RNA 3D Hub //

Equivalence class NR_all_31877.1 Obsolete

Showing 1 to 4 of 4 entries
#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
19G9B|1|R (rep)RNA (35-MER)Enterococcus italicus DSM 15952CryoEM structure of Enterococcus italicus Csm-crRNA (4.3) complexElectron microscopy3.07352025-01-29
29G9A|1|RRNA (30-MER)Enterococcus italicus DSM 15952CryoEM structure of Enterococcus italicus Csm-crRNA (3.2 complex)Electron microscopy2.83252025-01-29
39G9E|1|RRNA (28-MER)Enterococcus italicus DSM 15952CryoEM structure of Enterococcus italicus Csm-crRNA complex bound to AMPNPPElectron microscopy2.87252025-01-29
49G9J|1|RcrRNAEnterococcus italicus DSM 15952CryoEM structure of Enterococcus italicus Csm-crRNA complex bound to pNppA3 and AMPNPPElectron microscopy3.05252025-01-29

Release history

Release3.3723.3733.3743.3753.3763.377
Date2025-01-292025-02-052025-02-122025-02-192025-02-262025-03-05

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

Showing 1 to 4 of 4 entries
#SViewPDBTitleMethodResolution#NTs
19G9A|1|RCryoEM structure of Enterococcus italicus Csm-crRNA (3.2 complex)ELECTRON MICROSCOPY2.8325
29G9E|1|RCryoEM structure of Enterococcus italicus Csm-crRNA complex bound to AMPNPPELECTRON MICROSCOPY2.8725
39G9J|1|RCryoEM structure of Enterococcus italicus Csm-crRNA complex bound to pNppA3 and AMPNPPELECTRON MICROSCOPY3.0525
49G9B|1|RCryoEM structure of Enterococcus italicus Csm-crRNA (4.3) complexELECTRON MICROSCOPY3.0735

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

9G9A|1|R:9G9A|1|R = 09G9A|1|R:9G9E|1|R = 0.11069G9A|1|R:9G9J|1|R = 0.10669G9A|1|R:9G9B|1|R = 0.14309G9E|1|R:9G9A|1|R = 0.11069G9E|1|R:9G9E|1|R = 09G9E|1|R:9G9J|1|R = 0.06719G9E|1|R:9G9B|1|R = 0.11709G9J|1|R:9G9A|1|R = 0.10669G9J|1|R:9G9E|1|R = 0.06719G9J|1|R:9G9J|1|R = 09G9J|1|R:9G9B|1|R = 0.11199G9B|1|R:9G9A|1|R = 0.14309G9B|1|R:9G9E|1|R = 0.11709G9B|1|R:9G9J|1|R = 0.11199G9B|1|R:9G9B|1|R = 09G9A|1|R9G9E|1|R9G9J|1|R9G9B|1|RDiscrepancy0.000.020.040.060.080.100.120.14

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