IL_6W6P_046
3D structure
- PDB id
- 6W6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MultiBody Refinement of 70S Ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AUGAGUAG*UGAAAUU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6W6P_046 not in the Motif Atlas
- Homologous match to IL_4WF9_048
- Geometric discrepancy: 0.0954
- The information below is about IL_4WF9_048
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
6W6P|1|A|A|1299
6W6P|1|A|U|1300
6W6P|1|A|G|1301
6W6P|1|A|A|1302
6W6P|1|A|G|1303
6W6P|1|A|U|1304
6W6P|1|A|A|1305
6W6P|1|A|G|1306
*
6W6P|1|A|U|2025
6W6P|1|A|G|2026
6W6P|1|A|A|2027
6W6P|1|A|A|2028
6W6P|1|A|A|2029
6W6P|1|A|U|2030
6W6P|1|A|U|2031
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L32
- Chain E
- 50S ribosomal protein L4
- Chain T
- 50S ribosomal protein L22
Coloring options: