Equivalence class NR_all_19551.5 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6GAZ|1|AA (rep) | Small subunit ribosomal RNA | 12S ribosomal RNA, mitochondrial | Sus scrofa | Mitochondria | RF00177 | Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 28S ribosomal subunit. | Electron microscopy | 3.1 | 2018-08-08 |
| 2 | 6GAW|1|AA | Small subunit ribosomal RNA | 12S ribosomal RNA, mitochondrial | Sus scrofa | Mitochondria | RF00177 | Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome. | Electron microscopy | 3.2 | 2018-08-22 |
| 3 | 7NQL|1|AA | Small subunit ribosomal RNA | 12S rRNA | Sus scrofa | Mitochondria | RF00177 | 55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet | Electron microscopy | 3.4 | 2021-05-05 |
| 4 | 7NQH|1|AA | Small subunit ribosomal RNA | 12S rRNA | Sus scrofa | Mitochondria | RF00177 | 55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet | Electron microscopy | 3.5 | 2021-05-05 |
| 5 | 5AJ3|1|A | Small subunit ribosomal RNA | MITORIBOSOMAL 12S RRNA | Sus scrofa | Mitochondria | RF00177 | Structure of the small subunit of the mammalian mitoribosome | Electron microscopy | 3.6 | 2015-04-22 |
| 6 | 7NSJ|1|AA | Small subunit ribosomal RNA | 12S rRNA | Sus scrofa | Mitochondria | RF00177 | 55S mammalian mitochondrial ribosome with tRNA(P/P) and tRNA(E*) | Electron microscopy | 3.9 | 2021-06-02 |
| 7 | 5AJ4|1|AA | Small subunit ribosomal RNA | MITORIBOSOMAL 12S Ribosomal RNA | Sus scrofa | Mitochondria | RF00177 | Structure of the 55S mammalian mitoribosome. | Electron microscopy | 3.8 | 2015-04-22 |
| 8 | 7NSI|1|AA | Small subunit ribosomal RNA | 12S rRNA | Sus scrofa | Mitochondria | RF00177 | 55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E) | Electron microscopy | 4.6 | 2021-06-02 |
Release history
| Release | 3.181 | 3.182 | 3.183 | 3.184 | 3.185 | 3.186 | 3.187 | 3.188 | 3.189 | 3.190 | 3.191 | 3.192 | 3.193 | 3.194 | 3.195 | 3.196 | 3.197 | 3.198 | 3.199 | 3.200 | 3.201 | 3.202 | 3.203 | 3.204 | 3.205 | 3.206 | 3.207 | 3.208 | 3.209 | 3.210 | 3.211 | 3.212 | 3.213 | 3.214 | 3.215 | 3.216 | 3.217 | 3.218 | 3.219 | 3.220 | 3.221 | 3.222 | 3.223 | 3.224 | 3.225 | 3.226 | 3.227 | 3.228 | 3.229 | 3.230 | 3.231 | 3.232 | 3.233 | 3.234 | 3.235 | 3.236 | 3.237 | 3.238 | 3.239 | 3.240 | 3.241 | 3.242 | 3.243 | 3.244 | 3.245 | 3.246 | 3.247 | 3.248 | 3.249 | 3.250 | 3.251 | 3.252 | 3.253 | 3.254 | 3.255 | 3.256 | 3.257 | 3.258 | 3.259 | 3.260 | 3.261 | 3.262 | 3.263 | 3.264 | 3.265 | 3.266 | 3.267 | 3.268 | 3.269 | 3.270 | 3.271 | 3.272 | 3.273 | 3.274 | 3.275 | 3.276 | 3.277 | 3.278 | 3.279 | 3.280 | 3.281 | 3.282 | 3.283 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2021-06-02 | 2021-06-09 | 2021-06-16 | 2021-06-23 | 2021-06-30 | 2021-07-07 | 2021-07-14 | 2021-07-21 | 2021-07-28 | 2021-08-04 | 2021-08-11 | 2021-08-18 | 2021-08-25 | 2021-09-01 | 2021-09-08 | 2021-09-15 | 2021-09-22 | 2021-09-29 | 2021-10-06 | 2021-10-13 | 2021-10-20 | 2021-10-27 | 2021-11-03 | 2021-11-10 | 2021-11-17 | 2021-11-24 | 2021-12-01 | 2021-12-08 | 2021-12-15 | 2021-12-22 | 2021-12-29 | 2022-01-05 | 2022-01-12 | 2022-01-19 | 2022-01-26 | 2022-02-02 | 2022-02-09 | 2022-02-16 | 2022-02-23 | 2022-03-02 | 2022-03-09 | 2022-03-16 | 2022-03-23 | 2022-03-30 | 2022-04-06 | 2022-04-13 | 2022-04-20 | 2022-04-27 | 2022-05-04 | 2022-05-11 | 2022-05-18 | 2022-05-25 | 2022-06-01 | 2022-06-08 | 2022-06-15 | 2022-06-22 | 2022-06-29 | 2022-07-06 | 2022-07-13 | 2022-07-20 | 2022-07-27 | 2022-08-03 | 2022-08-10 | 2022-08-17 | 2022-08-24 | 2022-08-31 | 2022-09-07 | 2022-09-14 | 2022-09-21 | 2022-09-28 | 2022-10-05 | 2022-10-12 | 2022-10-19 | 2022-10-26 | 2022-11-02 | 2022-11-09 | 2022-11-16 | 2022-11-23 | 2022-11-30 | 2022-12-07 | 2022-12-14 | 2022-12-21 | 2022-12-28 | 2023-01-04 | 2023-01-11 | 2023-01-18 | 2023-01-25 | 2023-02-01 | 2023-02-08 | 2023-02-15 | 2023-02-22 | 2023-03-01 | 2023-03-08 | 2023-03-15 | 2023-03-22 | 2023-03-29 | 2023-04-05 | 2023-04-12 | 2023-04-19 | 2023-04-26 | 2023-05-03 | 2023-05-10 | 2023-05-17 |
Parents
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 7NSI|1|AA | 55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E) | ELECTRON MICROSCOPY | 4.6 | 960 | |
| 2 | 7NQL|1|AA | 55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet | ELECTRON MICROSCOPY | 3.4 | 960 | |
| 3 | 7NSJ|1|AA | 55S mammalian mitochondrial ribosome with tRNA(P/P) and tRNA(E*) | ELECTRON MICROSCOPY | 3.9 | 960 | |
| 4 | 7NQH|1|AA | 55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet | ELECTRON MICROSCOPY | 3.5 | 960 | |
| 5 | 6GAW|1|AA | Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome. | ELECTRON MICROSCOPY | 3.2 | 960 | |
| 6 | 6GAZ|1|AA | Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 28S ribosomal subunit. | ELECTRON MICROSCOPY | 3.1 | 960 | |
| 7 | 5AJ3|1|A | Structure of the small subunit of the mammalian mitoribosome | ELECTRON MICROSCOPY | 3.6 | 960 | |
| 8 | 5AJ4|1|AA | Structure of the 55S mammalian mitoribosome. | ELECTRON MICROSCOPY | 3.8 | 960 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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