Equivalence class NR_all_60074.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7EZ2|1|N (rep) | Group I catalytic intron | Holo L-16 ScaI Tetrahymena ribozyme, Holo L-16 ScaI Tetrahymena ribozyme S1, Holo L-16 ScaI Tetrahymena ribozyme S2 | Tetrahymena thermophila | Eukarya | RF00028 | Holo L-16 ScaI Tetrahymena ribozyme | Electron microscopy | 3.05 | 2021-08-25 |
| 2 | 7EZ0|1|N | Group I catalytic intron | Apo L-21 ScaI Tetrahymena ribozyme | Tetrahymena thermophila | Eukarya | RF00028 | Apo L-21 ScaI Tetrahymena ribozyme | Electron microscopy | 3.14 | 2021-08-25 |
| 3 | 7R6L|1|A | Group I catalytic intron | Group I intron, 3 prime fragment plus 3 prime exon, Group I intron, 5 prime fragment | Tetrahymena thermophila | Eukarya | RF00028 | 5 prime exon-free pre-2S intermediate of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic dimeric construct | Electron microscopy | 2.85 | 2022-05-04 |
| 4 | 7R6M|1|A | Group I catalytic intron | Group I intron, Ligated exon mimic of the Group I intron | Tetrahymena thermophila | Eukarya | RF00028 | Post-2S intermediate of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic dimeric construct | Electron microscopy | 3.68 | 2022-05-04 |
| 5 | 7R6N|1|A | Group I catalytic intron | Group I intron | Tetrahymena thermophila | Eukarya | RF00028 | Exon-free state of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic trimeric construct | Electron microscopy | 4.1 | 2022-05-04 |
| 6 | 6WLS|11|A | Group I catalytic intron | RNA (388-MER) | Tetrahymena thermophila | Eukarya | RF00028 | Tetrahymena ribozyme models, 6.8 Angstrom resolution | Electron microscopy | 6.8 | 2020-07-08 |
Release history
Parents
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 7R6L|1|A | 5 prime exon-free pre-2S intermediate of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic dimeric construct | ELECTRON MICROSCOPY | 2.85 | 343 | |
| 2 | 7R6M|1|A | Post-2S intermediate of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic dimeric construct | ELECTRON MICROSCOPY | 3.68 | 356 | |
| 3 | 7EZ2|1|N | Holo L-16 ScaI Tetrahymena ribozyme | ELECTRON MICROSCOPY | 3.05 | 392 | |
| 4 | 7R6N|1|A | Exon-free state of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic trimeric construct | ELECTRON MICROSCOPY | 4.1 | 354 | |
| 5 | 7EZ0|1|N | Apo L-21 ScaI Tetrahymena ribozyme | ELECTRON MICROSCOPY | 3.14 | 387 | |
| 6 | 6WLS|11|A | Tetrahymena ribozyme models, 6.8 Angstrom resolution | ELECTRON MICROSCOPY | 6.8 | 388 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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