3D structure

PDB id
2OE5 (explore in BGSU RNA Site or PDB)
Description
1.5 A X-ray crystal structure of Apramycin complex with RNA fragment GGCGUCGCUAGUACCG/GGUACUAAAAGUCGCCC containing the human ribosomal decoding A site: RNA construct with 3'-overhang
Experimental method
X-RAY DIFFRACTION
Resolution
1.51 Å
Representative set classes
NR_2.0_73746.1, NR_2.5_73746.1, NR_20.0_73746.1, NR_3.0_73746.1, NR_3.5_73746.1, NR_4.0_73746.1, NR_all_73746.1

Loop

Sequence
CGCU*AAAAG
Length
9 nucleotides
Bulged bases
1491A
QA status
Valid loop

Motif assignment

Motif group
IL_35049.1
Common name
cWS plus stacked base
Basepair signature
cWW-cSW-L-R-cWW
Number of instances
6

Nearby proteins

No proteins within 16Å