#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18AUV|1|h (rep)Small subunit ribosomal RNA18S rRNANicotiana tabacumEukaryaRF01960Cryo-EM structure of the plant 40S subunitElectron microscopy2.382023-06-07
27QIZ|1|S2Small subunit ribosomal RNA18SSolanum lycopersicumEukaryaRF01960Specific features and methylation sites of a plant 80S ribosomeElectron microscopy2.382022-08-03
37QIX|1|2Small subunit ribosomal RNA18S rRNA bodySolanum lycopersicumEukaryaRF01960Specific features and methylation sites of a plant ribosome. 40S body ribosomal subunit.Electron microscopy2.532022-06-15
44V7E|1|AdSmall subunit ribosomal RNA18S ribosomal RNATriticum aestivumEukaryaRF01960Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosomeElectron microscopy5.52014-07-09

Release history

Release3.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.296
Date2023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-16

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_87525.3NR_all_87525.23.286(3) 4V7E|1|Ad, 7QIX|1|2, 7QIZ|1|S2(1) 8AUV|1|h(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_87525.3NR_all_87525.43.297(4) 4V7E|1|Ad, 7QIX|1|2, 7QIZ|1|S2, 8AUV|1|h(0) (1) 8B2L|1|h1

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
17QIX|1|2Specific features and methylation sites of a plant ribosome. 40S body ribosomal subunit.ELECTRON MICROSCOPY2.531060
27QIZ|1|S2Specific features and methylation sites of a plant 80S ribosomeELECTRON MICROSCOPY2.381507
38AUV|1|hCryo-EM structure of the plant 40S subunitELECTRON MICROSCOPY2.381545
44V7E|1|AdModel of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosomeELECTRON MICROSCOPY5.51762

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

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