Equivalence class NR_all_61301.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4BOC|1|R (rep) | 5'-R(*AP*GP*UP*CP*UP*GP*CP*GP*GP*CP*GP*CP*GP*CP)-3' | synthetic construct | Structure of mitochondrial RNA polymerase elongation complex | X-ray diffraction | 2.65 | 9 | 2013-09-25 | |||
| 2 | 5OLA|1|H | RNA (5'-R(P*GP*CP*GP*GP*CP*GP*CP*GP*C)-3') | synthetic construct | Structure of mitochondrial transcription elongation complex in complex with elongation factor TEFM | X-ray diffraction | 3.9 | 9 | 2017-10-18 | |||
| 3 | 5OLA|1|R | RNA (5'-R(P*GP*CP*GP*GP*CP*GP*CP*GP*C)-3') | synthetic construct | Structure of mitochondrial transcription elongation complex in complex with elongation factor TEFM | X-ray diffraction | 3.9 | 9 | 2017-10-18 | |||
| 4 | 9BDC|1|R | RNA (RNA14mt) | synthetic construct | Cryo-EM Structure of the TEFM bound Human Mitochondrial Transcription Elongation Complex in a Closed Fingers Domain Conformation | Electron microscopy | 2.54 | 9 | 2024-09-04 | |||
| 5 | 8U8V|1|R | RNA (RNA14mt) | synthetic construct | Cryo-EM structure of Substrate ATP Bound in the Insertion Site (IS) of Human Mitochondrial Transcription Elongation Complex | Electron microscopy | 2.74 | 9 | 2024-09-04 | |||
| 6 | 9BDD|1|R | RNA (RNA14mt) | synthetic construct | Cryo-EM Structure of Non-Cognate Substrate Bound in the Entry Site (ES) of Human Mitochondrial Transcription Elongation Complex | Electron microscopy | 2.86 | 9 | 2024-09-04 | |||
| 7 | 8U8U|1|R | RNA (RNA14mt) | synthetic construct | Cryo-EM Structure of Cognate Substrate ATP Bound in the Entry Site (ES) of Human Mitochondrial Transcription Elongation Complex | Electron microscopy | 2.9 | 9 | 2024-09-04 |
Release history
| Release | 3.351 | 3.352 | 3.353 | 3.354 | 3.355 | 3.356 | 3.357 | 3.358 | 3.359 | 3.360 | 3.361 | 3.362 | 3.363 | 3.364 | 3.365 | 3.366 | 3.367 | 3.368 | 3.369 | 3.370 | 3.371 | 3.372 | 3.373 | 3.374 | 3.375 | 3.376 | 3.377 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-09-04 | 2024-09-11 | 2024-09-18 | 2024-09-25 | 2024-10-02 | 2024-10-09 | 2024-10-16 | 2024-10-23 | 2024-10-30 | 2024-11-06 | 2024-11-13 | 2024-11-20 | 2024-11-27 | 2024-12-04 | 2024-12-11 | 2024-12-18 | 2024-12-25 | 2025-01-01 | 2025-01-08 | 2025-01-15 | 2025-01-22 | 2025-01-29 | 2025-02-05 | 2025-02-12 | 2025-02-19 | 2025-02-26 | 2025-03-05 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 4BOC|1|R | Structure of mitochondrial RNA polymerase elongation complex | X-RAY DIFFRACTION | 2.65 | 9 | |
| 2 | 5OLA|1|R | Structure of mitochondrial transcription elongation complex in complex with elongation factor TEFM | X-RAY DIFFRACTION | 3.9 | 9 | |
| 3 | 5OLA|1|H | Structure of mitochondrial transcription elongation complex in complex with elongation factor TEFM | X-RAY DIFFRACTION | 3.9 | 9 | |
| 4 | 9BDC|1|R | Cryo-EM Structure of the TEFM bound Human Mitochondrial Transcription Elongation Complex in a Closed Fingers Domain Conformation | ELECTRON MICROSCOPY | 2.54 | 9 | |
| 5 | 9BDD|1|R | Cryo-EM Structure of Non-Cognate Substrate Bound in the Entry Site (ES) of Human Mitochondrial Transcription Elongation Complex | ELECTRON MICROSCOPY | 2.86 | 9 | |
| 6 | 8U8V|1|R | Cryo-EM structure of Substrate ATP Bound in the Insertion Site (IS) of Human Mitochondrial Transcription Elongation Complex | ELECTRON MICROSCOPY | 2.74 | 9 | |
| 7 | 8U8U|1|R | Cryo-EM Structure of Cognate Substrate ATP Bound in the Entry Site (ES) of Human Mitochondrial Transcription Elongation Complex | ELECTRON MICROSCOPY | 2.9 | 9 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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