#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
13J92|1|7 (rep)5S ribosomal RNA5S rRNAOryctolagus cuniculusEukaryaRF00001Structure and assembly pathway of the ribosome quality control complexElectron microscopy3.62015-01-21
23JAN|1|75S ribosomal RNA5S ribosomal RNAOryctolagus cuniculusEukaryaRF00001Structure of the scanning state of the mammalian SRP-ribosome complexElectron microscopy3.752015-08-05
33JAJ|1|75S ribosomal RNA5S ribosomal RNAOryctolagus cuniculusEukaryaRF00001Structure of the engaged state of the mammalian SRP-ribosome complexElectron microscopy3.752015-08-05
44D67|1|45S ribosomal RNA5S RRNAOryctolagus cuniculusEukaryaRF00001Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated stateElectron microscopy92015-03-04
54D5Y|1|45S ribosomal RNA5S Ribosomal RNAOryctolagus cuniculusEukaryaRF00001Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated stateElectron microscopy92015-03-04
64UJC|1|A45S ribosomal RNA5S RIBOSOMAL RNAOryctolagus cuniculusEukaryaRF00001mammalian 80S HCV-IRES initiation complex with eIF5B POST-like stateElectron microscopy9.52014-07-30
74UJD|1|A45S ribosomal RNA5S Ribosomal RNAOryctolagus cuniculusEukaryaRF00001mammalian 80S HCV-IRES initiation complex with eIF5B PRE-like stateElectron microscopy8.92014-07-30
84UJE|1|A45S ribosomal RNA5S Ribosomal RNAOryctolagus cuniculusEukaryaRF00001Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangementElectron microscopy6.92014-07-16

Release history

Release2.35
Date2015-08-07

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_66238.4NR_all_66238.32.35(6) 3J92|1|7, 4D5Y|1|4, 4D67|1|4, 4UJC|1|A4, 4UJD|1|A4, 4UJE|1|A4(2) 3JAJ|1|7, 3JAN|1|7(0)

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
14D67|1|4Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated stateELECTRON MICROSCOPY9119
24D5Y|1|4Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated stateELECTRON MICROSCOPY9119
34UJC|1|A4mammalian 80S HCV-IRES initiation complex with eIF5B POST-like stateELECTRON MICROSCOPY9.5119
44UJD|1|A4mammalian 80S HCV-IRES initiation complex with eIF5B PRE-like stateELECTRON MICROSCOPY8.9119
54UJE|1|A4Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangementELECTRON MICROSCOPY6.9119
63J92|1|7Structure and assembly pathway of the ribosome quality control complexELECTRON MICROSCOPY3.6120
73JAJ|1|7Structure of the engaged state of the mammalian SRP-ribosome complexELECTRON MICROSCOPY3.75120
83JAN|1|7Structure of the scanning state of the mammalian SRP-ribosome complexELECTRON MICROSCOPY3.75120

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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