
| 7 | 9F37|1|V+ 9F37|1|R | Replication-like initiation state of influenza polymerase with GTP and CTP at respectively the -1 and +1 positions (strain A/little yellow-shouldered bat/Guatemala/060/2010/H17N10) | X-RAY DIFFRACTION | 1.905 | 31 | |
| 8 | 9F2R|1|V+ 9F2R|1|R | Influenza A/H17N10 polymerase with bound promoter and 3' end of template in active site | X-RAY DIFFRACTION | 1.959 | 31 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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