Equivalence class NR_all_44584.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 9HCH|1|B (rep) | Transfer RNA | tRNA-Phe (68-MER) | Mus musculus | Mitochondria | RF00005 | Mouse mitoribosome large subunit assembly intermediate bound to NSUN4, METRF4, GTPBP7 and the MALSU1-L0R8F8-mt-ACP complex, State C1 (SAMC knock-out) | Electron microscopy | 2.85 | 62 | 2025-06-18 |
| 2 | 9HCG|1|B | Transfer RNA | tRNA-Phe (68-MER) | Mus musculus | Mitochondria | RF00005 | Mouse mitoribosome large subunit assembly intermediate bound to NSUN4, METRF4, MRM2, GTPBP7 and MALSU1-L0R8F8-mt-ACP complex, State D (SAMC knock-out) | Electron microscopy | 2.91 | 63 | 2025-06-18 |
| 3 | 9HCD|1|B | Transfer RNA | tRNA-Phe (68-MER) | Mus musculus | Mitochondria | RF00005 | Mouse mitoribosome large subunit assembly intermediate (with uL16m) bound to MRM3-dimer, DDX28 and the MALSU-L0R8F8-mt-ACP complex, state A2 (SAMC knock-out) | Electron microscopy | 4.63 | 61 | 2025-06-11 |
| 4 | 9HCC|1|B | Transfer RNA | tRNA-Phe (68-MER) | Mus musculus | Mitochondria | RF00005 | Mouse mitoribosome large subunit assembly intermediate (without uL16m) bound to MRM3-dimer, DDX28 and the MALSU-L0R8F8-mt-ACP complex, State A1 (SAMC knock-out) | Electron microscopy | 5.67 | 61 | 2025-06-18 |
| 5 | 9HCE|1|B | Transfer RNA | tRNA-Phe (68-MER) | Mus musculus | Mitochondria | RF00005 | Mouse mitoribosome large subunit assembly intermediate (without uL16m) bound to MRM3 dimer and the MALSU-L0R8F8-mt-ACP complex, State A3 (SAMC knock out) | Electron microscopy | 7.31 | 61 | 2025-06-18 |
Release history
| Release | 3.392 |
|---|---|
| Date | 2025-06-18 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 9HCD|1|B | Mouse mitoribosome large subunit assembly intermediate (with uL16m) bound to MRM3-dimer, DDX28 and the MALSU-L0R8F8-mt-ACP complex, state A2 (SAMC knock-out) | ELECTRON MICROSCOPY | 4.63 | 61 | |
| 2 | 9HCC|1|B | Mouse mitoribosome large subunit assembly intermediate (without uL16m) bound to MRM3-dimer, DDX28 and the MALSU-L0R8F8-mt-ACP complex, State A1 (SAMC knock-out) | ELECTRON MICROSCOPY | 5.67 | 61 | |
| 3 | 9HCE|1|B | Mouse mitoribosome large subunit assembly intermediate (without uL16m) bound to MRM3 dimer and the MALSU-L0R8F8-mt-ACP complex, State A3 (SAMC knock out) | ELECTRON MICROSCOPY | 7.31 | 61 | |
| 4 | 9HCG|1|B | Mouse mitoribosome large subunit assembly intermediate bound to NSUN4, METRF4, MRM2, GTPBP7 and MALSU1-L0R8F8-mt-ACP complex, State D (SAMC knock-out) | ELECTRON MICROSCOPY | 2.91 | 63 | |
| 5 | 9HCH|1|B | Mouse mitoribosome large subunit assembly intermediate bound to NSUN4, METRF4, GTPBP7 and the MALSU1-L0R8F8-mt-ACP complex, State C1 (SAMC knock-out) | ELECTRON MICROSCOPY | 2.85 | 62 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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