#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15MPS|1|6 (rep)U6 spliceosomal RNASaccharomyces cerevisiae strain T.52_2H chromosome XII sequence, U2 snRNA, Yeast UBC4 gene for ubiquitin-conjugating enzymeSaccharomyces cerevisiaeEukaryaRF00026Structure of a spliceosome remodeled for exon ligationElectron microscopy3.852017-01-18
25GMK|1|E+ 5GMK|1|LU6 spliceosomal RNA + U2 splicesomal small nuclear RNA5'-Splicing Site, Intron_BPS, U2 snRNA, U6 snRNASaccharomyces cerevisiaeEukaryaRF00026 + RF00004Cryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolutionElectron microscopy3.42016-08-17
35LQW|1|6+ 5LQW|1|2U6 spliceosomal RNA + U2 splicesomal small nuclear RNAactin pre-mRNA, U2 snRNA, U6 snRNASaccharomyces cerevisiaeEukaryaRF00026 + RF00004yeast activated spliceosomeElectron microscopy5.82016-10-05

Release history

Release2.111
Date2017-01-20

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_56118.2NR_all_56118.12.111(2) 5GMK|1|E+5GMK|1|L, 5LQW|1|6+5LQW|1|2(1) 5MPS|1|6(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_56118.2NR_all_56118.32.112(3) 5GMK|1|E+5GMK|1|L, 5LQW|1|6+5LQW|1|2, 5MPS|1|6(0) (1) 5WSG|1|E

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
15GMK|1|E+ 5GMK|1|LCryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolutionELECTRON MICROSCOPY3.4103
25MPS|1|6Structure of a spliceosome remodeled for exon ligationELECTRON MICROSCOPY3.8599
35LQW|1|6+ 5LQW|1|2yeast activated spliceosomeELECTRON MICROSCOPY5.8102

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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