#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16FYY|1|1 (rep)Transfer RNAmRNA (31-MER), tRNAiSaccharomyces cerevisiaeEukaryaRF00005Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2)Electron microscopy3.022018-12-05
28CAS|1|1Transfer RNAmRNA, tRNASaccharomyces cerevisiae W303EukaryaRF00005Cryo-EM structure of native Otu2-bound ubiquitinated 48S initiation complex (partial)Electron microscopy3.32023-05-24
36FYX|1|1Transfer RNAmRNA (31-MER), tRNAiSaccharomyces cerevisiaeEukaryaRF00005Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1)Electron microscopy3.52018-12-05
43J81|1|1Met-tRNAi, mRNACryoEM structure of a partial yeast 48S preinitiation complexElectron microscopy42014-11-05
56GSM|1|1Transfer RNAMet-tRNAi, mRNA (5'-R(P*AP*AP*U)-3')Saccharomyces cerevisiaeEukaryaRF00005Structure of a partial yeast 48S preinitiation complex in open conformationElectron microscopy5.152019-07-31
66GSN|1|1Transfer RNAmRNA, tRNAi (75-MER)Saccharomyces cerevisiaeEukaryaRF00005Structure of a partial yeast 48S preinitiation complex in closed conformationElectron microscopy5.752019-06-26
76ZU9|1|1Transfer RNAmRNA, tRNASaccharomyces cerevisiaeEukaryaRF00005Structure of a yeast ABCE1-bound 48S initiation complexElectron microscopy6.22020-10-28

Release history

Release3.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.3323.3333.3343.3353.3363.3373.3383.3393.3403.3413.3423.3433.3443.3453.3463.3473.3483.3493.3503.351
Date2023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-242024-05-012024-05-082024-05-152024-05-222024-05-292024-06-052024-06-122024-06-192024-06-262024-07-032024-07-102024-07-172024-07-252024-07-312024-08-072024-08-142024-08-212024-08-282024-09-04

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_99632.9NR_all_99632.83.284(6) 3J81|1|1, 6FYX|1|1, 6FYY|1|1, 6GSM|1|1, 6GSN|1|1, 6ZU9|1|1(1) 8CAS|1|1(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
16GSM|1|1Structure of a partial yeast 48S preinitiation complex in open conformationELECTRON MICROSCOPY5.1564
28CAS|1|1Cryo-EM structure of native Otu2-bound ubiquitinated 48S initiation complex (partial)ELECTRON MICROSCOPY3.364
36FYX|1|1Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1)ELECTRON MICROSCOPY3.564
46ZU9|1|1Structure of a yeast ABCE1-bound 48S initiation complexELECTRON MICROSCOPY6.264
56FYY|1|1Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2)ELECTRON MICROSCOPY3.0264
66GSN|1|1Structure of a partial yeast 48S preinitiation complex in closed conformationELECTRON MICROSCOPY5.7575
73J81|1|1CryoEM structure of a partial yeast 48S preinitiation complexELECTRON MICROSCOPY474

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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