RNA 3D Hub //

Equivalence class NR_all_40050.1 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
18R60|1|E (rep)RNA (5'-R(P*GP*GP*CP*CP*UP*GP*CP*U)-3')Influenza A virus (A/Brevig Mission/1/1918(H1N1))1918 H1N1 Viral polymerase heterotrimer in complex with 4 repeat serine-5 phosphorylated PolII peptideElectron microscopy3.2382024-03-27
27NHX|1|ERNA (5'-R(P*GP*GP*CP*CP*UP*GP*CP*U)-3')Influenza A virus (A/Brevig Mission/1/1918(H1N1))1918 H1N1 Viral influenza polymerase heterotrimer - full transcriptase (Class1)Electron microscopy3.2382021-12-01
37NI0|1|ERNA (5'-R(P*GP*GP*CP*CP*UP*GP*CP*U)-3')Influenza A virus (A/Brevig Mission/1/1918(H1N1))1918 H1N1 Viral influenza polymerase heterotrimer - Replicase (class 3)Electron microscopy3.3282021-12-01
47NK1|1|ERNA (5'-R(P*GP*GP*CP*CP*UP*GP*CP*U)-3')Influenza A virus (A/Brevig Mission/1/1918(H1N1))1918 Influenza virus polymerase heterotirmer in complex with vRNA promoters and Nb8201Electron microscopy4.2282021-12-01
58R65|1|ERNA (5'-R(P*GP*GP*CP*CP*UP*GP*CP*U)-3')Influenza A virus (A/Brevig Mission/1/1918(H1N1))1918 H1N1 Viral polymerase heterotrimer in complex with 4 repeat serine-5 phosphorylated PolII peptide with ordered PB2 C-terminal domainsElectron microscopy4.2382024-03-27
67NJ3|1|ERNA (5'-R(P*GP*GP*CP*CP*UP*GP*CP*U)-3')Influenza A virus (A/Brevig Mission/1/1918(H1N1))1918 H1N1 Viral influenza polymerase heterotrimer with Nb8196 coreElectron microscopy4.4882021-12-01
77NJ5|1|ERNA (5'-R(P*GP*GP*CP*CP*UP*GP*CP*U)-3')Influenza A virus (A/Brevig Mission/1/1918(H1N1))1918 H1N1 Viral influenza polymerase heterotrimer with Nb8199 coreElectron microscopy4.6382021-12-01
87NKI|1|ERNA (5'-R(P*GP*GP*CP*CP*UP*GP*CP*U)-3')Influenza A virus (A/Brevig Mission/1/1918(H1N1))1918 H1N1 Viral influenza polymerase heterotrimer with Nb8209 coreElectron microscopy4.6782021-12-01
97NJ7|1|ERNA (5'-R(P*GP*GP*CP*CP*UP*GP*CP*U)-3')Influenza A virus (A/Brevig Mission/1/1918(H1N1))1918 H1N1 Viral influenza polymerase heterotrimer with Nb8200 coreElectron microscopy4.8282021-12-01
107NK2|1|ERNA (5'-R(P*GP*GP*CP*CP*UP*GP*CP*U)-3')Influenza A virus (A/Brevig Mission/1/1918(H1N1))1918 H1N1 Viral influenza polymerase heterotrimer with Nb8202 coreElectron microscopy4.8482021-12-01
117NIL|1|ERNA (5'-R(P*GP*GP*CP*CP*UP*GP*CP*U)-3')Influenza A virus (A/Brevig Mission/1/1918(H1N1))1918 H1N1 Viral influenza polymerase heterotrimer with Nb8190 coreElectron microscopy5.0182021-12-01
127NK4|1|ERNA (5'-R(P*GP*GP*CP*CP*UP*GP*CP*U)-3')Influenza A virus (A/Brevig Mission/1/1918(H1N1))1918 H1N1 Viral influenza polymerase heterotrimer with Nb8203 coreElectron microscopy5.3282021-12-01
137NJ4|1|ERNA (5'-R(P*GP*GP*CP*CP*UP*GP*CP*U)-3')Influenza A virus (A/Brevig Mission/1/1918(H1N1))1918 H1N1 Viral influenza polymerase heterotrimer with Nb8198 coreElectron microscopy5.8482021-12-01
147NIS|1|ERNA (5'-R(P*GP*GP*CP*CP*UP*GP*CP*U)-3')Influenza A virus (A/Brevig Mission/1/1918(H1N1))1918 H1N1 Viral influenza polymerase heterotrimer with Nb8192 coreElectron microscopy5.9682021-12-01
157NIK|1|ERNA (5'-R(P*GP*GP*CP*CP*UP*GP*CP*U)-3')Influenza A virus (A/Brevig Mission/1/1918(H1N1))1918 H1N1 Viral influenza polymerase heterotrimer with Nb8189 coreElectron microscopy6.282021-12-01
167NIR|1|ERNA (5'-R(P*GP*GP*CP*CP*UP*GP*CP*U)-3')Influenza A virus (A/Brevig Mission/1/1918(H1N1))1918 H1N1 Viral influenza polymerase heterotrimer with Nb8191 coreElectron microscopy6.782021-12-01

Release history

Release3.3783.3793.3803.381
Date2025-03-132025-03-192025-03-262025-04-02

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
17NK4|1|E1918 H1N1 Viral influenza polymerase heterotrimer with Nb8203 coreELECTRON MICROSCOPY5.328
27NKI|1|E1918 H1N1 Viral influenza polymerase heterotrimer with Nb8209 coreELECTRON MICROSCOPY4.678
37NIR|1|E1918 H1N1 Viral influenza polymerase heterotrimer with Nb8191 coreELECTRON MICROSCOPY6.78
47NK2|1|E1918 H1N1 Viral influenza polymerase heterotrimer with Nb8202 coreELECTRON MICROSCOPY4.848
57NJ5|1|E1918 H1N1 Viral influenza polymerase heterotrimer with Nb8199 coreELECTRON MICROSCOPY4.638
67NIL|1|E1918 H1N1 Viral influenza polymerase heterotrimer with Nb8190 coreELECTRON MICROSCOPY5.018
77NIK|1|E1918 H1N1 Viral influenza polymerase heterotrimer with Nb8189 coreELECTRON MICROSCOPY6.28
87NIS|1|E1918 H1N1 Viral influenza polymerase heterotrimer with Nb8192 coreELECTRON MICROSCOPY5.968
97NJ3|1|E1918 H1N1 Viral influenza polymerase heterotrimer with Nb8196 coreELECTRON MICROSCOPY4.488
107NJ4|1|E1918 H1N1 Viral influenza polymerase heterotrimer with Nb8198 coreELECTRON MICROSCOPY5.848
117NJ7|1|E1918 H1N1 Viral influenza polymerase heterotrimer with Nb8200 coreELECTRON MICROSCOPY4.828
127NK1|1|E1918 Influenza virus polymerase heterotirmer in complex with vRNA promoters and Nb8201ELECTRON MICROSCOPY4.228
137NHX|1|E1918 H1N1 Viral influenza polymerase heterotrimer - full transcriptase (Class1)ELECTRON MICROSCOPY3.238
147NI0|1|E1918 H1N1 Viral influenza polymerase heterotrimer - Replicase (class 3)ELECTRON MICROSCOPY3.328
158R60|1|E1918 H1N1 Viral polymerase heterotrimer in complex with 4 repeat serine-5 phosphorylated PolII peptideELECTRON MICROSCOPY3.238
168R65|1|E1918 H1N1 Viral polymerase heterotrimer in complex with 4 repeat serine-5 phosphorylated PolII peptide with ordered PB2 C-terminal domainsELECTRON MICROSCOPY4.238

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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