Equivalence class NR_all_62041.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2JYH|1|B (rep) | RNA (43-MER) | Rigid-body refinement of the tetraloop-receptor RNA complex | Solution NMR | 43 | 2008-10-07 | |||||
| 2 | 2JYH|1|A | RNA (43-MER) | Rigid-body refinement of the tetraloop-receptor RNA complex | Solution NMR | 43 | 2008-10-07 | |||||
| 3 | 2ADT|1|A | 43-MER | NMR structure of a 30 kDa GAAA tetraloop-receptor complex. | Solution NMR | 43 | 2005-07-26 | |||||
| 4 | 2I7E|1|A | 43-MER | GAAA tetralooop receptor complex with associated cobalt hexammine. | Solution NMR | 43 | 2007-04-03 | |||||
| 5 | 2I7Z|1|A | 43-MER | GAAA tetraloop receptor complex with associated manganese ions. | Solution NMR | 43 | 2007-04-03 | |||||
| 6 | 2ADT|1|B | 43-MER | NMR structure of a 30 kDa GAAA tetraloop-receptor complex. | Solution NMR | 43 | 2005-07-26 | |||||
| 7 | 2I7E|1|B | 43-MER | GAAA tetralooop receptor complex with associated cobalt hexammine. | Solution NMR | 43 | 2007-04-03 | |||||
| 8 | 2I7Z|1|B | 43-MER | GAAA tetraloop receptor complex with associated manganese ions. | Solution NMR | 43 | 2007-04-03 | |||||
| 9 | 2JYJ|2|A | RNA (43-MER) | Re-refining the tetraloop-receptor RNA-RNA complex using NMR-derived restraints and Xplor-nih (2.18) | Solution NMR | 43 | 2008-10-07 | |||||
| 10 | 2JYF|3|A | RNA (43-MER) | Tetraloop-receptor RNA complex | Solution NMR | 43 | 2008-10-07 | |||||
| 11 | 2JYJ|2|B | RNA (43-MER) | Re-refining the tetraloop-receptor RNA-RNA complex using NMR-derived restraints and Xplor-nih (2.18) | Solution NMR | 43 | 2008-10-07 | |||||
| 12 | 2JYF|3|B | RNA (43-MER) | Tetraloop-receptor RNA complex | Solution NMR | 43 | 2008-10-07 |
Release history
| Release | 2.0 | 2.1 | 2.2 | 2.3 | 2.4 | 2.5 | 2.6 | 2.7 | 2.8 | 2.9 | 2.10 | 2.11 | 2.12 | 2.13 | 2.14 | 2.15 | 2.16 | 2.17 | 2.18 | 2.19 | 2.20 | 2.21 | 2.22 | 2.23 | 2.24 | 2.25 | 2.26 | 2.27 | 2.28 | 2.29 | 2.30 | 2.31 | 2.32 | 2.33 | 2.34 | 2.35 | 2.36 | 2.37 | 2.38 | 2.39 | 2.40 | 2.41 | 2.42 | 2.43 | 2.44 | 2.45 | 2.46 | 2.47 | 2.48 | 2.49 | 2.50 | 2.51 | 2.52 | 2.53 | 2.54 | 2.55 | 2.56 | 2.57 | 2.58 | 2.59 | 2.60 | 2.61 | 2.62 | 2.63 | 2.64 | 2.65 | 2.66 | 2.67 | 2.68 | 2.69 | 2.70 | 2.71 | 2.72 | 2.73 | 2.74 | 2.75 | 2.76 | 2.77 | 2.78 | 2.79 | 2.80 | 2.81 | 2.82 | 2.83 | 2.84 | 2.85 | 2.86 | 2.87 | 2.88 | 2.89 | 2.90 | 2.91 | 2.92 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2014-12-05 | 2014-12-12 | 2014-12-19 | 2014-12-26 | 2015-01-02 | 2015-01-09 | 2015-01-16 | 2015-01-23 | 2015-01-30 | 2015-02-06 | 2015-02-13 | 2015-02-20 | 2015-02-27 | 2015-03-06 | 2015-03-13 | 2015-03-20 | 2015-03-27 | 2015-04-03 | 2015-04-10 | 2015-04-17 | 2015-04-24 | 2015-05-01 | 2015-05-08 | 2015-05-15 | 2015-05-22 | 2015-05-29 | 2015-06-05 | 2015-06-12 | 2015-06-19 | 2015-06-26 | 2015-07-03 | 2015-07-10 | 2015-07-17 | 2015-07-24 | 2015-07-31 | 2015-08-07 | 2015-08-14 | 2015-08-21 | 2015-08-28 | 2015-09-04 | 2015-09-11 | 2015-09-18 | 2015-09-25 | 2015-10-02 | 2015-10-09 | 2015-10-16 | 2015-10-23 | 2015-10-30 | 2015-11-06 | 2015-11-13 | 2015-11-20 | 2015-11-27 | 2015-12-04 | 2015-12-11 | 2015-12-18 | 2015-12-25 | 2016-01-01 | 2016-01-08 | 2016-01-15 | 2016-01-22 | 2016-01-29 | 2016-02-05 | 2016-02-12 | 2016-02-19 | 2016-02-26 | 2016-03-04 | 2016-03-11 | 2016-03-18 | 2016-03-25 | 2016-04-01 | 2016-04-08 | 2016-04-15 | 2016-04-22 | 2016-04-29 | 2016-05-06 | 2016-05-13 | 2016-05-20 | 2016-05-27 | 2016-06-03 | 2016-06-10 | 2016-06-17 | 2016-06-24 | 2016-07-01 | 2016-07-08 | 2016-07-15 | 2016-07-22 | 2016-07-29 | 2016-08-05 | 2016-08-12 | 2016-08-19 | 2016-08-26 | 2016-09-02 | 2016-09-09 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_62041.1 | NR_all_06706.1 | 2.93 | (4) 2JYH|1|A, 2JYH|1|B, 2JYJ|2|A, 2JYJ|2|B | (8) 2ADT|1|A, 2ADT|1|B, 2I7E|1|A, 2I7E|1|B, 2I7Z|1|A, 2I7Z|1|B, 2JYF|3|A, 2JYF|3|B | (0) |
| NR_all_62041.1 | NR_all_37036.1 | 2.93 | (2) 2JYF|3|A, 2JYF|3|B | (10) 2ADT|1|A, 2ADT|1|B, 2I7E|1|A, 2I7E|1|B, 2I7Z|1|A, 2I7Z|1|B, 2JYH|1|A, 2JYH|1|B, 2JYJ|2|A, 2JYJ|2|B | (0) |
| NR_all_62041.1 | NR_all_50005.1 | 2.93 | (6) 2ADT|1|A, 2ADT|1|B, 2I7E|1|A, 2I7E|1|B, 2I7Z|1|A, 2I7Z|1|B | (6) 2JYF|3|A, 2JYF|3|B, 2JYH|1|A, 2JYH|1|B, 2JYJ|2|A, 2JYJ|2|B | (0) |
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 2I7E|1|B | GAAA tetralooop receptor complex with associated cobalt hexammine. | SOLUTION NMR | 43 | ||
| 2 | 2ADT|1|B | NMR structure of a 30 kDa GAAA tetraloop-receptor complex. | SOLUTION NMR | 43 | ||
| 3 | 2ADT|1|A | NMR structure of a 30 kDa GAAA tetraloop-receptor complex. | SOLUTION NMR | 43 | ||
| 4 | 2I7E|1|A | GAAA tetralooop receptor complex with associated cobalt hexammine. | SOLUTION NMR | 43 | ||
| 5 | 2I7Z|1|A | GAAA tetraloop receptor complex with associated manganese ions. | SOLUTION NMR | 43 | ||
| 6 | 2I7Z|1|B | GAAA tetraloop receptor complex with associated manganese ions. | SOLUTION NMR | 43 | ||
| 7 | 2JYJ|2|A | Re-refining the tetraloop-receptor RNA-RNA complex using NMR-derived restraints and Xplor-nih (2.18) | SOLUTION NMR | 43 | ||
| 8 | 2JYJ|2|B | Re-refining the tetraloop-receptor RNA-RNA complex using NMR-derived restraints and Xplor-nih (2.18) | SOLUTION NMR | 43 | ||
| 9 | 2JYH|1|A | Rigid-body refinement of the tetraloop-receptor RNA complex | SOLUTION NMR | 43 | ||
| 10 | 2JYH|1|B | Rigid-body refinement of the tetraloop-receptor RNA complex | SOLUTION NMR | 43 | ||
| 11 | 2JYF|3|B | Tetraloop-receptor RNA complex | SOLUTION NMR | 43 | ||
| 12 | 2JYF|3|A | Tetraloop-receptor RNA complex | SOLUTION NMR | 43 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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