Equivalence class NR_all_51758.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7RE1|1|T+ 7RE1|1|P (rep) | Product RNA, Template RNA | synthetic construct | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC (composite) | Electron microscopy | 2.91 | 2021-12-01 | |||
| 2 | 7RDY|1|T+ 7RDY|1|P | Product RNA, Template RNA | synthetic construct | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - engaged class | Electron microscopy | 3.1 | 2021-12-01 | |||
| 3 | 7RE3|1|T+ 7RE3|1|P | Product RNA, Template RNA | synthetic construct | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC dimer | Electron microscopy | 3.33 | 2021-11-24 | |||
| 4 | 7RE3|1|U+ 7RE3|1|Q | Product RNA, Template RNA | synthetic construct | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC dimer | Electron microscopy | 3.33 | 2021-11-24 | |||
| 5 | 7RE2|1|T+ 7RE2|1|P | Product RNA, Template RNA | synthetic construct | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(1)-RTC | Electron microscopy | 3.17 | 2021-12-01 | |||
| 6 | 7KRN|1|T+ 7KRN|1|P | RNA (37-MER), RNA (43-MER) | Severe acute respiratory syndrome coronavirus 2 | Structure of SARS-CoV-2 backtracked complex bound to nsp13 helicase - nsp13(1)-BTC | Electron microscopy | 3.4 | 2021-04-21 | |||
| 7 | 7RE0|1|T+ 7RE0|1|P | Product RNA, Template RNA | synthetic construct | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - swiveled class | Electron microscopy | 3.5 | 2021-12-01 | |||
| 8 | 7RDX|1|T+ 7RDX|1|P | Product RNA, Template RNA | synthetic construct | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - open class | Electron microscopy | 3.1 | 2021-11-24 | |||
| 9 | 7KRO|1|T+ 7KRO|1|P | RNA (37-MER), RNA (43-MER) | Severe acute respiratory syndrome coronavirus 2 | Structure of SARS-CoV-2 backtracked complex complex bound to nsp13 helicase - nsp13(2)-BTC | Electron microscopy | 3.6 | 2021-04-21 | |||
| 10 | 7RDZ|1|T+ 7RDZ|1|P | Product RNA, Template RNA | synthetic construct | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - apo class | Electron microscopy | 3.6 | 2021-11-24 | |||
| 11 | 6XEZ|1|T+ 6XEZ|1|P | Product RNA, Template RNA | Severe acute respiratory syndrome-related coronavirus | Structure of SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC | Electron microscopy | 3.5 | 2020-07-29 |
Release history
| Release | 3.207 | 3.208 | 3.209 | 3.210 | 3.211 | 3.212 | 3.213 | 3.214 | 3.215 | 3.216 | 3.217 | 3.218 | 3.219 | 3.220 | 3.221 | 3.222 | 3.223 | 3.224 | 3.225 | 3.226 | 3.227 | 3.228 | 3.229 | 3.230 | 3.231 | 3.232 | 3.233 | 3.234 | 3.235 | 3.236 | 3.237 | 3.238 | 3.239 | 3.240 | 3.241 | 3.242 | 3.243 | 3.244 | 3.245 | 3.246 | 3.247 | 3.248 | 3.249 | 3.250 | 3.251 | 3.252 | 3.253 | 3.254 | 3.255 | 3.256 | 3.257 | 3.258 | 3.259 | 3.260 | 3.261 | 3.262 | 3.263 | 3.264 | 3.265 | 3.266 | 3.267 | 3.268 | 3.269 | 3.270 | 3.271 | 3.272 | 3.273 | 3.274 | 3.275 | 3.276 | 3.277 | 3.278 | 3.279 | 3.280 | 3.281 | 3.282 | 3.283 | 3.284 | 3.285 | 3.286 | 3.287 | 3.288 | 3.289 | 3.290 | 3.291 | 3.292 | 3.293 | 3.294 | 3.295 | 3.296 | 3.297 | 3.298 | 3.299 | 3.300 | 3.301 | 3.302 | 3.303 | 3.304 | 3.305 | 3.306 | 3.307 | 3.308 | 3.309 | 3.310 | 3.311 | 3.312 | 3.313 | 3.314 | 3.315 | 3.316 | 3.317 | 3.318 | 3.319 | 3.320 | 3.321 | 3.322 | 3.323 | 3.324 | 3.325 | 3.326 | 3.327 | 3.328 | 3.329 | 3.330 | 3.331 | 3.332 |
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| Date | 2021-12-01 | 2021-12-08 | 2021-12-15 | 2021-12-22 | 2021-12-29 | 2022-01-05 | 2022-01-12 | 2022-01-19 | 2022-01-26 | 2022-02-02 | 2022-02-09 | 2022-02-16 | 2022-02-23 | 2022-03-02 | 2022-03-09 | 2022-03-16 | 2022-03-23 | 2022-03-30 | 2022-04-06 | 2022-04-13 | 2022-04-20 | 2022-04-27 | 2022-05-04 | 2022-05-11 | 2022-05-18 | 2022-05-25 | 2022-06-01 | 2022-06-08 | 2022-06-15 | 2022-06-22 | 2022-06-29 | 2022-07-06 | 2022-07-13 | 2022-07-20 | 2022-07-27 | 2022-08-03 | 2022-08-10 | 2022-08-17 | 2022-08-24 | 2022-08-31 | 2022-09-07 | 2022-09-14 | 2022-09-21 | 2022-09-28 | 2022-10-05 | 2022-10-12 | 2022-10-19 | 2022-10-26 | 2022-11-02 | 2022-11-09 | 2022-11-16 | 2022-11-23 | 2022-11-30 | 2022-12-07 | 2022-12-14 | 2022-12-21 | 2022-12-28 | 2023-01-04 | 2023-01-11 | 2023-01-18 | 2023-01-25 | 2023-02-01 | 2023-02-08 | 2023-02-15 | 2023-02-22 | 2023-03-01 | 2023-03-08 | 2023-03-15 | 2023-03-22 | 2023-03-29 | 2023-04-05 | 2023-04-12 | 2023-04-19 | 2023-04-26 | 2023-05-03 | 2023-05-10 | 2023-05-17 | 2023-05-24 | 2023-05-31 | 2023-06-07 | 2023-06-14 | 2023-06-21 | 2023-06-28 | 2023-07-05 | 2023-07-12 | 2023-07-19 | 2023-07-26 | 2023-08-02 | 2023-08-09 | 2023-08-16 | 2023-08-23 | 2023-08-30 | 2023-09-06 | 2023-09-13 | 2023-09-20 | 2023-09-27 | 2023-10-04 | 2023-10-11 | 2023-10-18 | 2023-10-25 | 2023-11-01 | 2023-11-08 | 2023-11-15 | 2023-11-24 | 2023-11-29 | 2023-12-06 | 2023-12-13 | 2023-12-20 | 2023-12-27 | 2024-01-03 | 2024-01-10 | 2024-01-17 | 2024-01-24 | 2024-01-31 | 2024-02-07 | 2024-02-14 | 2024-02-21 | 2024-02-28 | 2024-03-06 | 2024-03-13 | 2024-03-20 | 2024-03-27 | 2024-04-03 | 2024-04-10 | 2024-04-17 | 2024-04-24 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_51758.1 | NR_all_60347.1 | 3.207 | (7) 6XEZ|1|T+6XEZ|1|P, 7KRN|1|T+7KRN|1|P, 7KRO|1|T+7KRO|1|P, 7RDX|1|T+7RDX|1|P, 7RDZ|1|T+7RDZ|1|P, 7RE3|1|T+7RE3|1|P, 7RE3|1|U+7RE3|1|Q | (4) 7RDY|1|T+7RDY|1|P, 7RE0|1|T+7RE0|1|P, 7RE1|1|T+7RE1|1|P, 7RE2|1|T+7RE2|1|P | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 7RDX|1|T+ 7RDX|1|P | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - open class | ELECTRON MICROSCOPY | 3.1 | 46 | |
| 2 | 7RE3|1|U+ 7RE3|1|Q | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC dimer | ELECTRON MICROSCOPY | 3.33 | 37 | |
| 3 | 7RE3|1|T+ 7RE3|1|P | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC dimer | ELECTRON MICROSCOPY | 3.33 | 37 | |
| 4 | 7RE2|1|T+ 7RE2|1|P | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(1)-RTC | ELECTRON MICROSCOPY | 3.17 | 37 | |
| 5 | 7RE0|1|T+ 7RE0|1|P | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - swiveled class | ELECTRON MICROSCOPY | 3.5 | 37 | |
| 6 | 7RE1|1|T+ 7RE1|1|P | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC (composite) | ELECTRON MICROSCOPY | 2.91 | 37 | |
| 7 | 7RDZ|1|T+ 7RDZ|1|P | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - apo class | ELECTRON MICROSCOPY | 3.6 | 37 | |
| 8 | 7RDY|1|T+ 7RDY|1|P | SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - engaged class | ELECTRON MICROSCOPY | 3.1 | 44 | |
| 9 | 6XEZ|1|T+ 6XEZ|1|P | Structure of SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC | ELECTRON MICROSCOPY | 3.5 | 36 | |
| 10 | 7KRO|1|T+ 7KRO|1|P | Structure of SARS-CoV-2 backtracked complex complex bound to nsp13 helicase - nsp13(2)-BTC | ELECTRON MICROSCOPY | 3.6 | 43 | |
| 11 | 7KRN|1|T+ 7KRN|1|P | Structure of SARS-CoV-2 backtracked complex bound to nsp13 helicase - nsp13(1)-BTC | ELECTRON MICROSCOPY | 3.4 | 43 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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