IL_2AW7_065

3D structure

PDB id

2AW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. This file contains the 30S subunit of the second 70S ribosome. The entire crystal structure contains two 70S ribosomes and is described in remark 400.

Experimental method

X-RAY DIFFRACTION

Resolution

3.46 Å

Loop

Sequence

GGAG*UGAC

Length

8 nucleotides

Bulged bases (A, C, G, U)

None detected

QA status

Missing nucleotides: 1416, 1417, 1418, 1419, 1481, 1482, 1483, 1484

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_13959.8

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

39

Unit IDs

2AW7|1|A|G|1416
2AW7|1|A|G|1417
2AW7|1|A|A|1418
2AW7|1|A|G|1419
*
2AW7|1|A|U|1481
2AW7|1|A|G|1482
2AW7|1|A|A|1483
2AW7|1|A|C|1484

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain L

30S ribosomal protein S12