Equivalence class NR_all_61644.2 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4X62|1|b+ 4X62|1|a (rep) | RNA (5'-D(*AP*AP*AP*UP*UP*U)-3'), RNA (5'-D(P*GP*AP*CP*UP*(70U)P*UP*UP*(12A)P*AP*(PSU)P*C)-3') | Thermus thermophilus | Crystal Structure of 30S ribosomal subunit from Thermus thermophilus | X-ray diffraction | 3.45 | 17 | 2015-11-18 | |||
| 2 | 4X64|1|b+ 4X64|1|a | RNA (5'-D(*(MA6)P*AP*AP*UP*UP*U)-3'), RNA (5'-D(P*GP*AP*CP*UP*(70U)P*UP*UP*(12A)P*AP*(PSU)P*C)-3') | Thermus thermophilus | Crystal Structure of 30S ribosomal subunit from Thermus thermophilus | X-ray diffraction | 3.35 | 17 | 2015-11-18 | |||
| 3 | 4X65|1|b+ 4X65|1|a | RNA (5'-D(*AP*(MA6)P*AP*UP*UP*U)-3'), RNA (5'-D(P*GP*AP*CP*UP*(70U)P*UP*UP*(12A)P*AP*(PSU)P*C)-3') | Thermus thermophilus | Crystal Structure of 30S ribosomal subunit from Thermus thermophilus | X-ray diffraction | 3.35 | 17 | 2015-11-18 | |||
| 4 | 4X66|1|b+ 4X66|1|a | RNA (5'-D(*AP*AP*(MA6)P*UP*UP*U)-3'), RNA (5'-D(P*GP*AP*CP*UP*(70U)P*UP*UP*(12A)P*AP*(PSU)P*C)-3') | Thermus thermophilus | Crystal Structure of 30S ribosomal subunit from Thermus thermophilus | X-ray diffraction | 3.45 | 17 | 2015-11-18 | |||
| 5 | 1XMQ|1|X+ 1XMQ|1|W | A-Site Messenger RNA, Anticodon RNA | Crystal Structure of t6A37-ASLLysUUU AAA-mRNA Bound to the Decoding Center | X-ray diffraction | 3 | 15 | 2004-12-14 | ||||
| 6 | 3T1H|1|X+ 3T1H|1|W | mRNA A-site fragment, tRNA ASL human Lys3 | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA lysine 3 (tRNALys3) bound to an mRNA with an AAA-codon in the A-site and Paromomycin | X-ray diffraction | 3.11 | 14 | 2012-01-25 | ||||
| 7 | 3T1Y|1|X | tRNA ASL human Lys3 | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA Lysine 3 (TRNALYS3) bound to an mRNA with an AAG-codon in the A-site and paromomycin | X-ray diffraction | 2.8 | 11 | 2012-01-25 | ||||
| 8 | 1XMO|1|X | Anticodon Transfer RNA | Crystal Structure of mnm5U34t6A37-tRNALysUUU Complexed with AAG-mRNA in the Decoding Center | X-ray diffraction | 3.25 | 11 | 2004-12-14 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 4X62|1|b+ 4X62|1|a | Crystal Structure of 30S ribosomal subunit from Thermus thermophilus | X-RAY DIFFRACTION | 3.45 | 17 | |
| 2 | 4X66|1|b+ 4X66|1|a | Crystal Structure of 30S ribosomal subunit from Thermus thermophilus | X-RAY DIFFRACTION | 3.45 | 17 | |
| 3 | 4X64|1|b+ 4X64|1|a | Crystal Structure of 30S ribosomal subunit from Thermus thermophilus | X-RAY DIFFRACTION | 3.35 | 17 | |
| 4 | 4X65|1|b+ 4X65|1|a | Crystal Structure of 30S ribosomal subunit from Thermus thermophilus | X-RAY DIFFRACTION | 3.35 | 17 | |
| 5 | 3T1Y|1|X | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA Lysine 3 (TRNALYS3) bound to an mRNA with an AAG-codon in the A-site and paromomycin | X-RAY DIFFRACTION | 2.8 | 11 | |
| 6 | 3T1H|1|X+ 3T1H|1|W | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA lysine 3 (tRNALys3) bound to an mRNA with an AAA-codon in the A-site and Paromomycin | X-RAY DIFFRACTION | 3.11 | 14 | |
| 7 | 1XMO|1|X | Crystal Structure of mnm5U34t6A37-tRNALysUUU Complexed with AAG-mRNA in the Decoding Center | X-RAY DIFFRACTION | 3.25 | 11 | |
| 8 | 1XMQ|1|X+ 1XMQ|1|W | Crystal Structure of t6A37-ASLLysUUU AAA-mRNA Bound to the Decoding Center | X-RAY DIFFRACTION | 3 | 15 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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