#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17ZW0|1|sl (rep)Transfer RNAmRNA, tRNASaccharomyces cerevisiae W303EukaryaRF00005FAP-80S Complex - Rotated stateElectron microscopy2.42022-10-05
28AGX|1|xTransfer RNAAla tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state with the RING domain of Ltn1 in the IN positionElectron microscopy2.42023-03-08
38AGX|1|yTransfer RNAAla tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state with the RING domain of Ltn1 in the IN positionElectron microscopy2.42023-03-08
48AAF|1|xTransfer RNAAla tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state GElectron microscopy2.52023-03-08
58AAF|1|yTransfer RNAAla tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state GElectron microscopy2.52023-03-08
68AGT|1|xTransfer RNAA-site Ala aminoacyl-tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state FElectron microscopy2.62023-03-08
78AGV|1|xTransfer RNAAla tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state HElectron microscopy2.62023-03-08
88AGW|1|xTransfer RNAAla tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state DElectron microscopy2.62023-03-08
98AGZ|1|xTransfer RNAAla tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state with the RING domain of Ltn1 in the OUT positionElectron microscopy2.62023-03-08
108AGT|1|yTransfer RNAP-site petidyl-tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state FElectron microscopy2.62023-03-08
118AGV|1|yTransfer RNAAla tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state HElectron microscopy2.62023-03-08
128AGW|1|yTransfer RNAAla tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state DElectron microscopy2.62023-03-08
138AGZ|1|yTransfer RNAAla tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state with the RING domain of Ltn1 in the OUT positionElectron microscopy2.62023-03-08
148AGU|1|yTransfer RNAP-site tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast RQC complex in state EElectron microscopy2.72023-03-08
159BDN|1|TIRNTransfer RNAtRNAAlaSaccharomyces cerevisiaeEukaryaRF0000580S ribosome with angiogenin and tRNAAlaElectron microscopy3.12024-07-24
169BDP|1|TIRNTransfer RNAtRNAAlaSaccharomyces cerevisiaeEukaryaRF0000580S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAlaElectron microscopy3.72024-07-24
176R84|1|BTransfer RNAtRNA-AlaSaccharomyces cerevisiaeEukaryaRF00005Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)Electron microscopy3.62019-06-26
186R87|1|BTransfer RNAtRNA-AlaSaccharomyces cerevisiaeEukaryaRF00005Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)Electron microscopy3.42019-06-26

Release history

Release3.3453.3463.3473.3483.3493.3503.3513.3523.3533.3543.3553.3563.3573.3583.3593.3603.3613.3623.3633.364
Date2024-07-252024-07-312024-08-072024-08-142024-08-212024-08-282024-09-042024-09-112024-09-182024-09-252024-10-022024-10-092024-10-162024-10-232024-10-302024-11-062024-11-132024-11-202024-11-272024-12-04

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
19BDP|1|TIRN80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAlaELECTRON MICROSCOPY3.776
29BDN|1|TIRN80S ribosome with angiogenin and tRNAAlaELECTRON MICROSCOPY3.176
38AGW|1|xYeast RQC complex in state DELECTRON MICROSCOPY2.674
48AAF|1|xYeast RQC complex in state GELECTRON MICROSCOPY2.573
58AGT|1|xYeast RQC complex in state FELECTRON MICROSCOPY2.674
68AGX|1|xYeast RQC complex in state with the RING domain of Ltn1 in the IN positionELECTRON MICROSCOPY2.473
78AGZ|1|xYeast RQC complex in state with the RING domain of Ltn1 in the OUT positionELECTRON MICROSCOPY2.673
88AGV|1|xYeast RQC complex in state HELECTRON MICROSCOPY2.674
98AGT|1|yYeast RQC complex in state FELECTRON MICROSCOPY2.673
108AGW|1|yYeast RQC complex in state DELECTRON MICROSCOPY2.673
118AGU|1|yYeast RQC complex in state EELECTRON MICROSCOPY2.773
128AGV|1|yYeast RQC complex in state HELECTRON MICROSCOPY2.673
138AGX|1|yYeast RQC complex in state with the RING domain of Ltn1 in the IN positionELECTRON MICROSCOPY2.472
148AGZ|1|yYeast RQC complex in state with the RING domain of Ltn1 in the OUT positionELECTRON MICROSCOPY2.672
158AAF|1|yYeast RQC complex in state GELECTRON MICROSCOPY2.572
167ZW0|1|slFAP-80S Complex - Rotated stateELECTRON MICROSCOPY2.476
176R87|1|BYeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)ELECTRON MICROSCOPY3.476
186R84|1|BYeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)ELECTRON MICROSCOPY3.676

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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