Equivalence class NR_all_48165.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8D28|1|B (rep) | RNA (33-MER) | synthetic construct | Crystal structure of theophylline aptamer in complex with theophylline | X-ray diffraction | 1.42 | 33 | 2022-11-30 | |||
| 2 | 8D28|1|A | RNA (33-MER) | synthetic construct | Crystal structure of theophylline aptamer in complex with theophylline | X-ray diffraction | 1.42 | 33 | 2022-11-30 | |||
| 3 | 8D5L|1|D | RNA (33-MER) | synthetic construct | Crystal structure of theophylline aptamer in complex with TAL1 | X-ray diffraction | 1.64 | 33 | 2022-11-30 | |||
| 4 | 8D5L|1|C | RNA (33-MER) | synthetic construct | Crystal structure of theophylline aptamer in complex with TAL1 | X-ray diffraction | 1.64 | 33 | 2022-11-30 | |||
| 5 | 8D5L|1|B | RNA (33-MER) | synthetic construct | Crystal structure of theophylline aptamer in complex with TAL1 | X-ray diffraction | 1.64 | 33 | 2022-11-30 | |||
| 6 | 8D5L|1|A | RNA (33-MER) | synthetic construct | Crystal structure of theophylline aptamer in complex with TAL1 | X-ray diffraction | 1.64 | 33 | 2022-11-30 | |||
| 7 | 8D2B|1|A | RNA (33-MER) | synthetic construct | Crystal structure of theophylline aptamer in complex with TAL2 | X-ray diffraction | 1.44 | 33 | 2022-11-30 | |||
| 8 | 8D2B|1|B | RNA (33-MER) | synthetic construct | Crystal structure of theophylline aptamer in complex with TAL2 | X-ray diffraction | 1.44 | 33 | 2022-11-30 | |||
| 9 | 8D2A|1|B | RNA (33-MER) | synthetic construct | Crystal structure of theophylline aptamer in complex with TAL3 | X-ray diffraction | 2.17 | 33 | 2022-11-30 | |||
| 10 | 8D2A|1|A | RNA (33-MER) | synthetic construct | Crystal structure of theophylline aptamer in complex with TAL3 | X-ray diffraction | 2.17 | 33 | 2022-11-30 | |||
| 11 | 8D5O|1|A | RNA (33-MER) | synthetic construct | Crystal structure of theophylline aptamer in complex with TAL4 | X-ray diffraction | 2.7 | 33 | 2022-11-30 | |||
| 12 | 8D5O|1|B | RNA (33-MER) | synthetic construct | Crystal structure of theophylline aptamer in complex with TAL4 | X-ray diffraction | 2.7 | 33 | 2022-11-30 | |||
| 13 | 1EHT|3|A | THEOPHYLLINE-BINDING RNA | THEOPHYLLINE-BINDING RNA IN COMPLEX WITH THEOPHYLLINE, NMR, 10 STRUCTURES | Solution NMR | 33 | 1997-12-24 | |||||
| 14 | 1EHT|8|A | THEOPHYLLINE-BINDING RNA | THEOPHYLLINE-BINDING RNA IN COMPLEX WITH THEOPHYLLINE, NMR, 10 STRUCTURES | Solution NMR | 33 | 1997-12-24 | |||||
| 15 | 1O15|1|A | THEOPHYLLINE-BINDING RNA | THEOPHYLLINE-BINDING RNA IN COMPLEX WITH THEOPHYLLINE, NMR, REGULARIZED MEAN STRUCTURE, REFINEMENT WITH TORSION ANGLE AND BASE-BASE POSITIONAL DATABASE POTENTIALS AND DIPOLAR COUPLINGS | Solution NMR | 33 | 2003-02-18 |
Release history
| Release | 3.339 | 3.340 | 3.341 | 3.342 | 3.343 | 3.344 | 3.345 | 3.346 | 3.347 | 3.348 | 3.349 | 3.350 | 3.351 | 3.352 | 3.353 | 3.354 | 3.355 | 3.356 | 3.357 | 3.358 | 3.359 | 3.360 | 3.361 | 3.362 | 3.363 | 3.364 | 3.365 | 3.366 | 3.367 | 3.368 | 3.369 | 3.370 | 3.371 | 3.372 | 3.373 | 3.374 | 3.375 | 3.376 | 3.377 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-06-12 | 2024-06-19 | 2024-06-26 | 2024-07-03 | 2024-07-10 | 2024-07-17 | 2024-07-25 | 2024-07-31 | 2024-08-07 | 2024-08-14 | 2024-08-21 | 2024-08-28 | 2024-09-04 | 2024-09-11 | 2024-09-18 | 2024-09-25 | 2024-10-02 | 2024-10-09 | 2024-10-16 | 2024-10-23 | 2024-10-30 | 2024-11-06 | 2024-11-13 | 2024-11-20 | 2024-11-27 | 2024-12-04 | 2024-12-11 | 2024-12-18 | 2024-12-25 | 2025-01-01 | 2025-01-08 | 2025-01-15 | 2025-01-22 | 2025-01-29 | 2025-02-05 | 2025-02-12 | 2025-02-19 | 2025-02-26 | 2025-03-05 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 1EHT|3|A | THEOPHYLLINE-BINDING RNA IN COMPLEX WITH THEOPHYLLINE, NMR, 10 STRUCTURES | SOLUTION NMR | 33 | ||
| 2 | 1O15|1|A | THEOPHYLLINE-BINDING RNA IN COMPLEX WITH THEOPHYLLINE, NMR, REGULARIZED MEAN STRUCTURE, REFINEMENT WITH TORSION ANGLE AND BASE-BASE POSITIONAL DATABASE POTENTIALS AND DIPOLAR COUPLINGS | SOLUTION NMR | 33 | ||
| 3 | 8D28|1|B | Crystal structure of theophylline aptamer in complex with theophylline | X-RAY DIFFRACTION | 1.42 | 33 | |
| 4 | 8D2B|1|B | Crystal structure of theophylline aptamer in complex with TAL2 | X-RAY DIFFRACTION | 1.44 | 33 | |
| 5 | 8D2A|1|A | Crystal structure of theophylline aptamer in complex with TAL3 | X-RAY DIFFRACTION | 2.17 | 33 | |
| 6 | 8D5O|1|B | Crystal structure of theophylline aptamer in complex with TAL4 | X-RAY DIFFRACTION | 2.7 | 33 | |
| 7 | 8D2B|1|A | Crystal structure of theophylline aptamer in complex with TAL2 | X-RAY DIFFRACTION | 1.44 | 33 | |
| 8 | 8D5O|1|A | Crystal structure of theophylline aptamer in complex with TAL4 | X-RAY DIFFRACTION | 2.7 | 33 | |
| 9 | 8D2A|1|B | Crystal structure of theophylline aptamer in complex with TAL3 | X-RAY DIFFRACTION | 2.17 | 33 | |
| 10 | 8D28|1|A | Crystal structure of theophylline aptamer in complex with theophylline | X-RAY DIFFRACTION | 1.42 | 33 | |
| 11 | 8D5L|1|A | Crystal structure of theophylline aptamer in complex with TAL1 | X-RAY DIFFRACTION | 1.64 | 33 | |
| 12 | 8D5L|1|C | Crystal structure of theophylline aptamer in complex with TAL1 | X-RAY DIFFRACTION | 1.64 | 33 | |
| 13 | 8D5L|1|B | Crystal structure of theophylline aptamer in complex with TAL1 | X-RAY DIFFRACTION | 1.64 | 33 | |
| 14 | 8D5L|1|D | Crystal structure of theophylline aptamer in complex with TAL1 | X-RAY DIFFRACTION | 1.64 | 33 | |
| 15 | 1EHT|8|A | THEOPHYLLINE-BINDING RNA IN COMPLEX WITH THEOPHYLLINE, NMR, 10 STRUCTURES | SOLUTION NMR | 33 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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