Equivalence class NR_all_37185.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 36PE|1|A+ 36PE|1|B (rep) | SUSP1 viprRNA, Target DNA | Suspvirus SUSP1 | VIPR Ternary Complex with an ssDNA substrate, 12 subunits | Electron microscopy | 3 | 126 | 2026-09-16 | |||
| 2 | 35TX|1|A+ 35TX|1|B | SUSP1 viprRNA, Target ssRNA | Suspvirus SUSP1 | VIPR Ternary Complex with an ssRNA substrate, Closed Conformation, 11 subunits | Electron microscopy | 2.76 | 121 | 2026-09-16 | |||
| 3 | 36PC|1|A+ 36PC|1|B | SUSP1 viprRNA, Target DNA | Suspvirus SUSP1 | VIPR Ternary Complex with an ssDNA substrate, 11 subunits | Electron microscopy | 3 | 120 | 2026-09-16 | |||
| 4 | 35TR|1|A+ 35TR|1|B+ 35TR|1|C | Non-target strand, SUSP1 viprRNA, Target DNA strand | Suspvirus SUSP1 | VIPR Ternary Complex with a pre-unwound dsDNA substrate, 12 subunits | Electron microscopy | 3.13 | 186 | 2026-09-16 | |||
| 5 | 35SY|1|A+ 35SY|1|B+ 35SY|1|C | DNA (45-MER), RNA (88-MER), Target DNA strand | Suspvirus SUSP1 | VIPR Ternary Complex with a pre-unwound dsDNA substrate, 11 subunits | Electron microscopy | 3.17 | 178 | 2026-09-16 | |||
| 6 | 36PB|1|A+ 36PB|1|B | SUSP1 viprRNA, Target DNA | Suspvirus SUSP1 | VIPR Ternary Complex with an ssDNA substrate, 10 subunits | Electron microscopy | 3.1 | 118 | 2026-09-16 | |||
| 7 | 36PJ|1|A+ 36PJ|1|B | Non-target DNA, SUSP1 viprRNA, Target DNA | Suspvirus SUSP1 | VIPR Ternary Complex with a duplex dsDNA substrate, 7 subunits | Electron microscopy | 3.2 | 93 | 2026-09-16 | |||
| 8 | 35TW|1|A+ 35TW|1|B | SUSP1 viprRNA, Target ssRNA | Suspvirus SUSP1 | VIPR Ternary Complex with an ssRNA substrate, Closed Conformation | Electron microscopy | 2.94 | 89 | 2026-09-16 | |||
| 9 | 36PF|1|A+ 36PF|1|B | Non-target DNA, SUSP1 viprRNA, Target DNA | Suspvirus SUSP1 | VIPR Ternary Complex with a duplex dsDNA substrate, 5 subunits | Electron microscopy | 3.4 | 86 | 2026-09-16 | |||
| 10 | 36PP|1|A+ 36PP|1|B | Non-target DNA, SUSP1 viprRNA, Target DNA | Suspvirus SUSP1 | VIPR Ternary Complex with a duplex dsDNA substrate, 6 subunits | Electron microscopy | 3.3 | 86 | 2026-08-05 | |||
| 11 | 36PK|1|A+ 36PK|1|B | Non-target strand, SUSP1 viprRNA, Target DNA strand | Suspvirus SUSP1 | VIPR Ternary Complex with a duplex dsDNA substrate, 10 subunits | Electron microscopy | 3.3 | 117 | 2026-09-16 | |||
| 12 | 36PO|1|A+ 36PO|1|B | SUSP1 viprRNA, Target DNA | Suspvirus SUSP1 | VIPR Ternary Complex with a duplex dsDNA substrate, 8 subunits | Electron microscopy | 3.2 | 97 | 2026-09-16 | |||
| 13 | 36PG|1|A+ 36PG|1|B | SUSP1 viprRNA, Target Strand | Suspvirus SUSP1 | VIPR Ternary Complex with a duplex dsDNA substrate, 11 subunits | Electron microscopy | 3.5 | 121 | 2026-09-16 | |||
| 14 | 36PM|1|A+ 36PM|1|B | Non-target DNA, SUSP1 viprRNA, Target DNA | Suspvirus SUSP1 | VIPR Ternary Complex with a duplex dsDNA substrate, 9 subunits | Electron microscopy | 3.2 | 110 | 2026-09-16 |
Release history
| Release | 4.57 |
|---|---|
| Date | 2026-09-16 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 35TR|1|A+ 35TR|1|B+ 35TR|1|C | VIPR Ternary Complex with a pre-unwound dsDNA substrate, 12 subunits | ELECTRON MICROSCOPY | 3.13 | 186 | |
| 2 | 36PC|1|A+ 36PC|1|B | VIPR Ternary Complex with an ssDNA substrate, 11 subunits | ELECTRON MICROSCOPY | 3 | 120 | |
| 3 | 36PB|1|A+ 36PB|1|B | VIPR Ternary Complex with an ssDNA substrate, 10 subunits | ELECTRON MICROSCOPY | 3.1 | 118 | |
| 4 | 36PE|1|A+ 36PE|1|B | VIPR Ternary Complex with an ssDNA substrate, 12 subunits | ELECTRON MICROSCOPY | 3 | 126 | |
| 5 | 35SY|1|A+ 35SY|1|B+ 35SY|1|C | VIPR Ternary Complex with a pre-unwound dsDNA substrate, 11 subunits | ELECTRON MICROSCOPY | 3.17 | 178 | |
| 6 | 35TX|1|A+ 35TX|1|B | VIPR Ternary Complex with an ssRNA substrate, Closed Conformation, 11 subunits | ELECTRON MICROSCOPY | 2.76 | 121 | |
| 7 | 36PF|1|A+ 36PF|1|B | VIPR Ternary Complex with a duplex dsDNA substrate, 5 subunits | ELECTRON MICROSCOPY | 3.4 | 86 | |
| 8 | 36PJ|1|A+ 36PJ|1|B | VIPR Ternary Complex with a duplex dsDNA substrate, 7 subunits | ELECTRON MICROSCOPY | 3.2 | 93 | |
| 9 | 36PG|1|A+ 36PG|1|B | VIPR Ternary Complex with a duplex dsDNA substrate, 11 subunits | ELECTRON MICROSCOPY | 3.5 | 121 | |
| 10 | 36PP|1|A+ 36PP|1|B | VIPR Ternary Complex with a duplex dsDNA substrate, 6 subunits | ELECTRON MICROSCOPY | 3.3 | 86 | |
| 11 | 36PM|1|A+ 36PM|1|B | VIPR Ternary Complex with a duplex dsDNA substrate, 9 subunits | ELECTRON MICROSCOPY | 3.2 | 110 | |
| 12 | 36PK|1|A+ 36PK|1|B | VIPR Ternary Complex with a duplex dsDNA substrate, 10 subunits | ELECTRON MICROSCOPY | 3.3 | 117 | |
| 13 | 36PO|1|A+ 36PO|1|B | VIPR Ternary Complex with a duplex dsDNA substrate, 8 subunits | ELECTRON MICROSCOPY | 3.2 | 97 | |
| 14 | 35TW|1|A+ 35TW|1|B | VIPR Ternary Complex with an ssRNA substrate, Closed Conformation | ELECTRON MICROSCOPY | 2.94 | 89 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: