Equivalence class NR_all_46995.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5VYC|1|i2 (rep) | Small subunit ribosomal RNA | Human 18S ribosomal RNA | Homo sapiens | Eukarya | RF01960 | Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1. | X-ray diffraction | 6 | 2017-07-19 |
| 2 | 5VYC|1|i3 | Small subunit ribosomal RNA | Human 18S ribosomal RNA | Homo sapiens | Eukarya | RF01960 | Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1. | X-ray diffraction | 6 | 2017-07-19 |
| 3 | 5VYC|1|i5 | Small subunit ribosomal RNA | Human 18S ribosomal RNA | Homo sapiens | Eukarya | RF01960 | Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1. | X-ray diffraction | 6 | 2017-07-19 |
| 4 | 5VYC|1|i1 | Small subunit ribosomal RNA | Human 18S ribosomal RNA | Homo sapiens | Eukarya | RF01960 | Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1. | X-ray diffraction | 6 | 2017-07-19 |
| 5 | 5VYC|1|i6 | Small subunit ribosomal RNA | Human 18S ribosomal RNA | Homo sapiens | Eukarya | RF01960 | Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1. | X-ray diffraction | 6 | 2017-07-19 |
| 6 | 5VYC|1|i4 | Small subunit ribosomal RNA | Human 18S ribosomal RNA | Homo sapiens | Eukarya | RF01960 | Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1. | X-ray diffraction | 6 | 2017-07-19 |
| 7 | 4UG0|1|S2 | Small subunit ribosomal RNA | 18S ribosomal RNA | Homo sapiens | Eukarya | RF01960 | STRUCTURE OF THE HUMAN 80S RIBOSOME | Electron microscopy | 3.6 | 2015-06-10 |
| 8 | 5AJ0|1|B1 | Small subunit ribosomal RNA | 18S ribosomal RNA | Homo sapiens | Eukarya | RF01960 | Cryo electron microscopy of actively translating human polysomes (POST state). | Electron microscopy | 3.5 | 2015-05-20 |
| 9 | 5A2Q|1|2 | Small subunit ribosomal RNA | 18S RRNA | Homo sapiens | Eukarya | RF01960 | Structure of the HCV IRES bound to the human ribosome | Electron microscopy | 3.9 | 2015-07-15 |
| 10 | 5OA3|1|2 | Small subunit ribosomal RNA | 18S ribosomal RNA | Homo sapiens | Eukarya | RF01960 | Human 40S-eIF2D-re-initiation complex | Electron microscopy | 4.2 | 2017-08-09 |
| 11 | 5LKS|1|S2 | Small subunit ribosomal RNA | 18S ribosomal RNA | Homo sapiens | Eukarya | RF01960 | Structure-function insights reveal the human ribosome as a cancer target for antibiotics | Electron microscopy | 3.6 | 2017-04-26 |
| 12 | 4V6X|1|B2 | Small subunit ribosomal RNA | 18S ribosomal RNA | Homo sapiens | Eukarya | RF01960 | Structure of the human 80S ribosome | Electron microscopy | 5 | 2014-07-09 |
| 13 | 5T2C|1|AA | Small subunit ribosomal RNA | 18S rRNA | Homo sapiens | Eukarya | RF01960 | CryoEM structure of the human ribosome at 3.6 Angstrom resolution | Electron microscopy | 3.6 | 2017-01-25 |
| 14 | 5A8L|1|B | Small subunit ribosomal RNA | HUMAN 18S RIBOSOMAL RNA | Homo sapiens | Eukarya | RF01960 | Human eRF1 and the hCMV nascent peptide in the translation termination complex | Electron microscopy | 3.8 | 2015-12-02 |
Release history
| Release | 2.141 | 2.142 | 2.143 | 2.144 | 2.145 | 2.146 | 2.147 | 2.148 | 2.149 | 2.150 | 2.151 | 2.152 | 2.153 | 2.154 | 2.155 | 2.156 | 2.157 | 2.158 | 3.0 | 3.1 | 3.2 | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2017-08-12 | 2017-08-19 | 2017-08-26 | 2017-09-03 | 2017-09-09 | 2017-09-16 | 2017-09-23 | 2017-09-30 | 2017-10-07 | 2017-10-14 | 2017-10-21 | 2017-10-28 | 2017-11-03 | 2017-11-10 | 2017-11-17 | 2017-11-24 | 2017-12-01 | 2017-12-08 | 2017-12-15 | 2017-12-22 | 2017-12-29 | 2018-01-05 | 2018-01-12 | 2018-01-19 | 2018-01-26 | 2018-02-02 | 2018-02-09 |
Parents
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 4V6X|1|B2 | Structure of the human 80S ribosome | ELECTRON MICROSCOPY | 5 | 1861 | |
| 2 | 5A2Q|1|2 | Structure of the HCV IRES bound to the human ribosome | ELECTRON MICROSCOPY | 3.9 | 1665 | |
| 3 | 5OA3|1|2 | Human 40S-eIF2D-re-initiation complex | ELECTRON MICROSCOPY | 4.2 | 1661 | |
| 4 | 5VYC|1|i6 | Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1. | X-RAY DIFFRACTION | 6 | 1742 | |
| 5 | 5VYC|1|i2 | Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1. | X-RAY DIFFRACTION | 6 | 1742 | |
| 6 | 5VYC|1|i1 | Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1. | X-RAY DIFFRACTION | 6 | 1742 | |
| 7 | 5VYC|1|i5 | Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1. | X-RAY DIFFRACTION | 6 | 1742 | |
| 8 | 5VYC|1|i3 | Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1. | X-RAY DIFFRACTION | 6 | 1742 | |
| 9 | 5VYC|1|i4 | Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1. | X-RAY DIFFRACTION | 6 | 1742 | |
| 10 | 5T2C|1|AA | CryoEM structure of the human ribosome at 3.6 Angstrom resolution | ELECTRON MICROSCOPY | 3.6 | 1742 | |
| 11 | 4UG0|1|S2 | STRUCTURE OF THE HUMAN 80S RIBOSOME | ELECTRON MICROSCOPY | 3.6 | 1742 | |
| 12 | 5LKS|1|S2 | Structure-function insights reveal the human ribosome as a cancer target for antibiotics | ELECTRON MICROSCOPY | 3.6 | 1742 | |
| 13 | 5AJ0|1|B1 | Cryo electron microscopy of actively translating human polysomes (POST state). | ELECTRON MICROSCOPY | 3.5 | 1708 | |
| 14 | 5A8L|1|B | Human eRF1 and the hCMV nascent peptide in the translation termination complex | ELECTRON MICROSCOPY | 3.8 | 67 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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