Equivalence class NR_all_20585.3 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6ORD|1|QY (rep) | Transfer RNA | A-site tRNAAla(GGC) U32-A38, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site | X-ray diffraction | 3.1 | 2020-06-24 |
| 2 | 6ORD|1|XY | Transfer RNA | A-site tRNAAla(GGC) U32-A38, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site | X-ray diffraction | 3.1 | 2020-06-24 |
| 3 | 6OJ2|1|XY | Transfer RNA | A-site tRNAAla(GGC), mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site | X-ray diffraction | 3.2 | 2020-06-24 |
| 4 | 6OPE|1|QY | Transfer RNA | A-site tRNAAla(GGC) U32-A38, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site | X-ray diffraction | 3.1 | 2020-06-24 |
| 5 | 8PKL|1|Y | Transfer RNA | mRNA, tRNA-Ala (A-site) | Escherichia coli | Bacteria | RF00005 | Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state) | Electron microscopy | 3.09 | 2024-03-06 |
| 6 | 6OPE|1|XY | Transfer RNA | A-site tRNAAla(GGC) U32-A38, mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site | X-ray diffraction | 3.1 | 2020-06-24 |
| 7 | 6OJ2|1|XW | Transfer RNA | E-site tRNAAla(GGC) | Escherichia coli | Bacteria | RF00005 | Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site | X-ray diffraction | 3.2 | 2020-06-24 |
| 8 | 6OF6|1|XY | Transfer RNA | A-site tRNAAla(GGC), mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site | X-ray diffraction | 3.2 | 2020-06-24 |
| 9 | 6OJ2|1|QY | Transfer RNA | A-site tRNAAla(GGC), mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site | X-ray diffraction | 3.2 | 2020-06-24 |
| 10 | 6OF6|1|QY | Transfer RNA | A-site tRNAAla(GGC), mRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site | X-ray diffraction | 3.2 | 2020-06-24 |
| 11 | 6OJ2|1|QW | Transfer RNA | E-site tRNAAla(GGC) | Escherichia coli | Bacteria | RF00005 | Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site | X-ray diffraction | 3.2 | 2020-06-24 |
| 12 | 6OF6|1|QW | Transfer RNA | E-site tRNAAla(GGC) | Escherichia coli | Bacteria | RF00005 | Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site | X-ray diffraction | 3.2 | 2020-06-24 |
| 13 | 8R3V|1|Y2 | Transfer RNA | messenger RNA, tRNA-Ala (A-site) | Escherichia coli | Bacteria | RF00005 | Escherichia coli paused disome complex (non-rotated disome interface) | Electron microscopy | 3.28 | 2024-03-06 |
| 14 | 8RCL|1|Y2 | Transfer RNA | messenger RNA, tRNA-Ala (A-site) | Escherichia coli | Bacteria | RF00005 | Escherichia coli paused disome complex (Non-rotated disome interface class 1) | Electron microscopy | 3.49 | 2024-03-13 |
| 15 | 6OF6|1|XW | Transfer RNA | E-site tRNAAla(GGC) | Escherichia coli | Bacteria | RF00005 | Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site | X-ray diffraction | 3.2 | 2020-06-24 |
| 16 | 8RCM|1|Y2 | Transfer RNA | messenger RNA, tRNA-Ala (A-site) | Escherichia coli | Bacteria | RF00005 | Escherichia coli paused disome complex (Non-rotated disome interface class 2) | Electron microscopy | 3.59 | 2024-03-06 |
| 17 | 8RCS|1|Y | Transfer RNA | messenger RNA, tRNA-Ala (A/P-site) | Escherichia coli | Bacteria | RF00005 | Escherichia coli paused disome complex (Rotated disome interface class 1) | Electron microscopy | 4.46 | 2024-03-06 |
| 18 | 8RCT|1|Y | Transfer RNA | messenger RNA, tRNA-Ala (A/P-site) | Escherichia coli | Bacteria | RF00005 | Escherichia coli paused disome complex (Rotated disome interface class 2) | Electron microscopy | 5.32 | 2024-03-06 |
Release history
| Release | 3.326 | 3.327 | 3.328 | 3.329 | 3.330 | 3.331 | 3.332 | 3.333 | 3.334 | 3.335 | 3.336 | 3.337 | 3.338 | 3.339 | 3.340 | 3.341 | 3.342 | 3.343 | 3.344 | 3.345 | 3.346 | 3.347 | 3.348 | 3.349 | 3.350 | 3.351 | 3.352 | 3.353 | 3.354 | 3.355 | 3.356 | 3.357 | 3.358 | 3.359 | 3.360 | 3.361 | 3.362 | 3.363 | 3.364 | 3.365 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-03-13 | 2024-03-20 | 2024-03-27 | 2024-04-03 | 2024-04-10 | 2024-04-17 | 2024-04-24 | 2024-05-01 | 2024-05-08 | 2024-05-15 | 2024-05-22 | 2024-05-29 | 2024-06-05 | 2024-06-12 | 2024-06-19 | 2024-06-26 | 2024-07-03 | 2024-07-10 | 2024-07-17 | 2024-07-25 | 2024-07-31 | 2024-08-07 | 2024-08-14 | 2024-08-21 | 2024-08-28 | 2024-09-04 | 2024-09-11 | 2024-09-18 | 2024-09-25 | 2024-10-02 | 2024-10-09 | 2024-10-16 | 2024-10-23 | 2024-10-30 | 2024-11-06 | 2024-11-13 | 2024-11-20 | 2024-11-27 | 2024-12-04 | 2024-12-11 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 8RCT|1|Y | Escherichia coli paused disome complex (Rotated disome interface class 2) | ELECTRON MICROSCOPY | 5.32 | 72 | |
| 2 | 8RCS|1|Y | Escherichia coli paused disome complex (Rotated disome interface class 1) | ELECTRON MICROSCOPY | 4.46 | 72 | |
| 3 | 8PKL|1|Y | Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state) | ELECTRON MICROSCOPY | 3.09 | 72 | |
| 4 | 8R3V|1|Y2 | Escherichia coli paused disome complex (non-rotated disome interface) | ELECTRON MICROSCOPY | 3.28 | 72 | |
| 5 | 8RCL|1|Y2 | Escherichia coli paused disome complex (Non-rotated disome interface class 1) | ELECTRON MICROSCOPY | 3.49 | 72 | |
| 6 | 8RCM|1|Y2 | Escherichia coli paused disome complex (Non-rotated disome interface class 2) | ELECTRON MICROSCOPY | 3.59 | 72 | |
| 7 | 6ORD|1|QY | Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site | X-RAY DIFFRACTION | 3.1 | 76 | |
| 8 | 6ORD|1|XY | Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site | X-RAY DIFFRACTION | 3.1 | 76 | |
| 9 | 6OJ2|1|XY | Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site | X-RAY DIFFRACTION | 3.2 | 76 | |
| 10 | 6OF6|1|XY | Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site | X-RAY DIFFRACTION | 3.2 | 75 | |
| 11 | 6OPE|1|XY | Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site | X-RAY DIFFRACTION | 3.1 | 75 | |
| 12 | 6OPE|1|QY | Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site | X-RAY DIFFRACTION | 3.1 | 75 | |
| 13 | 6OJ2|1|QY | Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site | X-RAY DIFFRACTION | 3.2 | 75 | |
| 14 | 6OF6|1|QY | Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site | X-RAY DIFFRACTION | 3.2 | 76 | |
| 15 | 6OF6|1|QW | Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site | X-RAY DIFFRACTION | 3.2 | 76 | |
| 16 | 6OJ2|1|QW | Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site | X-RAY DIFFRACTION | 3.2 | 76 | |
| 17 | 6OJ2|1|XW | Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site | X-RAY DIFFRACTION | 3.2 | 76 | |
| 18 | 6OF6|1|XW | Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site | X-RAY DIFFRACTION | 3.2 | 76 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: