Equivalence class NR_all_51660.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5GAD|1|1 (rep) | Small signal recognition particle RNA | ESRP 4.5S RNA | Escherichia coli | Bacteria | RF00169 | RNC-SRP-SR complex early state | Electron microscopy | 3.7 | 2016-01-27 |
| 2 | 5GAH|1|1 | Small signal recognition particle RNA | SRP 4.5S RNA | Escherichia coli | Bacteria | RF00169 | RNC in complex with SRP with detached NG domain | Electron microscopy | 3.8 | 2016-01-27 |
| 3 | 5GAG|1|1 | Small signal recognition particle RNA | SRP 4.5S RNA | Escherichia coli | Bacteria | RF00169 | RNC in complex with SRP-SR in the closed state | Electron microscopy | 3.8 | 2016-01-27 |
| 4 | 2IY3|1|B | Small signal recognition particle RNA | 4.5S RNA | Escherichia coli | Bacteria | RF00169 | Structure of the E. Coli Signal Regognition Particle | Electron microscopy | 16 | 2006-11-02 |
Release history
| Release | 2.60 |
|---|---|
| Date | 2016-01-29 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_51660.1 | NR_20.0_51660.2 | 2.61 | (4) 2IY3|1|B, 5GAD|1|1, 5GAG|1|1, 5GAH|1|1 | (0) | (1) 5GAF|1|1 |
| NR_all_51660.1 | NR_4.0_51660.2 | 2.61 | (3) 5GAD|1|1, 5GAG|1|1, 5GAH|1|1 | (1) 2IY3|1|B | (0) |
| NR_all_51660.1 | NR_all_51660.2 | 2.61 | (4) 2IY3|1|B, 5GAD|1|1, 5GAG|1|1, 5GAH|1|1 | (0) | (1) 5GAF|1|1 |
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 5GAD|1|1 | RNC-SRP-SR complex early state | ELECTRON MICROSCOPY | 3.7 | 43 | |
| 2 | 5GAH|1|1 | RNC in complex with SRP with detached NG domain | ELECTRON MICROSCOPY | 3.8 | 43 | |
| 3 | 5GAG|1|1 | RNC in complex with SRP-SR in the closed state | ELECTRON MICROSCOPY | 3.8 | 43 | |
| 4 | 2IY3|1|B | Structure of the E. Coli Signal Regognition Particle | ELECTRON MICROSCOPY | 16 | 110 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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