Equivalence class NR_all_50897.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8ONY|1|8 (rep) | 5.8S ribosomal RNA | 5.8S rRNA | Homo sapiens | Eukarya | RF00002 | Human Methionine Aminopeptidase 2 at the 80S ribosome | Electron microscopy | 2.92 | 58 | 2024-02-21 |
| 2 | 6SXO|1|L8 | 5.8S ribosomal RNA | 5.8S ribosomal RNA | Homo sapiens | Eukarya | RF00002 | Cryo-EM structure of the human Ebp1-ribosome complex | Electron microscopy | 3.3 | 58 | 2020-02-19 |
| 3 | 9GJ6|1|8 | 5.8S ribosomal RNA | 5.8S rRNA | Homo sapiens | Eukarya | RF00002 | Human 80S ribosome in complex with NatA in proximal and distal position | Electron microscopy | 3.91 | 58 | 2026-02-18 |
| 4 | 9GJ5|1|8 | 5.8S ribosomal RNA | 5.8S rRNA | Homo sapiens | Eukarya | RF00002 | Human 80S ribosome in complex with NatA in distal position and Ebp1 | Electron microscopy | 4.61 | 58 | 2026-02-18 |
Release history
| Release | 4.27 |
|---|---|
| Date | 2026-02-18 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 6SXO|1|L8 | Cryo-EM structure of the human Ebp1-ribosome complex | ELECTRON MICROSCOPY | 3.3 | 58 | |
| 2 | 8ONY|1|8 | Human Methionine Aminopeptidase 2 at the 80S ribosome | ELECTRON MICROSCOPY | 2.92 | 58 | |
| 3 | 9GJ5|1|8 | Human 80S ribosome in complex with NatA in distal position and Ebp1 | ELECTRON MICROSCOPY | 4.61 | 58 | |
| 4 | 9GJ6|1|8 | Human 80S ribosome in complex with NatA in proximal and distal position | ELECTRON MICROSCOPY | 3.91 | 58 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: