RNA 3D Hub //

Equivalence class NR_all_25623.2 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
19L0R|1|G (rep)Giant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA dodecamerElectron microscopy4.726452025-03-19
29L0R|1|CGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA dodecamerElectron microscopy4.726452025-03-19
39L0R|1|BGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA dodecamerElectron microscopy4.726452025-03-19
49L0R|1|DGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA dodecamerElectron microscopy4.726452025-03-19
59L0R|1|JGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA dodecamerElectron microscopy4.726452025-03-19
69L0R|1|LGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA dodecamerElectron microscopy4.726452025-03-19
79L0R|1|AGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA dodecamerElectron microscopy4.726452025-03-19
89L0R|1|KGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA dodecamerElectron microscopy4.726452025-03-19
99L0R|1|FGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA dodecamerElectron microscopy4.726452025-03-19
109L0R|1|IGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA dodecamerElectron microscopy4.726452025-03-19
119L0R|1|EGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA dodecamerElectron microscopy4.726452025-03-19
129L0R|1|HGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA dodecamerElectron microscopy4.726452025-03-19
139LMF|1|AGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA 3' domain decamerElectron microscopy3.933172025-03-19
149LMF|1|FGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA 3' domain decamerElectron microscopy3.933172025-03-19
159LMF|1|JGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA 3' domain decamerElectron microscopy3.933172025-03-19
169LMF|1|BGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA 3' domain decamerElectron microscopy3.933172025-03-19
179LMF|1|HGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA 3' domain decamerElectron microscopy3.933172025-03-19
189LMF|1|GGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA 3' domain decamerElectron microscopy3.933172025-03-19
199LMF|1|IGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA 3' domain decamerElectron microscopy3.933172025-03-19
209LMF|1|EGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA 3' domain decamerElectron microscopy3.933172025-03-19
219LMF|1|DGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA 3' domain decamerElectron microscopy3.933172025-03-19
229LMF|1|CGiant, ornate, lake- and Lactobacillales-derived (GOLLD) RNARNA (700-MER)Streptococcus agalactiaeBacteriaRF02032Streptococcus agalactiae GOLLD RNA 3' domain decamerElectron microscopy3.933172025-03-19

Release history

Release4.0
Date2025-08-13

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
19LMF|1|BStreptococcus agalactiae GOLLD RNA 3' domain decamerELECTRON MICROSCOPY3.93317
29LMF|1|GStreptococcus agalactiae GOLLD RNA 3' domain decamerELECTRON MICROSCOPY3.93317
39LMF|1|JStreptococcus agalactiae GOLLD RNA 3' domain decamerELECTRON MICROSCOPY3.93317
49LMF|1|CStreptococcus agalactiae GOLLD RNA 3' domain decamerELECTRON MICROSCOPY3.93317
59LMF|1|EStreptococcus agalactiae GOLLD RNA 3' domain decamerELECTRON MICROSCOPY3.93317
69LMF|1|DStreptococcus agalactiae GOLLD RNA 3' domain decamerELECTRON MICROSCOPY3.93317
79LMF|1|FStreptococcus agalactiae GOLLD RNA 3' domain decamerELECTRON MICROSCOPY3.93317
89LMF|1|IStreptococcus agalactiae GOLLD RNA 3' domain decamerELECTRON MICROSCOPY3.93317
99LMF|1|AStreptococcus agalactiae GOLLD RNA 3' domain decamerELECTRON MICROSCOPY3.93317
109LMF|1|HStreptococcus agalactiae GOLLD RNA 3' domain decamerELECTRON MICROSCOPY3.93317
119L0R|1|GStreptococcus agalactiae GOLLD RNA dodecamerELECTRON MICROSCOPY4.72645
129L0R|1|CStreptococcus agalactiae GOLLD RNA dodecamerELECTRON MICROSCOPY4.72645
139L0R|1|LStreptococcus agalactiae GOLLD RNA dodecamerELECTRON MICROSCOPY4.72645
149L0R|1|HStreptococcus agalactiae GOLLD RNA dodecamerELECTRON MICROSCOPY4.72645
159L0R|1|KStreptococcus agalactiae GOLLD RNA dodecamerELECTRON MICROSCOPY4.72645
169L0R|1|IStreptococcus agalactiae GOLLD RNA dodecamerELECTRON MICROSCOPY4.72645
179L0R|1|BStreptococcus agalactiae GOLLD RNA dodecamerELECTRON MICROSCOPY4.72645
189L0R|1|JStreptococcus agalactiae GOLLD RNA dodecamerELECTRON MICROSCOPY4.72645
199L0R|1|AStreptococcus agalactiae GOLLD RNA dodecamerELECTRON MICROSCOPY4.72645
209L0R|1|FStreptococcus agalactiae GOLLD RNA dodecamerELECTRON MICROSCOPY4.72645
219L0R|1|EStreptococcus agalactiae GOLLD RNA dodecamerELECTRON MICROSCOPY4.72645
229L0R|1|DStreptococcus agalactiae GOLLD RNA dodecamerELECTRON MICROSCOPY4.72645

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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