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Equivalence class NR_all_21736.1 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
14OQ9|1|z (rep)RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.4522014-09-10
24NIA|1|1RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.8222014-09-10
34OQ9|1|1RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.4522014-09-10
44NIA|1|2RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.8222014-09-10
54OQ9|1|2RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.4522014-09-10
64NIA|1|3RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.8222014-09-10
74OQ9|1|3RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.4522014-09-10
84NIA|1|4RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.8222014-09-10
94OQ9|1|4RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.4522014-09-10
104NIA|1|5RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.8222014-09-10
114OQ9|1|5RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.4522014-09-10
124NIA|1|6RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.8222014-09-10
134OQ9|1|6RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.4522014-09-10
144NIA|1|7RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.8222014-09-10
154OQ9|1|7RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.4522014-09-10
164NIA|1|8RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.8222014-09-10
174OQ9|1|8RNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.4522014-09-10
183ER9|1|D5'-R(UP*U)-3'Crystal structure of the heterodimeric vaccinia virus mRNA polyadenylate polymerase complex with UU and 3'-deoxy ATPX-ray diffraction2.0622009-06-16
194OQ8|1|DRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using icosahedral constraintsX-ray diffraction1.4522014-09-10
201DDL|1|ERNA (5'-R(P*UP*U)-3')DESMODIUM YELLOW MOTTLE TYMOVIRUSX-ray diffraction2.722000-10-30
214NIA|1|tRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.8222014-09-10
224OQ9|1|tRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.4522014-09-10
234NIA|1|uRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.8222014-09-10
244OQ9|1|uRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.4522014-09-10
254NIA|1|vRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.8222014-09-10
264OQ9|1|vRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.4522014-09-10
274NIA|1|wRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.8222014-09-10
284OQ9|1|wRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.4522014-09-10
294NIA|1|xRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.8222014-09-10
304OQ9|1|xRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.4522014-09-10
314NIA|1|yRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.8222014-09-10
324OQ9|1|yRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.4522014-09-10
334NIA|1|zRNA (5'-R(P*UP*U)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.8222014-09-10

Release history

Release2.02.12.22.32.42.52.62.72.82.92.102.112.122.132.142.152.162.172.182.192.202.212.222.232.242.252.262.272.282.292.302.312.322.332.342.352.362.372.382.392.402.412.422.432.442.45
Date2014-12-052014-12-122014-12-192014-12-262015-01-022015-01-092015-01-162015-01-232015-01-302015-02-062015-02-132015-02-202015-02-272015-03-062015-03-132015-03-202015-03-272015-04-032015-04-102015-04-172015-04-242015-05-012015-05-082015-05-152015-05-222015-05-292015-06-052015-06-122015-06-192015-06-262015-07-032015-07-102015-07-172015-07-242015-07-312015-08-072015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-092015-10-16

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_21736.1NR_1.5_21736.22.46(16) 4OQ8|1|D, 4OQ9|1|1, 4OQ9|1|2, 4OQ9|1|3, 4OQ9|1|4, 4OQ9|1|5, 4OQ9|1|6, 4OQ9|1|7, 4OQ9|1|8, 4OQ9|1|t, 4OQ9|1|u, 4OQ9|1|v, 4OQ9|1|w, 4OQ9|1|x, 4OQ9|1|y, 4OQ9|1|z(17) 1DDL|1|E, 3ER9|1|D, 4NIA|1|1, 4NIA|1|2, 4NIA|1|3, 4NIA|1|4, 4NIA|1|5, 4NIA|1|6, 4NIA|1|7, 4NIA|1|8, 4NIA|1|t, 4NIA|1|u, 4NIA|1|v, 4NIA|1|w, 4NIA|1|x, 4NIA|1|y, 4NIA|1|z(0)
NR_all_21736.1NR_2.0_21736.22.46(31) 4NIA|1|1, 4NIA|1|2, 4NIA|1|3, 4NIA|1|4, 4NIA|1|5, 4NIA|1|6, 4NIA|1|7, 4NIA|1|8, 4NIA|1|t, 4NIA|1|u, 4NIA|1|v, 4NIA|1|w, 4NIA|1|x, 4NIA|1|y, 4NIA|1|z, 4OQ8|1|D, 4OQ9|1|1, 4OQ9|1|2, 4OQ9|1|3, 4OQ9|1|4, 4OQ9|1|5, 4OQ9|1|6, 4OQ9|1|7, 4OQ9|1|8, 4OQ9|1|t, 4OQ9|1|u, 4OQ9|1|v, 4OQ9|1|w, 4OQ9|1|x, 4OQ9|1|y, 4OQ9|1|z(2) 1DDL|1|E, 3ER9|1|D(0)
NR_all_21736.1NR_2.5_21736.22.46(32) 3ER9|1|D, 4NIA|1|1, 4NIA|1|2, 4NIA|1|3, 4NIA|1|4, 4NIA|1|5, 4NIA|1|6, 4NIA|1|7, 4NIA|1|8, 4NIA|1|t, 4NIA|1|u, 4NIA|1|v, 4NIA|1|w, 4NIA|1|x, 4NIA|1|y, 4NIA|1|z, 4OQ8|1|D, 4OQ9|1|1, 4OQ9|1|2, 4OQ9|1|3, 4OQ9|1|4, 4OQ9|1|5, 4OQ9|1|6, 4OQ9|1|7, 4OQ9|1|8, 4OQ9|1|t, 4OQ9|1|u, 4OQ9|1|v, 4OQ9|1|w, 4OQ9|1|x, 4OQ9|1|y, 4OQ9|1|z(1) 1DDL|1|E(0)
NR_all_21736.1NR_20.0_21736.22.46(33) 1DDL|1|E, 3ER9|1|D, 4NIA|1|1, 4NIA|1|2, 4NIA|1|3, 4NIA|1|4, 4NIA|1|5, 4NIA|1|6, 4NIA|1|7, 4NIA|1|8, 4NIA|1|t, 4NIA|1|u, 4NIA|1|v, 4NIA|1|w, 4NIA|1|x, 4NIA|1|y, 4NIA|1|z, 4OQ8|1|D, 4OQ9|1|1, 4OQ9|1|2, 4OQ9|1|3, 4OQ9|1|4, 4OQ9|1|5, 4OQ9|1|6, 4OQ9|1|7, 4OQ9|1|8, 4OQ9|1|t, 4OQ9|1|u, 4OQ9|1|v, 4OQ9|1|w, 4OQ9|1|x, 4OQ9|1|y, 4OQ9|1|z(0) (2) 2VRT|1|E, 2VRT|1|F
NR_all_21736.1NR_3.0_21736.22.46(33) 1DDL|1|E, 3ER9|1|D, 4NIA|1|1, 4NIA|1|2, 4NIA|1|3, 4NIA|1|4, 4NIA|1|5, 4NIA|1|6, 4NIA|1|7, 4NIA|1|8, 4NIA|1|t, 4NIA|1|u, 4NIA|1|v, 4NIA|1|w, 4NIA|1|x, 4NIA|1|y, 4NIA|1|z, 4OQ8|1|D, 4OQ9|1|1, 4OQ9|1|2, 4OQ9|1|3, 4OQ9|1|4, 4OQ9|1|5, 4OQ9|1|6, 4OQ9|1|7, 4OQ9|1|8, 4OQ9|1|t, 4OQ9|1|u, 4OQ9|1|v, 4OQ9|1|w, 4OQ9|1|x, 4OQ9|1|y, 4OQ9|1|z(0) (0)
NR_all_21736.1NR_3.5_21736.22.46(33) 1DDL|1|E, 3ER9|1|D, 4NIA|1|1, 4NIA|1|2, 4NIA|1|3, 4NIA|1|4, 4NIA|1|5, 4NIA|1|6, 4NIA|1|7, 4NIA|1|8, 4NIA|1|t, 4NIA|1|u, 4NIA|1|v, 4NIA|1|w, 4NIA|1|x, 4NIA|1|y, 4NIA|1|z, 4OQ8|1|D, 4OQ9|1|1, 4OQ9|1|2, 4OQ9|1|3, 4OQ9|1|4, 4OQ9|1|5, 4OQ9|1|6, 4OQ9|1|7, 4OQ9|1|8, 4OQ9|1|t, 4OQ9|1|u, 4OQ9|1|v, 4OQ9|1|w, 4OQ9|1|x, 4OQ9|1|y, 4OQ9|1|z(0) (2) 2VRT|1|E, 2VRT|1|F
NR_all_21736.1NR_4.0_21736.22.46(33) 1DDL|1|E, 3ER9|1|D, 4NIA|1|1, 4NIA|1|2, 4NIA|1|3, 4NIA|1|4, 4NIA|1|5, 4NIA|1|6, 4NIA|1|7, 4NIA|1|8, 4NIA|1|t, 4NIA|1|u, 4NIA|1|v, 4NIA|1|w, 4NIA|1|x, 4NIA|1|y, 4NIA|1|z, 4OQ8|1|D, 4OQ9|1|1, 4OQ9|1|2, 4OQ9|1|3, 4OQ9|1|4, 4OQ9|1|5, 4OQ9|1|6, 4OQ9|1|7, 4OQ9|1|8, 4OQ9|1|t, 4OQ9|1|u, 4OQ9|1|v, 4OQ9|1|w, 4OQ9|1|x, 4OQ9|1|y, 4OQ9|1|z(0) (2) 2VRT|1|E, 2VRT|1|F
NR_all_21736.1NR_all_21736.22.46(33) 1DDL|1|E, 3ER9|1|D, 4NIA|1|1, 4NIA|1|2, 4NIA|1|3, 4NIA|1|4, 4NIA|1|5, 4NIA|1|6, 4NIA|1|7, 4NIA|1|8, 4NIA|1|t, 4NIA|1|u, 4NIA|1|v, 4NIA|1|w, 4NIA|1|x, 4NIA|1|y, 4NIA|1|z, 4OQ8|1|D, 4OQ9|1|1, 4OQ9|1|2, 4OQ9|1|3, 4OQ9|1|4, 4OQ9|1|5, 4OQ9|1|6, 4OQ9|1|7, 4OQ9|1|8, 4OQ9|1|t, 4OQ9|1|u, 4OQ9|1|v, 4OQ9|1|w, 4OQ9|1|x, 4OQ9|1|y, 4OQ9|1|z(0) (2) 2VRT|1|E, 2VRT|1|F

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
14NIA|1|6Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
24NIA|1|5Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
34OQ9|1|6Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
43ER9|1|DCrystal structure of the heterodimeric vaccinia virus mRNA polyadenylate polymerase complex with UU and 3'-deoxy ATPX-RAY DIFFRACTION2.062
54OQ9|1|uSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
64OQ9|1|ySatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
74OQ9|1|7Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
84NIA|1|uSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
94OQ9|1|8Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
104NIA|1|ySatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
114NIA|1|8Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
124NIA|1|7Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
131DDL|1|EDESMODIUM YELLOW MOTTLE TYMOVIRUSX-RAY DIFFRACTION2.72
144OQ9|1|1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
154OQ9|1|zSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
164OQ9|1|4Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
174NIA|1|zSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
184NIA|1|1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
194OQ9|1|5Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
204NIA|1|4Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
214NIA|1|tSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
224OQ9|1|2Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
234OQ9|1|tSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
244OQ9|1|xSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
254NIA|1|xSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
264NIA|1|2Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
274OQ8|1|DSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using icosahedral constraintsX-RAY DIFFRACTION1.452
284NIA|1|wSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
294OQ9|1|vSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
304OQ9|1|3Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
314OQ9|1|wSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452
324NIA|1|3Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822
334NIA|1|vSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

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